RNA–Protein interactions for RNA: ENST00000357048.8

CAPN10-205, Transcript of calpain 10, humanhuman

TSL 1 (best)

Gene CAPN10, Length 2,202 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN10-205ENST00000357048 NISCHQ9Y2I1 1504 aa41.06■■■■■ 4.16
CAPN10-205ENST00000357048 CCDC180Q9P1Z9 1646 aa36.34■■■■□ 3.41
CAPN10-205ENST00000357048 ABCC9O60706 1549 aa35.64■■■■□ 3.3
CAPN10-205ENST00000357048 DCAF8L2P0C7V8 631 aa34.53■■■■□ 3.12
CAPN10-205ENST00000357048 ZCCHC6Q5VYS8 1495 aaKnown RBP34.21■■■■□ 3.07
CAPN10-205ENST00000357048 RB1CC1Q8TDY2 1594 aa34.21■■■■□ 3.07
CAPN10-205ENST00000357048 NACADO15069 1562 aa34.18■■■■□ 3.06
CAPN10-205ENST00000357048 MYO15BQ96JP2 1530 aa33.94■■■■□ 3.02
CAPN10-205ENST00000357048 DCAF1Q9Y4B6 1507 aa33.87■■■■□ 3.01
CAPN10-205ENST00000357048 SHROOM4Q9ULL8 1493 aa33.51■■■□□ 2.96
CAPN10-205ENST00000357048 UNC13AQ9UPW8 1703 aa33.46■■■□□ 2.95
CAPN10-205ENST00000357048 PABPN1Q86U42 306 aaKnown RBP eCLIP33.41■■■□□ 2.94
CAPN10-205ENST00000357048 SCRIBQ14160 1630 aa33.33■■■□□ 2.93
CAPN10-205ENST00000357048 BICRAQ9NZM4 1560 aa33.19■■■□□ 2.9
CAPN10-205ENST00000357048 SUPT5HO00267 1087 aaKnown RBP33.07■■■□□ 2.88
CAPN10-205ENST00000357048 DNAJC5BQ9UF47 199 aa32.63■■■□□ 2.81
CAPN10-205ENST00000357048 CHIC1Q5VXU3 224 aa32.47■■■□□ 2.79
CAPN10-205ENST00000357048 EIF4G1Q04637 1599 aaKnown RBP32.31■■■□□ 2.76
CAPN10-205ENST00000357048 CC2D2AQ9P2K1 1620 aa32.17■■■□□ 2.74
CAPN10-205ENST00000357048 HRCP23327 699 aa32.16■■■□□ 2.74
CAPN10-205ENST00000357048 CECR2Q9BXF3 1484 aa32.05■■■□□ 2.72
CAPN10-205ENST00000357048 SMARCA4P51532 1647 aa31.82■■■□□ 2.68
CAPN10-205ENST00000357048 BAZ1AQ9NRL2 1556 aaPredicted RBP31.8■■■□□ 2.68
CAPN10-205ENST00000357048 PCGF6Q9BYE7 350 aa31.77■■■□□ 2.68
CAPN10-205ENST00000357048 MROH2BQ7Z745 1585 aa31.7■■■□□ 2.66
CAPN10-205ENST00000357048 ATAD2BQ9ULI0 1458 aa31.64■■■□□ 2.66
CAPN10-205ENST00000357048 NCAPD3P42695 1498 aa31.57■■■□□ 2.64
CAPN10-205ENST00000357048 SMARCA2P51531 1590 aa31.56■■■□□ 2.64
CAPN10-205ENST00000357048 PEG3Q9GZU2 1588 aa31.44■■■□□ 2.62
CAPN10-205ENST00000357048 LOC105371045A0A1W2PR82 267 aa31.43■■■□□ 2.62
CAPN10-205ENST00000357048 BAZ1BQ9UIG0 1483 aaKnown RBP31.4■■■□□ 2.62
CAPN10-205ENST00000357048 RSF1Q96T23 1441 aaPredicted RBP31.38■■■□□ 2.61
CAPN10-205ENST00000357048 HMGXB3Q12766 1538 aa31.38■■■□□ 2.61
CAPN10-205ENST00000357048 WIZO95785 1651 aa31.38■■■□□ 2.61
CAPN10-205ENST00000357048 PPARGC1BQ86YN6 1023 aaKnown RBP31.28■■■□□ 2.6
CAPN10-205ENST00000357048 TRIM26Q12899 539 aaPredicted RBP31.2■■■□□ 2.59
CAPN10-205ENST00000357048 TOP2AP11388 1531 aaKnown RBP30.97■■■□□ 2.55
CAPN10-205ENST00000357048 NESP48681 1621 aa30.88■■■□□ 2.53
CAPN10-205ENST00000357048 TRIM41Q8WV44 630 aa30.86■■■□□ 2.53
CAPN10-205ENST00000357048 ZEB1P37275 1124 aaPredicted RBP30.76■■■□□ 2.51
CAPN10-205ENST00000357048 CADPSQ9ULU8 1353 aa30.7■■■□□ 2.51
CAPN10-205ENST00000357048 LAMC3Q9Y6N6 1575 aa30.7■■■□□ 2.5
CAPN10-205ENST00000357048 ERCC6Q03468 1493 aa30.69■■■□□ 2.5
CAPN10-205ENST00000357048 CCDC88BA6NC98 1476 aa30.68■■■□□ 2.5
CAPN10-205ENST00000357048 PDS5BQ9NTI5 1447 aa30.54■■■□□ 2.48
CAPN10-205ENST00000357048 CFTRP13569 1480 aa30.52■■■□□ 2.48
CAPN10-205ENST00000357048 FAM9AQ8IZU1 332 aaPredicted RBP30.5■■■□□ 2.47
CAPN10-205ENST00000357048 KIF21AQ7Z4S6 1674 aa30.45■■■□□ 2.47
CAPN10-205ENST00000357048 FANCD2Q9BXW9 1451 aa30.36■■■□□ 2.45
CAPN10-205ENST00000357048 CEP164Q9UPV0 1460 aa30.29■■■□□ 2.44
CAPN10-205ENST00000357048 THOC2Q8NI27 1593 aaKnown RBP30.26■■■□□ 2.43
CAPN10-205ENST00000357048 PRDM2Q13029 1718 aa30.22■■■□□ 2.43
CAPN10-205ENST00000357048 MRC2Q9UBG0 1479 aa30.2■■■□□ 2.42
CAPN10-205ENST00000357048 CUX2O14529 1486 aa30.19■■■□□ 2.42
CAPN10-205ENST00000357048 EHMT2Q96KQ7 1210 aa30.13■■■□□ 2.41
CAPN10-205ENST00000357048 WDR62O43379 1518 aa30.06■■■□□ 2.4
CAPN10-205ENST00000357048 URB2Q14146 1524 aaKnown RBP30.04■■■□□ 2.4
CAPN10-205ENST00000357048 TOPBP1Q92547 1522 aa29.87■■■□□ 2.37
CAPN10-205ENST00000357048 PELP1Q8IZL8 1130 aaKnown RBP29.83■■■□□ 2.37
CAPN10-205ENST00000357048 WRNQ14191 1432 aaPredicted RBP eCLIP29.83■■■□□ 2.37
CAPN10-205ENST00000357048 ABCC8Q09428 1581 aa29.82■■■□□ 2.36
CAPN10-205ENST00000357048 SCAF1Q9H7N4 1312 aaKnown RBP29.81■■■□□ 2.36
CAPN10-205ENST00000357048 DNMBPQ6XZF7 1577 aa29.81■■■□□ 2.36
CAPN10-205ENST00000357048 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP29.75■■■□□ 2.35
CAPN10-205ENST00000357048 CCER1Q8TC90 406 aaPredicted RBP29.74■■■□□ 2.35
CAPN10-205ENST00000357048 CUX1P39880 1505 aa29.71■■■□□ 2.35
CAPN10-205ENST00000357048 CEP162Q5TB80 1403 aa29.66■■■□□ 2.34
CAPN10-205ENST00000357048 POLA1P09884 1462 aaPredicted RBP29.64■■■□□ 2.34
CAPN10-205ENST00000357048 TNIKQ9UKE5 1360 aa29.63■■■□□ 2.33
CAPN10-205ENST00000357048 IFT140Q96RY7 1462 aa29.62■■■□□ 2.33
CAPN10-205ENST00000357048 EEA1Q15075 1411 aa29.62■■■□□ 2.33
CAPN10-205ENST00000357048 FGD5Q6ZNL6 1462 aa29.6■■■□□ 2.33
CAPN10-205ENST00000357048 RAD54L2Q9Y4B4 1467 aa29.57■■■□□ 2.32
CAPN10-205ENST00000357048 SOGA1O94964 1423 aa29.56■■■□□ 2.32
CAPN10-205ENST00000357048 ZNF608Q9ULD9 1512 aaPredicted RBP29.56■■■□□ 2.32
CAPN10-205ENST00000357048 TARBP1Q13395 1621 aaKnown RBP29.51■■■□□ 2.31
CAPN10-205ENST00000357048 SYNJ1O43426 1573 aa29.5■■■□□ 2.31
CAPN10-205ENST00000357048 ACIN1Q9UKV3 1341 aaKnown RBP29.46■■■□□ 2.31
CAPN10-205ENST00000357048 CSRNP3Q8WYN3 585 aa29.46■■■□□ 2.31
CAPN10-205ENST00000357048 TOP2BQ02880 1626 aa29.45■■■□□ 2.31
CAPN10-205ENST00000357048 AQRO60306 1485 aaKnown RBP eCLIP29.44■■■□□ 2.35e-8■■■■■ 30.3
CAPN10-205ENST00000357048 TDRD9Q8NDG6 1382 aaKnown RBP29.43■■■□□ 2.3
CAPN10-205ENST00000357048 BIVM-ERCC5R4GMW8 1640 aa29.42■■■□□ 2.3
CAPN10-205ENST00000357048 DIEXFQ68CQ4 756 aaKnown RBP29.41■■■□□ 2.3
CAPN10-205ENST00000357048 EIF4G3O43432 1585 aaKnown RBP29.39■■■□□ 2.29
CAPN10-205ENST00000357048 RUSC2Q8N2Y8 1516 aa29.38■■■□□ 2.29
CAPN10-205ENST00000357048 GOLGA3Q08378 1498 aa29.38■■■□□ 2.29
CAPN10-205ENST00000357048 NEUROD1Q13562 356 aa29.33■■■□□ 2.29
CAPN10-205ENST00000357048 UBTFP17480 764 aaKnown RBP29.3■■■□□ 2.28
CAPN10-205ENST00000357048 TTBK1Q5TCY1 1321 aaPredicted RBP29.3■■■□□ 2.28
CAPN10-205ENST00000357048 ABCA10Q8WWZ4 1543 aa29.27■■■□□ 2.28
CAPN10-205ENST00000357048 CENPBP07199 599 aaPredicted RBP29.25■■■□□ 2.27
CAPN10-205ENST00000357048 WDR97A6NE52 1622 aa29.25■■■□□ 2.27
CAPN10-205ENST00000357048 DNAJC5Q9H3Z4 198 aa29.22■■■□□ 2.27
CAPN10-205ENST00000357048 GAPVD1Q14C86 1478 aa29.2■■■□□ 2.26
CAPN10-205ENST00000357048 KIF21BO75037 1637 aa29.19■■■□□ 2.26
CAPN10-205ENST00000357048 FBLN2P98095 1184 aa29.16■■■□□ 2.26
CAPN10-205ENST00000357048 GRIN2BQ13224 1484 aa29.14■■■□□ 2.26
CAPN10-205ENST00000357048 ZNF316A6NFI3 1004 aaPredicted RBP29.13■■■□□ 2.25
CAPN10-205ENST00000357048 ABCA5Q8WWZ7 1642 aa29.12■■■□□ 2.25
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms