RNA–Protein interactions for RNA: ENST00000457812.5

RAPH1-211, Transcript of Ras association (RalGDS/AF-6) and pleckstrin homology domains 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene RAPH1, Length 2,673 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPH1-211ENST00000457812 NISCHQ9Y2I1 1504 aa36.01■■■■□ 3.35
RAPH1-211ENST00000457812 SHROOM4Q9ULL8 1493 aa31.94■■■□□ 2.7
RAPH1-211ENST00000457812 SUPT5HO00267 1087 aaKnown RBP31.64■■■□□ 2.66
RAPH1-211ENST00000457812 HRCP23327 699 aa31.28■■■□□ 2.6
RAPH1-211ENST00000457812 MYO15BQ96JP2 1530 aa31.11■■■□□ 2.57
RAPH1-211ENST00000457812 PCGF6Q9BYE7 350 aa30.97■■■□□ 2.55
RAPH1-211ENST00000457812 PPARGC1BQ86YN6 1023 aaKnown RBP30.91■■■□□ 2.54
RAPH1-211ENST00000457812 CHIC1Q5VXU3 224 aa30.9■■■□□ 2.54
RAPH1-211ENST00000457812 ZCCHC6Q5VYS8 1495 aaKnown RBP30.58■■■□□ 2.49
RAPH1-211ENST00000457812 DCAF8L2P0C7V8 631 aa30.32■■■□□ 2.44
RAPH1-211ENST00000457812 LOC105371045A0A1W2PR82 267 aa30.3■■■□□ 2.44
RAPH1-211ENST00000457812 DCAF1Q9Y4B6 1507 aa30.09■■■□□ 2.41
RAPH1-211ENST00000457812 CCDC180Q9P1Z9 1646 aa30.05■■■□□ 2.4
RAPH1-211ENST00000457812 TRIM26Q12899 539 aaPredicted RBP29.88■■■□□ 2.37
RAPH1-211ENST00000457812 SCAF1Q9H7N4 1312 aaKnown RBP29.5■■■□□ 2.31
RAPH1-211ENST00000457812 PELP1Q8IZL8 1130 aaKnown RBP29.38■■■□□ 2.29
RAPH1-211ENST00000457812 ZEB1P37275 1124 aaPredicted RBP29.37■■■□□ 2.29
RAPH1-211ENST00000457812 EHMT2Q96KQ7 1210 aa29.33■■■□□ 2.29
RAPH1-211ENST00000457812 FAM9AQ8IZU1 332 aaPredicted RBP29.32■■■□□ 2.28
RAPH1-211ENST00000457812 TRIM41Q8WV44 630 aa29.18■■■□□ 2.26
RAPH1-211ENST00000457812 ABCC9O60706 1549 aa29■■■□□ 2.23
RAPH1-211ENST00000457812 RSF1Q96T23 1441 aaPredicted RBP28.94■■■□□ 2.22
RAPH1-211ENST00000457812 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.85■■■□□ 2.21
RAPH1-211ENST00000457812 RB1CC1Q8TDY2 1594 aa28.85■■■□□ 2.21
RAPH1-211ENST00000457812 NEUROD1Q13562 356 aa28.84■■■□□ 2.21
RAPH1-211ENST00000457812 ACIN1Q9UKV3 1341 aaKnown RBP28.78■■■□□ 2.2
RAPH1-211ENST00000457812 SCRIBQ14160 1630 aa28.72■■■□□ 2.19
RAPH1-211ENST00000457812 CCER1Q8TC90 406 aaPredicted RBP28.68■■■□□ 2.18
RAPH1-211ENST00000457812 GTF3C3Q9Y5Q9 886 aa28.63■■■□□ 2.17
RAPH1-211ENST00000457812 TTBK1Q5TCY1 1321 aaPredicted RBP28.54■■■□□ 2.16
RAPH1-211ENST00000457812 DIEXFQ68CQ4 756 aaKnown RBP28.53■■■□□ 2.16
RAPH1-211ENST00000457812 CENPBP07199 599 aaPredicted RBP28.38■■■□□ 2.13
RAPH1-211ENST00000457812 CECR2Q9BXF3 1484 aa28.33■■■□□ 2.12
RAPH1-211ENST00000457812 MROH2BQ7Z745 1585 aa28.21■■■□□ 2.11
RAPH1-211ENST00000457812 YTHDC1Q96MU7 727 aaKnown RBP28.2■■■□□ 2.1
RAPH1-211ENST00000457812 WIZO95785 1651 aa28.13■■■□□ 2.09
RAPH1-211ENST00000457812 NACADO15069 1562 aa28.04■■■□□ 2.08
RAPH1-211ENST00000457812 ZNF316A6NFI3 1004 aaPredicted RBP28.01■■■□□ 2.07
RAPH1-211ENST00000457812 MYT1Q01538 1121 aa28■■■□□ 2.07
RAPH1-211ENST00000457812 CEP162Q5TB80 1403 aa27.93■■■□□ 2.06
RAPH1-211ENST00000457812 ABCC8Q09428 1581 aa27.91■■■□□ 2.06
RAPH1-211ENST00000457812 MIER1Q8N108 512 aa27.9■■■□□ 2.06
RAPH1-211ENST00000457812 CCDC88BA6NC98 1476 aa27.9■■■□□ 2.06
RAPH1-211ENST00000457812 WRNQ14191 1432 aaPredicted RBP eCLIP27.89■■■□□ 2.05
RAPH1-211ENST00000457812 EIF4G1Q04637 1599 aaKnown RBP27.87■■■□□ 2.05
RAPH1-211ENST00000457812 SOGA1O94964 1423 aa27.81■■■□□ 2.04
RAPH1-211ENST00000457812 BAZ1AQ9NRL2 1556 aaPredicted RBP27.77■■■□□ 2.04
RAPH1-211ENST00000457812 UBTFP17480 764 aaKnown RBP27.76■■■□□ 2.03
RAPH1-211ENST00000457812 HNRNPUL2Q1KMD3 747 aaKnown RBP27.74■■■□□ 2.03
RAPH1-211ENST00000457812 RUSC2Q8N2Y8 1516 aa27.68■■■□□ 2.02
RAPH1-211ENST00000457812 TNIKQ9UKE5 1360 aa27.68■■■□□ 2.02
RAPH1-211ENST00000457812 CSRNP3Q8WYN3 585 aa27.6■■■□□ 2.01
RAPH1-211ENST00000457812 TOP2AP11388 1531 aaKnown RBP27.44■■□□□ 1.98
RAPH1-211ENST00000457812 SMARCA2P51531 1590 aa27.43■■□□□ 1.98
RAPH1-211ENST00000457812 GOLGA3Q08378 1498 aa27.39■■□□□ 1.98
RAPH1-211ENST00000457812 RANGAP1P46060 587 aaPredicted RBP27.37■■□□□ 1.97
RAPH1-211ENST00000457812 EEA1Q15075 1411 aa27.32■■□□□ 1.96
RAPH1-211ENST00000457812 SUPT16HQ9Y5B9 1047 aaKnown RBP27.29■■□□□ 1.96
RAPH1-211ENST00000457812 SMARCA4P51532 1647 aa27.26■■□□□ 1.95
RAPH1-211ENST00000457812 UNC13AQ9UPW8 1703 aa27.24■■□□□ 1.95
RAPH1-211ENST00000457812 CLIP1P30622 1438 aa27.23■■□□□ 1.95
RAPH1-211ENST00000457812 APLP2Q06481 763 aa27.17■■□□□ 1.94
RAPH1-211ENST00000457812 VPS8Q8N3P4 1428 aa27.13■■□□□ 1.93
RAPH1-211ENST00000457812 CEP164Q9UPV0 1460 aa27.12■■□□□ 1.93
RAPH1-211ENST00000457812 TSHZ2Q9NRE2 1034 aa27.08■■□□□ 1.93
RAPH1-211ENST00000457812 DHX57Q6P158 1386 aaKnown RBP27.04■■□□□ 1.92
RAPH1-211ENST00000457812 SYNJ1O43426 1573 aa27.02■■□□□ 1.92
RAPH1-211ENST00000457812 RAPGEF2Q9Y4G8 1499 aa27.02■■□□□ 1.92
RAPH1-211ENST00000457812 KIF21BO75037 1637 aa27■■□□□ 1.91
RAPH1-211ENST00000457812 KCNH8Q96L42 1107 aa26.99■■□□□ 1.91
RAPH1-211ENST00000457812 BICRAQ9NZM4 1560 aa26.99■■□□□ 1.91
RAPH1-211ENST00000457812 CLSPNQ9HAW4 1339 aa26.92■■□□□ 1.9
RAPH1-211ENST00000457812 BCANQ96GW7 911 aa26.92■■□□□ 1.9
RAPH1-211ENST00000457812 KANK4Q5T7N3 995 aaPredicted RBP26.89■■□□□ 1.89
RAPH1-211ENST00000457812 ANP32EQ9BTT0 268 aa26.88■■□□□ 1.89
RAPH1-211ENST00000457812 PABPN1Q86U42 306 aaKnown RBP eCLIP26.85■■□□□ 1.89
RAPH1-211ENST00000457812 BAZ1BQ9UIG0 1483 aaKnown RBP26.81■■□□□ 1.88
RAPH1-211ENST00000457812 ITGAEP38570 1179 aa26.79■■□□□ 1.88
RAPH1-211ENST00000457812 FKBP8Q14318 412 aa26.69■■□□□ 1.86
RAPH1-211ENST00000457812 ARAP1Q96P48 1450 aa26.67■■□□□ 1.86
RAPH1-211ENST00000457812 BCL11AQ9H165 835 aa26.64■■□□□ 1.86
RAPH1-211ENST00000457812 DDX10Q13206 875 aaKnown RBP26.59■■□□□ 1.85
RAPH1-211ENST00000457812 RRBP1Q9P2E9 1410 aaKnown RBP26.56■■□□□ 1.84
RAPH1-211ENST00000457812 CCNB3Q8WWL7 1395 aa26.52■■□□□ 1.84
RAPH1-211ENST00000457812 HIRIP3Q9BW71 556 aaPredicted RBP26.51■■□□□ 1.83
RAPH1-211ENST00000457812 PEG3Q9GZU2 1588 aa26.48■■□□□ 1.83
RAPH1-211ENST00000457812 RAB3GAP2Q9H2M9 1393 aa26.48■■□□□ 1.83
RAPH1-211ENST00000457812 TRIM52Q96A61 297 aa26.48■■□□□ 1.83
RAPH1-211ENST00000457812 RBM19Q9Y4C8 960 aaKnown RBP26.47■■□□□ 1.83
RAPH1-211ENST00000457812 SIN3AQ96ST3 1273 aa26.46■■□□□ 1.83
RAPH1-211ENST00000457812 PRXQ9BXM0 1461 aa26.46■■□□□ 1.83
RAPH1-211ENST00000457812 MAPKBP1O60336 1514 aa26.45■■□□□ 1.83
RAPH1-211ENST00000457812 CUX2O14529 1486 aa26.45■■□□□ 1.82
RAPH1-211ENST00000457812 TOP2BQ02880 1626 aa26.44■■□□□ 1.82
RAPH1-211ENST00000457812 ATAD2BQ9ULI0 1458 aa26.42■■□□□ 1.82
RAPH1-211ENST00000457812 ERICH3Q5RHP9 1530 aa26.39■■□□□ 1.82
RAPH1-211ENST00000457812 WDR97A6NE52 1622 aa26.39■■□□□ 1.81
RAPH1-211ENST00000457812 NEFLP07196 543 aa26.35■■□□□ 1.81
RAPH1-211ENST00000457812 PPP1R15AO75807 674 aaPredicted RBP26.32■■□□□ 1.8
RAPH1-211ENST00000457812 ARHGAP35Q9NRY4 1499 aa26.31■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 7.1 ms