RNA–Protein interactions for RNA: ENST00000391983.7

CAPN10-206, Transcript of calpain 10, humanhuman

TSL 1 (best)

Gene CAPN10, Length 2,320 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN10-206ENST00000391983 NISCHQ9Y2I1 1504 aa47.68■■■■■ 5.22
CAPN10-206ENST00000391983 CCDC180Q9P1Z9 1646 aa41.15■■■■■ 4.18
CAPN10-206ENST00000391983 ZCCHC6Q5VYS8 1495 aaKnown RBP40.17■■■■■ 4.02
CAPN10-206ENST00000391983 SHROOM4Q9ULL8 1493 aa39.58■■■■□ 3.93
CAPN10-206ENST00000391983 DCAF8L2P0C7V8 631 aa39.4■■■■□ 3.9
CAPN10-206ENST00000391983 DCAF1Q9Y4B6 1507 aa39.29■■■■□ 3.88
CAPN10-206ENST00000391983 ABCC9O60706 1549 aa38.64■■■■□ 3.78
CAPN10-206ENST00000391983 MYO15BQ96JP2 1530 aa38.55■■■■□ 3.76
CAPN10-206ENST00000391983 SUPT5HO00267 1087 aaKnown RBP38.35■■■■□ 3.73
CAPN10-206ENST00000391983 NACADO15069 1562 aa38.21■■■■□ 3.71
CAPN10-206ENST00000391983 SCRIBQ14160 1630 aa38.15■■■■□ 3.7
CAPN10-206ENST00000391983 RB1CC1Q8TDY2 1594 aa37.76■■■■□ 3.64
CAPN10-206ENST00000391983 RSF1Q96T23 1441 aaPredicted RBP37.3■■■■□ 3.56
CAPN10-206ENST00000391983 UNC13AQ9UPW8 1703 aa37.17■■■■□ 3.54
CAPN10-206ENST00000391983 CHIC1Q5VXU3 224 aa37.16■■■■□ 3.54
CAPN10-206ENST00000391983 CECR2Q9BXF3 1484 aa37.15■■■■□ 3.54
CAPN10-206ENST00000391983 MROH2BQ7Z745 1585 aa36.96■■■■□ 3.51
CAPN10-206ENST00000391983 HRCP23327 699 aa36.88■■■■□ 3.5
CAPN10-206ENST00000391983 BICRAQ9NZM4 1560 aa36.76■■■■□ 3.47
CAPN10-206ENST00000391983 BAZ1AQ9NRL2 1556 aaPredicted RBP36.71■■■■□ 3.47
CAPN10-206ENST00000391983 WIZO95785 1651 aa36.7■■■■□ 3.47
CAPN10-206ENST00000391983 PABPN1Q86U42 306 aaKnown RBP eCLIP36.65■■■■□ 3.46
CAPN10-206ENST00000391983 SMARCA4P51532 1647 aa36.53■■■■□ 3.44
CAPN10-206ENST00000391983 PCGF6Q9BYE7 350 aa36.48■■■■□ 3.43
CAPN10-206ENST00000391983 TOP2AP11388 1531 aaKnown RBP36.2■■■■□ 3.39
CAPN10-206ENST00000391983 LOC105371045A0A1W2PR82 267 aa36.06■■■■□ 3.36
CAPN10-206ENST00000391983 PPARGC1BQ86YN6 1023 aaKnown RBP35.99■■■■□ 3.35
CAPN10-206ENST00000391983 PEG3Q9GZU2 1588 aa35.98■■■■□ 3.35
CAPN10-206ENST00000391983 SMARCA2P51531 1590 aa35.95■■■■□ 3.34
CAPN10-206ENST00000391983 CCDC88BA6NC98 1476 aa35.94■■■■□ 3.34
CAPN10-206ENST00000391983 EIF4G1Q04637 1599 aaKnown RBP35.9■■■■□ 3.34
CAPN10-206ENST00000391983 TRIM41Q8WV44 630 aa35.89■■■■□ 3.34
CAPN10-206ENST00000391983 ATAD2BQ9ULI0 1458 aa35.8■■■■□ 3.32
CAPN10-206ENST00000391983 TRIM26Q12899 539 aaPredicted RBP35.72■■■■□ 3.31
CAPN10-206ENST00000391983 BAZ1BQ9UIG0 1483 aaKnown RBP35.6■■■■□ 3.29
CAPN10-206ENST00000391983 ABCC8Q09428 1581 aa35.46■■■■□ 3.27
CAPN10-206ENST00000391983 FAM9AQ8IZU1 332 aaPredicted RBP35.41■■■■□ 3.26
CAPN10-206ENST00000391983 NCAPD3P42695 1498 aa35.33■■■■□ 3.25
CAPN10-206ENST00000391983 HMGXB3Q12766 1538 aa35.28■■■■□ 3.24
CAPN10-206ENST00000391983 ZEB1P37275 1124 aaPredicted RBP35.18■■■■□ 3.22
CAPN10-206ENST00000391983 WRNQ14191 1432 aaPredicted RBP eCLIP35.04■■■■□ 3.2
CAPN10-206ENST00000391983 EHMT2Q96KQ7 1210 aa35.01■■■■□ 3.19
CAPN10-206ENST00000391983 SYNJ1O43426 1573 aa34.93■■■■□ 3.18
CAPN10-206ENST00000391983 SOGA1O94964 1423 aa34.92■■■■□ 3.18
CAPN10-206ENST00000391983 CC2D2AQ9P2K1 1620 aa34.91■■■■□ 3.18
CAPN10-206ENST00000391983 RUSC2Q8N2Y8 1516 aa34.8■■■■□ 3.16
CAPN10-206ENST00000391983 CFTRP13569 1480 aa34.75■■■■□ 3.15
CAPN10-206ENST00000391983 EEA1Q15075 1411 aa34.72■■■■□ 3.15
CAPN10-206ENST00000391983 TOP2BQ02880 1626 aa34.65■■■■□ 3.14
CAPN10-206ENST00000391983 CSRNP3Q8WYN3 585 aa34.64■■■■□ 3.14
CAPN10-206ENST00000391983 BIVM-ERCC5R4GMW8 1640 aa34.58■■■■□ 3.13
CAPN10-206ENST00000391983 PRDM2Q13029 1718 aa34.51■■■■□ 3.11
CAPN10-206ENST00000391983 CADPSQ9ULU8 1353 aa34.51■■■■□ 3.11
CAPN10-206ENST00000391983 CUX1P39880 1505 aa34.49■■■■□ 3.11
CAPN10-206ENST00000391983 TNIKQ9UKE5 1360 aa34.39■■■■□ 3.1
CAPN10-206ENST00000391983 GOLGA3Q08378 1498 aa34.37■■■■□ 3.09
CAPN10-206ENST00000391983 CEP162Q5TB80 1403 aa34.32■■■■□ 3.08
CAPN10-206ENST00000391983 KIF21BO75037 1637 aa34.31■■■■□ 3.08
CAPN10-206ENST00000391983 CEP164Q9UPV0 1460 aa34.29■■■■□ 3.08
CAPN10-206ENST00000391983 UBTFP17480 764 aaKnown RBP34.29■■■■□ 3.08
CAPN10-206ENST00000391983 SCAF1Q9H7N4 1312 aaKnown RBP34.27■■■■□ 3.08
CAPN10-206ENST00000391983 PELP1Q8IZL8 1130 aaKnown RBP34.2■■■■□ 3.07
CAPN10-206ENST00000391983 NESP48681 1621 aa34.16■■■■□ 3.06
CAPN10-206ENST00000391983 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP34.15■■■■□ 3.06
CAPN10-206ENST00000391983 FANCD2Q9BXW9 1451 aa34.15■■■■□ 3.06
CAPN10-206ENST00000391983 RAPGEF2Q9Y4G8 1499 aa34.15■■■■□ 3.06
CAPN10-206ENST00000391983 DNAJC5BQ9UF47 199 aa34.13■■■■□ 3.05
CAPN10-206ENST00000391983 CCER1Q8TC90 406 aaPredicted RBP34.12■■■■□ 3.05
CAPN10-206ENST00000391983 KIF27Q86VH2 1401 aa34.06■■■■□ 3.04
CAPN10-206ENST00000391983 PRXQ9BXM0 1461 aa34.03■■■■□ 3.04
CAPN10-206ENST00000391983 FGD5Q6ZNL6 1462 aa34■■■■□ 3.03
CAPN10-206ENST00000391983 LAMC3Q9Y6N6 1575 aa33.98■■■■□ 3.03
CAPN10-206ENST00000391983 ERICH3Q5RHP9 1530 aa33.95■■■■□ 3.02
CAPN10-206ENST00000391983 CUX2O14529 1486 aa33.9■■■■□ 3.02
CAPN10-206ENST00000391983 CLIP1P30622 1438 aa33.89■■■■□ 3.02
CAPN10-206ENST00000391983 DNMBPQ6XZF7 1577 aa33.89■■■■□ 3.02
CAPN10-206ENST00000391983 TOPBP1Q92547 1522 aa33.85■■■■□ 3.01
CAPN10-206ENST00000391983 ACIN1Q9UKV3 1341 aaKnown RBP33.81■■■■□ 3
CAPN10-206ENST00000391983 IGF1RP08069 1367 aa33.78■■■■□ 3
CAPN10-206ENST00000391983 POLA1P09884 1462 aaPredicted RBP33.76■■■□□ 2.99
CAPN10-206ENST00000391983 DIEXFQ68CQ4 756 aaKnown RBP33.73■■■□□ 2.99
CAPN10-206ENST00000391983 URB2Q14146 1524 aaKnown RBP33.73■■■□□ 2.99
CAPN10-206ENST00000391983 RAD54L2Q9Y4B4 1467 aa33.73■■■□□ 2.99
CAPN10-206ENST00000391983 TTBK1Q5TCY1 1321 aaPredicted RBP33.72■■■□□ 2.99
CAPN10-206ENST00000391983 PDS5BQ9NTI5 1447 aa33.72■■■□□ 2.99
CAPN10-206ENST00000391983 RANGAP1P46060 587 aaPredicted RBP33.71■■■□□ 2.99
CAPN10-206ENST00000391983 NEUROD1Q13562 356 aa33.69■■■□□ 2.98
CAPN10-206ENST00000391983 VPS8Q8N3P4 1428 aa33.65■■■□□ 2.98
CAPN10-206ENST00000391983 KIF21AQ7Z4S6 1674 aa33.65■■■□□ 2.98
CAPN10-206ENST00000391983 ABCA10Q8WWZ4 1543 aa33.65■■■□□ 2.98
CAPN10-206ENST00000391983 CARMIL1Q5VZK9 1371 aa33.59■■■□□ 2.97
CAPN10-206ENST00000391983 CENPBP07199 599 aaPredicted RBP33.54■■■□□ 2.96
CAPN10-206ENST00000391983 ARAP1Q96P48 1450 aa33.52■■■□□ 2.96
CAPN10-206ENST00000391983 WDR97A6NE52 1622 aa33.49■■■□□ 2.95
CAPN10-206ENST00000391983 GTF3C3Q9Y5Q9 886 aa33.4■■■□□ 2.94
CAPN10-206ENST00000391983 ARHGAP35Q9NRY4 1499 aa33.4■■■□□ 2.94
CAPN10-206ENST00000391983 ZNF316A6NFI3 1004 aaPredicted RBP33.37■■■□□ 2.93
CAPN10-206ENST00000391983 TDRD9Q8NDG6 1382 aaKnown RBP33.35■■■□□ 2.93
CAPN10-206ENST00000391983 ABCA5Q8WWZ7 1642 aa33.34■■■□□ 2.93
CAPN10-206ENST00000391983 CUL7Q14999 1698 aa33.32■■■□□ 2.92
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms