RNA–Protein interactions for RNA: ENST00000320370.11

SSFA2-201, Transcript of Sperm-specific antigen 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SSFA2, Length 4,965 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSFA2-201ENST00000320370 NISCHQ9Y2I1 1504 aa29.03■■■□□ 2.24
SSFA2-201ENST00000320370 DCAF8L2P0C7V8 631 aa28.81■■■□□ 2.2
SSFA2-201ENST00000320370 SUPT5HO00267 1087 aaKnown RBP27.67■■■□□ 2.02
SSFA2-201ENST00000320370 SHROOM4Q9ULL8 1493 aa27.3■■□□□ 1.96
SSFA2-201ENST00000320370 EHMT2Q96KQ7 1210 aa26.55■■□□□ 1.84
SSFA2-201ENST00000320370 PCGF6Q9BYE7 350 aa26.11■■□□□ 1.77
SSFA2-201ENST00000320370 FAM9AQ8IZU1 332 aaPredicted RBP25.96■■□□□ 1.75
SSFA2-201ENST00000320370 APLP2Q06481 763 aa25.86■■□□□ 1.73
SSFA2-201ENST00000320370 PELP1Q8IZL8 1130 aaKnown RBP25.77■■□□□ 1.72
SSFA2-201ENST00000320370 ZEB1P37275 1124 aaPredicted RBP25.75■■□□□ 1.71
SSFA2-201ENST00000320370 TRIM41Q8WV44 630 aa25.72■■□□□ 1.71
SSFA2-201ENST00000320370 TTBK1Q5TCY1 1321 aaPredicted RBP25.65■■□□□ 1.7
SSFA2-201ENST00000320370 CCER1Q8TC90 406 aaPredicted RBP25.39■■□□□ 1.66
SSFA2-201ENST00000320370 CENPBP07199 599 aaPredicted RBP25.37■■□□□ 1.65
SSFA2-201ENST00000320370 RANGAP1P46060 587 aaPredicted RBP25.35■■□□□ 1.65
SSFA2-201ENST00000320370 HRCP23327 699 aa25.23■■□□□ 1.63
SSFA2-201ENST00000320370 TRIM26Q12899 539 aaPredicted RBP25.23■■□□□ 1.63
SSFA2-201ENST00000320370 CHIC1Q5VXU3 224 aa25.22■■□□□ 1.63
SSFA2-201ENST00000320370 UBTFP17480 764 aaKnown RBP25.17■■□□□ 1.62
SSFA2-201ENST00000320370 ATP1B4Q9UN42 357 aaPredicted RBP25.01■■□□□ 1.59
SSFA2-201ENST00000320370 LOC105371045A0A1W2PR82 267 aa24.95■■□□□ 1.58
SSFA2-201ENST00000320370 PPARGC1BQ86YN6 1023 aaKnown RBP24.87■■□□□ 1.57
SSFA2-201ENST00000320370 YTHDC1Q96MU7 727 aaKnown RBP24.68■■□□□ 1.54
SSFA2-201ENST00000320370 ABCC9O60706 1549 aa24.62■■□□□ 1.53
SSFA2-201ENST00000320370 ERICH6Q7L0X2 663 aa24.55■■□□□ 1.52
SSFA2-201ENST00000320370 MYT1Q01538 1121 aa24.54■■□□□ 1.52
SSFA2-201ENST00000320370 NEFLP07196 543 aa24.53■■□□□ 1.52
SSFA2-201ENST00000320370 HNRNPUL2Q1KMD3 747 aaKnown RBP24.35■■□□□ 1.49
SSFA2-201ENST00000320370 ITGAEP38570 1179 aa24.31■■□□□ 1.48
SSFA2-201ENST00000320370 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.29■■□□□ 1.48
SSFA2-201ENST00000320370 PABPN1Q86U42 306 aaKnown RBP eCLIP24.28■■□□□ 1.48
SSFA2-201ENST00000320370 DIEXFQ68CQ4 756 aaKnown RBP24.2■■□□□ 1.47
SSFA2-201ENST00000320370 ZCCHC6Q5VYS8 1495 aaKnown RBP24.11■■□□□ 1.45
SSFA2-201ENST00000320370 CCDC180Q9P1Z9 1646 aa23.99■■□□□ 1.43
SSFA2-201ENST00000320370 POLR3GLQ9BT43 218 aa23.94■■□□□ 1.42
SSFA2-201ENST00000320370 DCAF1Q9Y4B6 1507 aa23.89■■□□□ 1.41
SSFA2-201ENST00000320370 MYT1LQ9UL68 1186 aa23.88■■□□□ 1.41
SSFA2-201ENST00000320370 SCRIBQ14160 1630 aa23.78■■□□□ 1.4
SSFA2-201ENST00000320370 CNGB1Q14028 1251 aaPredicted RBP23.78■■□□□ 1.4
SSFA2-201ENST00000320370 ZNF316A6NFI3 1004 aaPredicted RBP23.74■■□□□ 1.39
SSFA2-201ENST00000320370 CSRNP3Q8WYN3 585 aa23.74■■□□□ 1.39
SSFA2-201ENST00000320370 FAM50AQ14320 339 aaKnown RBP23.74■■□□□ 1.39
SSFA2-201ENST00000320370 GTF3C3Q9Y5Q9 886 aa23.73■■□□□ 1.39
SSFA2-201ENST00000320370 ACIN1Q9UKV3 1341 aaKnown RBP23.59■■□□□ 1.37
SSFA2-201ENST00000320370 NEUROD1Q13562 356 aa23.57■■□□□ 1.36
SSFA2-201ENST00000320370 DAXXQ9UER7 740 aaPredicted RBP23.53■■□□□ 1.36
SSFA2-201ENST00000320370 TRIM52Q96A61 297 aa23.49■■□□□ 1.35
SSFA2-201ENST00000320370 ANP32CO43423 234 aa23.46■■□□□ 1.35
SSFA2-201ENST00000320370 MYO15BQ96JP2 1530 aa23.43■■□□□ 1.34
SSFA2-201ENST00000320370 SLC4A1APQ9BWU0 796 aaKnown RBP23.37■■□□□ 1.33
SSFA2-201ENST00000320370 RB1CC1Q8TDY2 1594 aa23.32■■□□□ 1.32
SSFA2-201ENST00000320370 BCANQ96GW7 911 aa23.32■■□□□ 1.32
SSFA2-201ENST00000320370 FBLN2P98095 1184 aa23.28■■□□□ 1.32
SSFA2-201ENST00000320370 P3H3Q8IVL6 736 aa23.24■■□□□ 1.31
SSFA2-201ENST00000320370 RSF1Q96T23 1441 aaPredicted RBP23.24■■□□□ 1.31
SSFA2-201ENST00000320370 RTL5Q5HYW3 569 aaPredicted RBP23.23■■□□□ 1.31
SSFA2-201ENST00000320370 ZNF326Q5BKZ1 582 aaKnown RBP23.22■■□□□ 1.31
SSFA2-201ENST00000320370 CLSPNQ9HAW4 1339 aa23.22■■□□□ 1.31
SSFA2-201ENST00000320370 NACADO15069 1562 aa23.22■■□□□ 1.31
SSFA2-201ENST00000320370 CDK11AQ9UQ88 783 aaPredicted RBP23.19■■□□□ 1.3
SSFA2-201ENST00000320370 ARID3CA6NKF2 412 aa23.13■■□□□ 1.29
SSFA2-201ENST00000320370 EEA1Q15075 1411 aa23.07■■□□□ 1.28
SSFA2-201ENST00000320370 CLIP1P30622 1438 aa23.02■■□□□ 1.28
SSFA2-201ENST00000320370 TONSLQ96HA7 1378 aa23■■□□□ 1.27
SSFA2-201ENST00000320370 CEP162Q5TB80 1403 aa22.97■■□□□ 1.27
SSFA2-201ENST00000320370 SCAF1Q9H7N4 1312 aaKnown RBP22.97■■□□□ 1.27
SSFA2-201ENST00000320370 GOLGA3Q08378 1498 aa22.95■■□□□ 1.26
SSFA2-201ENST00000320370 ZNF777Q9ULD5 760 aaPredicted RBP22.91■■□□□ 1.26
SSFA2-201ENST00000320370 DDX10Q13206 875 aaKnown RBP22.9■■□□□ 1.26
SSFA2-201ENST00000320370 FKBP8Q14318 412 aa22.9■■□□□ 1.26
SSFA2-201ENST00000320370 MIER1Q8N108 512 aa22.87■■□□□ 1.25
SSFA2-201ENST00000320370 TNIKQ9UKE5 1360 aa22.86■■□□□ 1.25
SSFA2-201ENST00000320370 BAZ1BQ9UIG0 1483 aaKnown RBP22.83■■□□□ 1.24
SSFA2-201ENST00000320370 BAZ1AQ9NRL2 1556 aaPredicted RBP22.82■■□□□ 1.24
SSFA2-201ENST00000320370 WRNQ14191 1432 aaPredicted RBP eCLIP22.81■■□□□ 1.24
SSFA2-201ENST00000320370 HNRNPUQ00839 825 aaKnown RBP eCLIP22.79■■□□□ 1.24
SSFA2-201ENST00000320370 ANP32AP39687 249 aaKnown RBP22.75■■□□□ 1.23
SSFA2-201ENST00000320370 CEP164Q9UPV0 1460 aa22.73■■□□□ 1.23
SSFA2-201ENST00000320370 CECR2Q9BXF3 1484 aa22.7■■□□□ 1.22
SSFA2-201ENST00000320370 MTUS2Q5JR59 1369 aa22.69■■□□□ 1.22
SSFA2-201ENST00000320370 CANXP27824 592 aaKnown RBP22.64■■□□□ 1.22
SSFA2-201ENST00000320370 FAM9BQ8IZU0 186 aa22.64■■□□□ 1.22
SSFA2-201ENST00000320370 CHIC2Q9UKJ5 165 aa22.64■■□□□ 1.21
SSFA2-201ENST00000320370 KIF27Q86VH2 1401 aa22.61■■□□□ 1.21
SSFA2-201ENST00000320370 ZBTB47Q9UFB7 747 aaPredicted RBP22.59■■□□□ 1.21
SSFA2-201ENST00000320370 CHMP7Q8WUX9 453 aaPredicted RBP22.58■■□□□ 1.21
SSFA2-201ENST00000320370 BCL11AQ9H165 835 aa22.56■■□□□ 1.2
SSFA2-201ENST00000320370 NEFMP07197 916 aa22.53■■□□□ 1.2
SSFA2-201ENST00000320370 MRS2Q9HD23 443 aa22.52■■□□□ 1.2
SSFA2-201ENST00000320370 NPM1P06748 294 aaKnown RBP eCLIP22.51■■□□□ 1.19
SSFA2-201ENST00000320370 SLC24A1O60721 1099 aa22.5■■□□□ 1.19
SSFA2-201ENST00000320370 TMC1Q8TDI8 760 aa22.5■■□□□ 1.19
SSFA2-201ENST00000320370 EIF4G2P78344 907 aaKnown RBP eCLIP22.5■■□□□ 1.19
SSFA2-201ENST00000320370 NPM2Q86SE8 214 aaKnown RBP22.5■■□□□ 1.19
SSFA2-201ENST00000320370 TSPY4P0CV99 314 aa22.49■■□□□ 1.19
SSFA2-201ENST00000320370 TSPY10P0CW01 314 aa22.49■■□□□ 1.19
SSFA2-201ENST00000320370 HIRIP3Q9BW71 556 aaPredicted RBP22.48■■□□□ 1.19
SSFA2-201ENST00000320370 CHGAP10645 457 aaKnown RBP22.47■■□□□ 1.19
SSFA2-201ENST00000320370 CCDC136Q96JN2 1154 aa22.45■■□□□ 1.18
SSFA2-201ENST00000320370 SOGA1O94964 1423 aa22.45■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms