RNA–Protein interactions for RNA: ENST00000474287.5

TF-208, Transcript of transferrin, humanhuman

TSL 2

Gene TF, Length 645 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TF-208ENST00000474287 NISCHQ9Y2I1 1504 aa43.4■■■■■ 4.54
TF-208ENST00000474287 CCDC180Q9P1Z9 1646 aa38.79■■■■□ 3.8
TF-208ENST00000474287 ABCC9O60706 1549 aa38.22■■■■□ 3.71
TF-208ENST00000474287 RB1CC1Q8TDY2 1594 aa36.64■■■■□ 3.46
TF-208ENST00000474287 NACADO15069 1562 aa36.5■■■■□ 3.43
TF-208ENST00000474287 DCAF8L2P0C7V8 631 aa36.36■■■■□ 3.41
TF-208ENST00000474287 MYO15BQ96JP2 1530 aa36.15■■■■□ 3.38
TF-208ENST00000474287 ZCCHC6Q5VYS8 1495 aaKnown RBP36.1■■■■□ 3.37
TF-208ENST00000474287 UNC13AQ9UPW8 1703 aa35.88■■■■□ 3.34
TF-208ENST00000474287 DCAF1Q9Y4B6 1507 aa35.88■■■■□ 3.33
TF-208ENST00000474287 PABPN1Q86U42 306 aaKnown RBP eCLIP35.62■■■■□ 3.29
TF-208ENST00000474287 BICRAQ9NZM4 1560 aa35.54■■■■□ 3.28
TF-208ENST00000474287 SCRIBQ14160 1630 aa35.38■■■■□ 3.25
TF-208ENST00000474287 DNAJC5BQ9UF47 199 aa35.31■■■■□ 3.24
TF-208ENST00000474287 SHROOM4Q9ULL8 1493 aa35.12■■■■□ 3.21
TF-208ENST00000474287 EIF4G1Q04637 1599 aaKnown RBP34.64■■■■□ 3.14
TF-208ENST00000474287 CC2D2AQ9P2K1 1620 aa34.59■■■■□ 3.13
TF-208ENST00000474287 CECR2Q9BXF3 1484 aa34.37■■■■□ 3.09
TF-208ENST00000474287 SMARCA4P51532 1647 aa33.79■■■■□ 3
TF-208ENST00000474287 BAZ1AQ9NRL2 1556 aaPredicted RBP33.68■■■□□ 2.98
TF-208ENST00000474287 NCAPD3P42695 1498 aa33.65■■■□□ 2.98
TF-208ENST00000474287 ATAD2BQ9ULI0 1458 aa33.63■■■□□ 2.97
TF-208ENST00000474287 SMARCA2P51531 1590 aa33.6■■■□□ 2.97
TF-208ENST00000474287 HMGXB3Q12766 1538 aa33.5■■■□□ 2.95
TF-208ENST00000474287 MROH2BQ7Z745 1585 aa33.46■■■□□ 2.95
TF-208ENST00000474287 PEG3Q9GZU2 1588 aa33.43■■■□□ 2.94
TF-208ENST00000474287 BAZ1BQ9UIG0 1483 aaKnown RBP33.37■■■□□ 2.93
TF-208ENST00000474287 WIZO95785 1651 aa33.12■■■□□ 2.89
TF-208ENST00000474287 NESP48681 1621 aa32.99■■■□□ 2.87
TF-208ENST00000474287 ERCC6Q03468 1493 aa32.98■■■□□ 2.87
TF-208ENST00000474287 RSF1Q96T23 1441 aaPredicted RBP32.93■■■□□ 2.86
TF-208ENST00000474287 LAMC3Q9Y6N6 1575 aa32.87■■■□□ 2.85
TF-208ENST00000474287 CUX2O14529 1486 aa32.74■■■□□ 2.83
TF-208ENST00000474287 TOP2AP11388 1531 aaKnown RBP32.72■■■□□ 2.83
TF-208ENST00000474287 CADPSQ9ULU8 1353 aa32.65■■■□□ 2.82
TF-208ENST00000474287 KIF21AQ7Z4S6 1674 aa32.65■■■□□ 2.82
TF-208ENST00000474287 PDS5BQ9NTI5 1447 aa32.61■■■□□ 2.81
TF-208ENST00000474287 THOC2Q8NI27 1593 aaKnown RBP32.6■■■□□ 2.81
TF-208ENST00000474287 CFTRP13569 1480 aa32.4■■■□□ 2.78
TF-208ENST00000474287 MRC2Q9UBG0 1479 aa32.33■■■□□ 2.77
TF-208ENST00000474287 FANCD2Q9BXW9 1451 aa32.31■■■□□ 2.76
TF-208ENST00000474287 CEP164Q9UPV0 1460 aa32.31■■■□□ 2.76
TF-208ENST00000474287 CCDC88BA6NC98 1476 aa32.3■■■□□ 2.76
TF-208ENST00000474287 PRDM2Q13029 1718 aa32.25■■■□□ 2.75
TF-208ENST00000474287 WDR62O43379 1518 aa32.25■■■□□ 2.75
TF-208ENST00000474287 DNAJC5Q9H3Z4 198 aa32.05■■■□□ 2.72
TF-208ENST00000474287 URB2Q14146 1524 aaKnown RBP32.02■■■□□ 2.72
TF-208ENST00000474287 SUPT5HO00267 1087 aaKnown RBP31.84■■■□□ 2.69
TF-208ENST00000474287 TOPBP1Q92547 1522 aa31.76■■■□□ 2.68
TF-208ENST00000474287 ABCC8Q09428 1581 aa31.72■■■□□ 2.67
TF-208ENST00000474287 DNMBPQ6XZF7 1577 aa31.72■■■□□ 2.67
TF-208ENST00000474287 IFT140Q96RY7 1462 aa31.63■■■□□ 2.65
TF-208ENST00000474287 ZNF608Q9ULD9 1512 aaPredicted RBP31.53■■■□□ 2.64
TF-208ENST00000474287 POLA1P09884 1462 aaPredicted RBP31.46■■■□□ 2.63
TF-208ENST00000474287 TARBP1Q13395 1621 aaKnown RBP31.46■■■□□ 2.63
TF-208ENST00000474287 EIF4G3O43432 1585 aaKnown RBP31.44■■■□□ 2.62
TF-208ENST00000474287 CUX1P39880 1505 aa31.41■■■□□ 2.62
TF-208ENST00000474287 FGD5Q6ZNL6 1462 aa31.36■■■□□ 2.61
TF-208ENST00000474287 RAD54L2Q9Y4B4 1467 aa31.33■■■□□ 2.61
TF-208ENST00000474287 SOGA1O94964 1423 aa31.31■■■□□ 2.6
TF-208ENST00000474287 AQRO60306 1485 aaKnown RBP eCLIP31.28■■■□□ 2.61e-10■■■■■ 39.7
TF-208ENST00000474287 OSCARQ8IYS5 282 aa31.27■■■□□ 2.6
TF-208ENST00000474287 WDR97A6NE52 1622 aa31.2■■■□□ 2.58
TF-208ENST00000474287 TDRD9Q8NDG6 1382 aaKnown RBP31.17■■■□□ 2.58
TF-208ENST00000474287 CHD1O14646 1710 aa31.13■■■□□ 2.57
TF-208ENST00000474287 BIVM-ERCC5R4GMW8 1640 aa31.09■■■□□ 2.57
TF-208ENST00000474287 WRNQ14191 1432 aaPredicted RBP eCLIP31.07■■■□□ 2.57
TF-208ENST00000474287 TOP2BQ02880 1626 aa31.07■■■□□ 2.56
TF-208ENST00000474287 SYNJ1O43426 1573 aa31.05■■■□□ 2.56
TF-208ENST00000474287 SNAPC4Q5SXM2 1469 aa31.02■■■□□ 2.56
TF-208ENST00000474287 ABCA10Q8WWZ4 1543 aa31.02■■■□□ 2.56
TF-208ENST00000474287 PBRM1Q86U86 1689 aa31■■■□□ 2.55
TF-208ENST00000474287 GRIN2BQ13224 1484 aa31■■■□□ 2.55
TF-208ENST00000474287 FBLN2P98095 1184 aa30.97■■■□□ 2.55
TF-208ENST00000474287 ABCA5Q8WWZ7 1642 aa30.97■■■□□ 2.55
TF-208ENST00000474287 GAPVD1Q14C86 1478 aa30.96■■■□□ 2.55
TF-208ENST00000474287 MAGI1Q96QZ7 1491 aaPredicted RBP30.96■■■□□ 2.55
TF-208ENST00000474287 TRIM41Q8WV44 630 aa30.9■■■□□ 2.54
TF-208ENST00000474287 RIMBP3CA6NJZ7 1639 aa30.9■■■□□ 2.54
TF-208ENST00000474287 RIMBP3BA6NNM3 1639 aa30.9■■■□□ 2.54
TF-208ENST00000474287 RIMBP3Q9UFD9 1639 aa30.9■■■□□ 2.54
TF-208ENST00000474287 SYNJ2O15056 1496 aa30.84■■■□□ 2.53
TF-208ENST00000474287 ARHGEF11O15085 1522 aa30.83■■■□□ 2.53
TF-208ENST00000474287 CHMP7Q8WUX9 453 aaPredicted RBP30.82■■■□□ 2.52
TF-208ENST00000474287 CLASP1Q7Z460 1538 aa30.74■■■□□ 2.51
TF-208ENST00000474287 ADAMTS12P58397 1594 aa30.71■■■□□ 2.51
TF-208ENST00000474287 ERICH3Q5RHP9 1530 aa30.66■■■□□ 2.5
TF-208ENST00000474287 GRIN2AQ12879 1464 aa30.62■■■□□ 2.49
TF-208ENST00000474287 FHAD1B1AJZ9 1412 aa30.58■■■□□ 2.49
TF-208ENST00000474287 ARAP1Q96P48 1450 aa30.56■■■□□ 2.48
TF-208ENST00000474287 CEP170Q5SW79 1584 aa30.5■■■□□ 2.47
TF-208ENST00000474287 CYB5RLQ6IPT4 315 aa30.5■■■□□ 2.47
TF-208ENST00000474287 NUP160Q12769 1436 aa30.47■■■□□ 2.47
TF-208ENST00000474287 KIF27Q86VH2 1401 aa30.44■■■□□ 2.46
TF-208ENST00000474287 CUL7Q14999 1698 aa30.36■■■□□ 2.45
TF-208ENST00000474287 SHROOM2Q13796 1616 aa30.33■■■□□ 2.45
TF-208ENST00000474287 IGF1RP08069 1367 aa30.32■■■□□ 2.44
TF-208ENST00000474287 ERCC6L2Q5T890 1561 aa30.29■■■□□ 2.44
TF-208ENST00000474287 RUSC2Q8N2Y8 1516 aa30.27■■■□□ 2.44
TF-208ENST00000474287 CARMIL1Q5VZK9 1371 aa30.15■■■□□ 2.42
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms