RNA–Protein interactions for RNA: ENST00000409001.5

SSFA2-202, Transcript of Sperm-specific antigen 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SSFA2, Length 4,987 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSFA2-202ENST00000409001 DCAF8L2P0C7V8 631 aa27.27■■□□□ 1.96
SSFA2-202ENST00000409001 NISCHQ9Y2I1 1504 aa26.9■■□□□ 1.9
SSFA2-202ENST00000409001 SUPT5HO00267 1087 aaKnown RBP26.46■■□□□ 1.83
SSFA2-202ENST00000409001 SHROOM4Q9ULL8 1493 aa26.05■■□□□ 1.76
SSFA2-202ENST00000409001 EHMT2Q96KQ7 1210 aa25.42■■□□□ 1.66
SSFA2-202ENST00000409001 PCGF6Q9BYE7 350 aa25.01■■□□□ 1.59
SSFA2-202ENST00000409001 FAM9AQ8IZU1 332 aaPredicted RBP24.9■■□□□ 1.58
SSFA2-202ENST00000409001 TTBK1Q5TCY1 1321 aaPredicted RBP24.59■■□□□ 1.53
SSFA2-202ENST00000409001 APLP2Q06481 763 aa24.54■■□□□ 1.52
SSFA2-202ENST00000409001 TRIM41Q8WV44 630 aa24.41■■□□□ 1.5
SSFA2-202ENST00000409001 PELP1Q8IZL8 1130 aaKnown RBP24.39■■□□□ 1.49
SSFA2-202ENST00000409001 ZEB1P37275 1124 aaPredicted RBP24.26■■□□□ 1.47
SSFA2-202ENST00000409001 CCER1Q8TC90 406 aaPredicted RBP24.22■■□□□ 1.47
SSFA2-202ENST00000409001 RANGAP1P46060 587 aaPredicted RBP24.15■■□□□ 1.46
SSFA2-202ENST00000409001 CENPBP07199 599 aaPredicted RBP24.09■■□□□ 1.45
SSFA2-202ENST00000409001 PPARGC1BQ86YN6 1023 aaKnown RBP23.98■■□□□ 1.43
SSFA2-202ENST00000409001 UBTFP17480 764 aaKnown RBP23.96■■□□□ 1.43
SSFA2-202ENST00000409001 HRCP23327 699 aa23.96■■□□□ 1.43
SSFA2-202ENST00000409001 CHIC1Q5VXU3 224 aa23.91■■□□□ 1.42
SSFA2-202ENST00000409001 TRIM26Q12899 539 aaPredicted RBP23.89■■□□□ 1.42
SSFA2-202ENST00000409001 LOC105371045A0A1W2PR82 267 aa23.89■■□□□ 1.41
SSFA2-202ENST00000409001 YTHDC1Q96MU7 727 aaKnown RBP23.74■■□□□ 1.39
SSFA2-202ENST00000409001 ATP1B4Q9UN42 357 aaPredicted RBP23.71■■□□□ 1.39
SSFA2-202ENST00000409001 ERICH6Q7L0X2 663 aa23.42■■□□□ 1.34
SSFA2-202ENST00000409001 NEFLP07196 543 aa23.33■■□□□ 1.33
SSFA2-202ENST00000409001 HNRNPUL2Q1KMD3 747 aaKnown RBP23.29■■□□□ 1.32
SSFA2-202ENST00000409001 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.26■■□□□ 1.31
SSFA2-202ENST00000409001 ITGAEP38570 1179 aa23.25■■□□□ 1.31
SSFA2-202ENST00000409001 MYT1Q01538 1121 aa23.09■■□□□ 1.29
SSFA2-202ENST00000409001 DIEXFQ68CQ4 756 aaKnown RBP23.06■■□□□ 1.28
SSFA2-202ENST00000409001 POLR3GLQ9BT43 218 aa22.8■■□□□ 1.24
SSFA2-202ENST00000409001 CNGB1Q14028 1251 aaPredicted RBP22.74■■□□□ 1.23
SSFA2-202ENST00000409001 GTF3C3Q9Y5Q9 886 aa22.71■■□□□ 1.23
SSFA2-202ENST00000409001 ABCC9O60706 1549 aa22.7■■□□□ 1.22
SSFA2-202ENST00000409001 PABPN1Q86U42 306 aaKnown RBP eCLIP22.68■■□□□ 1.22
SSFA2-202ENST00000409001 FAM50AQ14320 339 aaKnown RBP22.6■■□□□ 1.21
SSFA2-202ENST00000409001 NEUROD1Q13562 356 aa22.53■■□□□ 1.2
SSFA2-202ENST00000409001 ZNF316A6NFI3 1004 aaPredicted RBP22.52■■□□□ 1.2
SSFA2-202ENST00000409001 ACIN1Q9UKV3 1341 aaKnown RBP22.44■■□□□ 1.18
SSFA2-202ENST00000409001 BCANQ96GW7 911 aa22.44■■□□□ 1.18
SSFA2-202ENST00000409001 CSRNP3Q8WYN3 585 aa22.43■■□□□ 1.18
SSFA2-202ENST00000409001 MYT1LQ9UL68 1186 aa22.41■■□□□ 1.18
SSFA2-202ENST00000409001 DAXXQ9UER7 740 aaPredicted RBP22.41■■□□□ 1.18
SSFA2-202ENST00000409001 TRIM52Q96A61 297 aa22.36■■□□□ 1.17
SSFA2-202ENST00000409001 ZCCHC6Q5VYS8 1495 aaKnown RBP22.34■■□□□ 1.17
SSFA2-202ENST00000409001 DCAF1Q9Y4B6 1507 aa22.34■■□□□ 1.17
SSFA2-202ENST00000409001 ANP32CO43423 234 aa22.26■■□□□ 1.15
SSFA2-202ENST00000409001 P3H3Q8IVL6 736 aa22.18■■□□□ 1.14
SSFA2-202ENST00000409001 MYO15BQ96JP2 1530 aa22.15■■□□□ 1.14
SSFA2-202ENST00000409001 ZNF326Q5BKZ1 582 aaKnown RBP22.14■■□□□ 1.13
SSFA2-202ENST00000409001 RTL5Q5HYW3 569 aaPredicted RBP22.12■■□□□ 1.13
SSFA2-202ENST00000409001 SLC4A1APQ9BWU0 796 aaKnown RBP22.1■■□□□ 1.13
SSFA2-202ENST00000409001 SCRIBQ14160 1630 aa22.08■■□□□ 1.13
SSFA2-202ENST00000409001 CLSPNQ9HAW4 1339 aa22.05■■□□□ 1.12
SSFA2-202ENST00000409001 CDK11AQ9UQ88 783 aaPredicted RBP22.04■■□□□ 1.12
SSFA2-202ENST00000409001 ARID3CA6NKF2 412 aa21.98■■□□□ 1.11
SSFA2-202ENST00000409001 SCAF1Q9H7N4 1312 aaKnown RBP21.97■■□□□ 1.11
SSFA2-202ENST00000409001 DDX10Q13206 875 aaKnown RBP21.88■■□□□ 1.09
SSFA2-202ENST00000409001 FBLN2P98095 1184 aa21.88■■□□□ 1.09
SSFA2-202ENST00000409001 FKBP8Q14318 412 aa21.87■■□□□ 1.09
SSFA2-202ENST00000409001 MIER1Q8N108 512 aa21.84■■□□□ 1.09
SSFA2-202ENST00000409001 TONSLQ96HA7 1378 aa21.77■■□□□ 1.08
SSFA2-202ENST00000409001 RSF1Q96T23 1441 aaPredicted RBP21.76■■□□□ 1.07
SSFA2-202ENST00000409001 HNRNPUQ00839 825 aaKnown RBP eCLIP21.74■■□□□ 1.07
SSFA2-202ENST00000409001 ZNF777Q9ULD5 760 aaPredicted RBP21.74■■□□□ 1.07
SSFA2-202ENST00000409001 CCDC180Q9P1Z9 1646 aa21.7■■□□□ 1.07
SSFA2-202ENST00000409001 CLIP1P30622 1438 aa21.66■■□□□ 1.06
SSFA2-202ENST00000409001 FAM9BQ8IZU0 186 aa21.65■■□□□ 1.06
SSFA2-202ENST00000409001 HIRIP3Q9BW71 556 aaPredicted RBP21.63■■□□□ 1.05
SSFA2-202ENST00000409001 ANP32AP39687 249 aaKnown RBP21.61■■□□□ 1.05
SSFA2-202ENST00000409001 CHIC2Q9UKJ5 165 aa21.61■■□□□ 1.05
SSFA2-202ENST00000409001 CEP162Q5TB80 1403 aa21.61■■□□□ 1.05
SSFA2-202ENST00000409001 NPM2Q86SE8 214 aaKnown RBP21.58■■□□□ 1.05
SSFA2-202ENST00000409001 CANXP27824 592 aaKnown RBP21.56■■□□□ 1.04
SSFA2-202ENST00000409001 SALL2Q9Y467 1007 aaPredicted RBP21.5■■□□□ 1.03
SSFA2-202ENST00000409001 BCL11AQ9H165 835 aa21.49■■□□□ 1.03
SSFA2-202ENST00000409001 GOLGA3Q08378 1498 aa21.46■■□□□ 1.03
SSFA2-202ENST00000409001 IRX6P78412 446 aaPredicted RBP21.46■■□□□ 1.03
SSFA2-202ENST00000409001 EEA1Q15075 1411 aa21.45■■□□□ 1.02
SSFA2-202ENST00000409001 MRS2Q9HD23 443 aa21.44■■□□□ 1.02
SSFA2-202ENST00000409001 MTUS2Q5JR59 1369 aa21.42■■□□□ 1.02
SSFA2-202ENST00000409001 TNIKQ9UKE5 1360 aa21.41■■□□□ 1.02
SSFA2-202ENST00000409001 ZBTB47Q9UFB7 747 aaPredicted RBP21.41■■□□□ 1.02
SSFA2-202ENST00000409001 TMC1Q8TDI8 760 aa21.4■■□□□ 1.02
SSFA2-202ENST00000409001 CCDC136Q96JN2 1154 aa21.39■■□□□ 1.01
SSFA2-202ENST00000409001 WRNQ14191 1432 aaPredicted RBP eCLIP21.38■■□□□ 1.01
SSFA2-202ENST00000409001 RRP7BPQ9NSQ0 103 aa21.34■■□□□ 1.01
SSFA2-202ENST00000409001 KDM2AQ9Y2K7 1162 aa21.31■■□□□ 1
SSFA2-202ENST00000409001 EIF4G2P78344 907 aaKnown RBP eCLIP21.31■■□□□ 1
SSFA2-202ENST00000409001 NEFMP07197 916 aa21.3■■□□□ 1
SSFA2-202ENST00000409001 NBR1Q14596 966 aa21.28■■□□□ 1
SSFA2-202ENST00000409001 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.27■■□□□ 11e-6■■■□□ 16.4
SSFA2-202ENST00000409001 CECR2Q9BXF3 1484 aa21.26■□□□□ 0.99
SSFA2-202ENST00000409001 CHGAP10645 457 aaKnown RBP21.25■□□□□ 0.99
SSFA2-202ENST00000409001 RB1CC1Q8TDY2 1594 aa21.24■□□□□ 0.99
SSFA2-202ENST00000409001 SLC24A1O60721 1099 aa21.24■□□□□ 0.99
SSFA2-202ENST00000409001 CEP164Q9UPV0 1460 aa21.23■□□□□ 0.99
SSFA2-202ENST00000409001 SIN3AQ96ST3 1273 aa21.23■□□□□ 0.99
SSFA2-202ENST00000409001 TSPY4P0CV99 314 aa21.22■□□□□ 0.99
SSFA2-202ENST00000409001 TSPY10P0CW01 314 aa21.22■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms