RNA–Protein interactions for RNA: ENST00000351231.7

CDC25A-202, Transcript of cell division cycle 25A, humanhuman

TSL 1 (best) BASIC

Gene CDC25A, Length 3,663 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC25A-202ENST00000351231 NISCHQ9Y2I1 1504 aa32.69■■■□□ 2.82
CDC25A-202ENST00000351231 SHROOM4Q9ULL8 1493 aa29.97■■■□□ 2.39
CDC25A-202ENST00000351231 SUPT5HO00267 1087 aaKnown RBP29.82■■■□□ 2.36
CDC25A-202ENST00000351231 DCAF8L2P0C7V8 631 aa29.33■■■□□ 2.29
CDC25A-202ENST00000351231 PCGF6Q9BYE7 350 aa28.77■■■□□ 2.2
CDC25A-202ENST00000351231 HRCP23327 699 aa28.45■■■□□ 2.14
CDC25A-202ENST00000351231 PPARGC1BQ86YN6 1023 aaKnown RBP28.41■■■□□ 2.14
CDC25A-202ENST00000351231 CHIC1Q5VXU3 224 aa28.39■■■□□ 2.14
CDC25A-202ENST00000351231 LOC105371045A0A1W2PR82 267 aa28.15■■■□□ 2.1
CDC25A-202ENST00000351231 EHMT2Q96KQ7 1210 aa28.13■■■□□ 2.09
CDC25A-202ENST00000351231 MYO15BQ96JP2 1530 aa28.03■■■□□ 2.08
CDC25A-202ENST00000351231 FAM9AQ8IZU1 332 aaPredicted RBP27.82■■■□□ 2.04
CDC25A-202ENST00000351231 ZCCHC6Q5VYS8 1495 aaKnown RBP27.55■■■□□ 2
CDC25A-202ENST00000351231 TRIM26Q12899 539 aaPredicted RBP27.49■■□□□ 1.99
CDC25A-202ENST00000351231 TRIM41Q8WV44 630 aa27.35■■□□□ 1.97
CDC25A-202ENST00000351231 TTBK1Q5TCY1 1321 aaPredicted RBP27.24■■□□□ 1.95
CDC25A-202ENST00000351231 DCAF1Q9Y4B6 1507 aa27.03■■□□□ 1.92
CDC25A-202ENST00000351231 ZEB1P37275 1124 aaPredicted RBP27.02■■□□□ 1.92
CDC25A-202ENST00000351231 CCER1Q8TC90 406 aaPredicted RBP26.87■■□□□ 1.89
CDC25A-202ENST00000351231 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.85■■□□□ 1.89
CDC25A-202ENST00000351231 CCDC180Q9P1Z9 1646 aa26.77■■□□□ 1.88
CDC25A-202ENST00000351231 SCAF1Q9H7N4 1312 aaKnown RBP26.72■■□□□ 1.87
CDC25A-202ENST00000351231 PELP1Q8IZL8 1130 aaKnown RBP26.57■■□□□ 1.84
CDC25A-202ENST00000351231 YTHDC1Q96MU7 727 aaKnown RBP26.49■■□□□ 1.83
CDC25A-202ENST00000351231 RSF1Q96T23 1441 aaPredicted RBP26.38■■□□□ 1.81
CDC25A-202ENST00000351231 SCRIBQ14160 1630 aa26.37■■□□□ 1.81
CDC25A-202ENST00000351231 DIEXFQ68CQ4 756 aaKnown RBP26.35■■□□□ 1.81
CDC25A-202ENST00000351231 NEUROD1Q13562 356 aa26.34■■□□□ 1.81
CDC25A-202ENST00000351231 RANGAP1P46060 587 aaPredicted RBP26.33■■□□□ 1.81
CDC25A-202ENST00000351231 CENPBP07199 599 aaPredicted RBP26.33■■□□□ 1.8
CDC25A-202ENST00000351231 GTF3C3Q9Y5Q9 886 aa26.33■■□□□ 1.8
CDC25A-202ENST00000351231 UBTFP17480 764 aaKnown RBP26.28■■□□□ 1.8
CDC25A-202ENST00000351231 ACIN1Q9UKV3 1341 aaKnown RBP26.26■■□□□ 1.79
CDC25A-202ENST00000351231 HNRNPUL2Q1KMD3 747 aaKnown RBP26.11■■□□□ 1.77
CDC25A-202ENST00000351231 RB1CC1Q8TDY2 1594 aa26.11■■□□□ 1.77
CDC25A-202ENST00000351231 ABCC9O60706 1549 aa26.05■■□□□ 1.76
CDC25A-202ENST00000351231 CECR2Q9BXF3 1484 aa25.96■■□□□ 1.75
CDC25A-202ENST00000351231 APLP2Q06481 763 aa25.87■■□□□ 1.73
CDC25A-202ENST00000351231 ZNF316A6NFI3 1004 aaPredicted RBP25.8■■□□□ 1.72
CDC25A-202ENST00000351231 MROH2BQ7Z745 1585 aa25.7■■□□□ 1.7
CDC25A-202ENST00000351231 MIER1Q8N108 512 aa25.68■■□□□ 1.7
CDC25A-202ENST00000351231 CSRNP3Q8WYN3 585 aa25.66■■□□□ 1.7
CDC25A-202ENST00000351231 PABPN1Q86U42 306 aaKnown RBP eCLIP25.59■■□□□ 1.69
CDC25A-202ENST00000351231 CEP162Q5TB80 1403 aa25.56■■□□□ 1.68
CDC25A-202ENST00000351231 ITGAEP38570 1179 aa25.53■■□□□ 1.68
CDC25A-202ENST00000351231 SOGA1O94964 1423 aa25.52■■□□□ 1.68
CDC25A-202ENST00000351231 WIZO95785 1651 aa25.52■■□□□ 1.68
CDC25A-202ENST00000351231 ABCC8Q09428 1581 aa25.5■■□□□ 1.67
CDC25A-202ENST00000351231 CCDC88BA6NC98 1476 aa25.48■■□□□ 1.67
CDC25A-202ENST00000351231 RUSC2Q8N2Y8 1516 aa25.31■■□□□ 1.64
CDC25A-202ENST00000351231 MYT1Q01538 1121 aa25.28■■□□□ 1.64
CDC25A-202ENST00000351231 TNIKQ9UKE5 1360 aa25.26■■□□□ 1.63
CDC25A-202ENST00000351231 BCANQ96GW7 911 aa25.23■■□□□ 1.63
CDC25A-202ENST00000351231 ATP1B4Q9UN42 357 aaPredicted RBP25.18■■□□□ 1.62
CDC25A-202ENST00000351231 NACADO15069 1562 aa25.1■■□□□ 1.61
CDC25A-202ENST00000351231 CLIP1P30622 1438 aa25.1■■□□□ 1.61
CDC25A-202ENST00000351231 WRNQ14191 1432 aaPredicted RBP eCLIP25.06■■□□□ 1.6
CDC25A-202ENST00000351231 BAZ1AQ9NRL2 1556 aaPredicted RBP25.05■■□□□ 1.6
CDC25A-202ENST00000351231 GOLGA3Q08378 1498 aa25.05■■□□□ 1.6
CDC25A-202ENST00000351231 SUPT16HQ9Y5B9 1047 aaKnown RBP24.9■■□□□ 1.58
CDC25A-202ENST00000351231 HIRIP3Q9BW71 556 aaPredicted RBP24.9■■□□□ 1.58
CDC25A-202ENST00000351231 EEA1Q15075 1411 aa24.89■■□□□ 1.57
CDC25A-202ENST00000351231 KANK4Q5T7N3 995 aaPredicted RBP24.86■■□□□ 1.57
CDC25A-202ENST00000351231 KCNH8Q96L42 1107 aa24.85■■□□□ 1.57
CDC25A-202ENST00000351231 FAM50AQ14320 339 aaKnown RBP24.83■■□□□ 1.57
CDC25A-202ENST00000351231 DDX10Q13206 875 aaKnown RBP24.83■■□□□ 1.57
CDC25A-202ENST00000351231 TOP2AP11388 1531 aaKnown RBP24.83■■□□□ 1.57
CDC25A-202ENST00000351231 CEP164Q9UPV0 1460 aa24.79■■□□□ 1.56
CDC25A-202ENST00000351231 FKBP8Q14318 412 aa24.77■■□□□ 1.56
CDC25A-202ENST00000351231 P3H3Q8IVL6 736 aa24.77■■□□□ 1.56
CDC25A-202ENST00000351231 NEFLP07196 543 aa24.77■■□□□ 1.56
CDC25A-202ENST00000351231 SMARCA2P51531 1590 aa24.77■■□□□ 1.56
CDC25A-202ENST00000351231 VPS8Q8N3P4 1428 aa24.75■■□□□ 1.55
CDC25A-202ENST00000351231 RAPGEF2Q9Y4G8 1499 aa24.72■■□□□ 1.55
CDC25A-202ENST00000351231 TRIM52Q96A61 297 aa24.71■■□□□ 1.55
CDC25A-202ENST00000351231 SMARCA4P51532 1647 aa24.67■■□□□ 1.54
CDC25A-202ENST00000351231 SIN3AQ96ST3 1273 aa24.64■■□□□ 1.54
CDC25A-202ENST00000351231 DHX57Q6P158 1386 aaKnown RBP24.62■■□□□ 1.53
CDC25A-202ENST00000351231 TSHZ2Q9NRE2 1034 aa24.61■■□□□ 1.53
CDC25A-202ENST00000351231 CNGB1Q14028 1251 aaPredicted RBP24.58■■□□□ 1.52
CDC25A-202ENST00000351231 EIF4G1Q04637 1599 aaKnown RBP24.56■■□□□ 1.52
CDC25A-202ENST00000351231 IRX6P78412 446 aaPredicted RBP24.48■■□□□ 1.51
CDC25A-202ENST00000351231 ANP32CO43423 234 aa24.46■■□□□ 1.51
CDC25A-202ENST00000351231 SYNJ1O43426 1573 aa24.45■■□□□ 1.5
CDC25A-202ENST00000351231 ERICH6Q7L0X2 663 aa24.43■■□□□ 1.5
CDC25A-202ENST00000351231 ANP32EQ9BTT0 268 aa24.43■■□□□ 1.5
CDC25A-202ENST00000351231 BAZ1BQ9UIG0 1483 aaKnown RBP24.42■■□□□ 1.5
CDC25A-202ENST00000351231 CLSPNQ9HAW4 1339 aa24.42■■□□□ 1.5
CDC25A-202ENST00000351231 CCNB3Q8WWL7 1395 aa24.4■■□□□ 1.5
CDC25A-202ENST00000351231 KIF21BO75037 1637 aa24.4■■□□□ 1.5
CDC25A-202ENST00000351231 RAB3GAP2Q9H2M9 1393 aa24.34■■□□□ 1.49
CDC25A-202ENST00000351231 HNRNPUQ00839 825 aaKnown RBP eCLIP24.29■■□□□ 1.48
CDC25A-202ENST00000351231 POLR3GLQ9BT43 218 aa24.25■■□□□ 1.47
CDC25A-202ENST00000351231 RBM19Q9Y4C8 960 aaKnown RBP24.22■■□□□ 1.47
CDC25A-202ENST00000351231 ARID3CA6NKF2 412 aa24.22■■□□□ 1.47
CDC25A-202ENST00000351231 ARAP1Q96P48 1450 aa24.21■■□□□ 1.47
CDC25A-202ENST00000351231 ATAD2BQ9ULI0 1458 aa24.21■■□□□ 1.47
CDC25A-202ENST00000351231 KIF27Q86VH2 1401 aa24.19■■□□□ 1.46
CDC25A-202ENST00000351231 SENP3-EIF4A1A0A087X0R7 540 aa24.19■■□□□ 1.46
CDC25A-202ENST00000351231 TONSLQ96HA7 1378 aa24.17■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms