RNA–Protein interactions for RNA: ENST00000463653.1

CAPN10-212, Transcript of calpain 10, humanhuman

TSL 2

Gene CAPN10, Length 787 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN10-212ENST00000463653 NISCHQ9Y2I1 1504 aa55.14■■■■■ 6.42
CAPN10-212ENST00000463653 ABCC9O60706 1549 aa49.9■■■■■ 5.58
CAPN10-212ENST00000463653 CCDC180Q9P1Z9 1646 aa49.4■■■■■ 5.5
CAPN10-212ENST00000463653 RB1CC1Q8TDY2 1594 aa47.28■■■■■ 5.16
CAPN10-212ENST00000463653 DNAJC5BQ9UF47 199 aa47.2■■■■■ 5.15
CAPN10-212ENST00000463653 NACADO15069 1562 aa46.82■■■■■ 5.09
CAPN10-212ENST00000463653 DCAF8L2P0C7V8 631 aa46.57■■■■■ 5.05
CAPN10-212ENST00000463653 PABPN1Q86U42 306 aaKnown RBP eCLIP46.38■■■■■ 5.02
CAPN10-212ENST00000463653 UNC13AQ9UPW8 1703 aa46.23■■■■■ 4.99
CAPN10-212ENST00000463653 ZCCHC6Q5VYS8 1495 aaKnown RBP46.02■■■■■ 4.96
CAPN10-212ENST00000463653 MYO15BQ96JP2 1530 aa45.96■■■■■ 4.95
CAPN10-212ENST00000463653 BICRAQ9NZM4 1560 aa45.87■■■■■ 4.93
CAPN10-212ENST00000463653 DCAF1Q9Y4B6 1507 aa45.72■■■■■ 4.91
CAPN10-212ENST00000463653 SHROOM4Q9ULL8 1493 aa45.2■■■■■ 4.83
CAPN10-212ENST00000463653 CC2D2AQ9P2K1 1620 aa45.04■■■■■ 4.8
CAPN10-212ENST00000463653 CECR2Q9BXF3 1484 aa44.99■■■■■ 4.79
CAPN10-212ENST00000463653 SCRIBQ14160 1630 aa44.99■■■■■ 4.79
CAPN10-212ENST00000463653 EIF4G1Q04637 1599 aaKnown RBP44.82■■■■■ 4.76
CAPN10-212ENST00000463653 DNAJC5Q9H3Z4 198 aa43.74■■■■■ 4.59
CAPN10-212ENST00000463653 CUX2O14529 1486 aa43.2■■■■■ 4.51
CAPN10-212ENST00000463653 NCAPD3P42695 1498 aa43.2■■■■■ 4.51
CAPN10-212ENST00000463653 ERCC6Q03468 1493 aa43.15■■■■■ 4.5
CAPN10-212ENST00000463653 ATAD2BQ9ULI0 1458 aa43■■■■■ 4.47
CAPN10-212ENST00000463653 SMARCA2P51531 1590 aa42.89■■■■■ 4.46
CAPN10-212ENST00000463653 SMARCA4P51532 1647 aa42.86■■■■■ 4.45
CAPN10-212ENST00000463653 HMGXB3Q12766 1538 aa42.85■■■■■ 4.45
CAPN10-212ENST00000463653 BAZ1AQ9NRL2 1556 aaPredicted RBP42.73■■■■■ 4.43
CAPN10-212ENST00000463653 NESP48681 1621 aa42.7■■■■■ 4.43
CAPN10-212ENST00000463653 BAZ1BQ9UIG0 1483 aaKnown RBP42.6■■■■■ 4.41
CAPN10-212ENST00000463653 MROH2BQ7Z745 1585 aa42.48■■■■■ 4.39
CAPN10-212ENST00000463653 PEG3Q9GZU2 1588 aa42.41■■■■■ 4.38
CAPN10-212ENST00000463653 THOC2Q8NI27 1593 aaKnown RBP42.36■■■■■ 4.37
CAPN10-212ENST00000463653 LAMC3Q9Y6N6 1575 aa42.35■■■■■ 4.37
CAPN10-212ENST00000463653 KIF21AQ7Z4S6 1674 aa42.18■■■■■ 4.34
CAPN10-212ENST00000463653 PDS5BQ9NTI5 1447 aa42.12■■■■■ 4.33
CAPN10-212ENST00000463653 RSF1Q96T23 1441 aaPredicted RBP42.11■■■■■ 4.33
CAPN10-212ENST00000463653 WIZO95785 1651 aa42.05■■■■■ 4.32
CAPN10-212ENST00000463653 CADPSQ9ULU8 1353 aa41.88■■■■■ 4.3
CAPN10-212ENST00000463653 MRC2Q9UBG0 1479 aa41.78■■■■■ 4.28
CAPN10-212ENST00000463653 TRIM41Q8WV44 630 aa41.69■■■■■ 4.26
CAPN10-212ENST00000463653 WDR62O43379 1518 aa41.68■■■■■ 4.26
CAPN10-212ENST00000463653 TOP2AP11388 1531 aaKnown RBP41.64■■■■■ 4.26
CAPN10-212ENST00000463653 CEP164Q9UPV0 1460 aa41.53■■■■■ 4.24
CAPN10-212ENST00000463653 FANCD2Q9BXW9 1451 aa41.42■■■■■ 4.22
CAPN10-212ENST00000463653 CFTRP13569 1480 aa41.28■■■■■ 4.2
CAPN10-212ENST00000463653 OSCARQ8IYS5 282 aa41.18■■■■■ 4.18
CAPN10-212ENST00000463653 SUPT5HO00267 1087 aaKnown RBP41.15■■■■■ 4.18
CAPN10-212ENST00000463653 CCDC88BA6NC98 1476 aa41.11■■■■■ 4.17
CAPN10-212ENST00000463653 URB2Q14146 1524 aaKnown RBP41.08■■■■■ 4.17
CAPN10-212ENST00000463653 PRDM2Q13029 1718 aa40.92■■■■■ 4.14
CAPN10-212ENST00000463653 IFT140Q96RY7 1462 aa40.7■■■■■ 4.11
CAPN10-212ENST00000463653 RIMBP3CA6NJZ7 1639 aa40.68■■■■■ 4.1
CAPN10-212ENST00000463653 RIMBP3BA6NNM3 1639 aa40.68■■■■■ 4.1
CAPN10-212ENST00000463653 RIMBP3Q9UFD9 1639 aa40.68■■■■■ 4.1
CAPN10-212ENST00000463653 ZNF608Q9ULD9 1512 aaPredicted RBP40.67■■■■■ 4.1
CAPN10-212ENST00000463653 TOPBP1Q92547 1522 aa40.57■■■■■ 4.09
CAPN10-212ENST00000463653 ARHGEF11O15085 1522 aa40.49■■■■■ 4.07
CAPN10-212ENST00000463653 ABCC8Q09428 1581 aa40.48■■■■■ 4.07
CAPN10-212ENST00000463653 EIF4G3O43432 1585 aaKnown RBP40.44■■■■■ 4.06
CAPN10-212ENST00000463653 DNMBPQ6XZF7 1577 aa40.39■■■■■ 4.06
CAPN10-212ENST00000463653 CHD1O14646 1710 aa40.28■■■■■ 4.04
CAPN10-212ENST00000463653 CYB5RLQ6IPT4 315 aa40.27■■■■■ 4.04
CAPN10-212ENST00000463653 AQRO60306 1485 aaKnown RBP eCLIP40.26■■■■■ 4.03
CAPN10-212ENST00000463653 TARBP1Q13395 1621 aaKnown RBP40.24■■■■■ 4.03
CAPN10-212ENST00000463653 FBLN2P98095 1184 aa40.16■■■■■ 4.02
CAPN10-212ENST00000463653 POLA1P09884 1462 aaPredicted RBP40.12■■■■■ 4.01
CAPN10-212ENST00000463653 ARAP1Q96P48 1450 aa40.04■■■■■ 4
CAPN10-212ENST00000463653 TRHP20396 242 aaPredicted RBP40.03■■■■■ 4
CAPN10-212ENST00000463653 RAD54L2Q9Y4B4 1467 aa40■■■■□ 3.99
CAPN10-212ENST00000463653 SOGA1O94964 1423 aa39.96■■■■□ 3.99
CAPN10-212ENST00000463653 TDRD9Q8NDG6 1382 aaKnown RBP39.94■■■■□ 3.98
CAPN10-212ENST00000463653 CUX1P39880 1505 aa39.84■■■■□ 3.97
CAPN10-212ENST00000463653 SNAPC4Q5SXM2 1469 aa39.83■■■■□ 3.97
CAPN10-212ENST00000463653 WDR97A6NE52 1622 aa39.82■■■■□ 3.96
CAPN10-212ENST00000463653 FGD5Q6ZNL6 1462 aa39.81■■■■□ 3.96
CAPN10-212ENST00000463653 CHMP7Q8WUX9 453 aaPredicted RBP39.76■■■■□ 3.96
CAPN10-212ENST00000463653 CLASP1Q7Z460 1538 aa39.74■■■■□ 3.95
CAPN10-212ENST00000463653 SYNJ1O43426 1573 aa39.72■■■■□ 3.95
CAPN10-212ENST00000463653 MAGI1Q96QZ7 1491 aaPredicted RBP39.7■■■■□ 3.95
CAPN10-212ENST00000463653 WRNQ14191 1432 aaPredicted RBP eCLIP39.68■■■■□ 3.94
CAPN10-212ENST00000463653 GRIN2BQ13224 1484 aa39.66■■■■□ 3.94
CAPN10-212ENST00000463653 BIVM-ERCC5R4GMW8 1640 aa39.64■■■■□ 3.94
CAPN10-212ENST00000463653 TOP2BQ02880 1626 aa39.62■■■■□ 3.93
CAPN10-212ENST00000463653 SYNJ2O15056 1496 aa39.58■■■■□ 3.93
CAPN10-212ENST00000463653 PBRM1Q86U86 1689 aa39.51■■■■□ 3.91
CAPN10-212ENST00000463653 GAPVD1Q14C86 1478 aa39.46■■■■□ 3.91
CAPN10-212ENST00000463653 ABCA10Q8WWZ4 1543 aa39.32■■■■□ 3.89
CAPN10-212ENST00000463653 ABCA5Q8WWZ7 1642 aa39.3■■■■□ 3.88
CAPN10-212ENST00000463653 AEBP2Q6ZN18 517 aaPredicted RBP39.25■■■■□ 3.87
CAPN10-212ENST00000463653 GRIN2AQ12879 1464 aa39.14■■■■□ 3.86
CAPN10-212ENST00000463653 ERCC6L2Q5T890 1561 aa39.08■■■■□ 3.85
CAPN10-212ENST00000463653 ADAMTS12P58397 1594 aa39.05■■■■□ 3.84
CAPN10-212ENST00000463653 CEP170Q5SW79 1584 aa39.02■■■■□ 3.84
CAPN10-212ENST00000463653 NUP160Q12769 1436 aa39.01■■■■□ 3.84
CAPN10-212ENST00000463653 FHAD1B1AJZ9 1412 aa38.93■■■■□ 3.82
CAPN10-212ENST00000463653 SHROOM2Q13796 1616 aa38.9■■■■□ 3.82
CAPN10-212ENST00000463653 ERICH3Q5RHP9 1530 aa38.85■■■■□ 3.81
CAPN10-212ENST00000463653 KIF27Q86VH2 1401 aa38.82■■■■□ 3.81
CAPN10-212ENST00000463653 KIF13AQ9H1H9 1805 aa38.71■■■■□ 3.79
CAPN10-212ENST00000463653 PRG4Q92954 1404 aaPredicted RBP38.71■■■■□ 3.79
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms