RNA–Protein interactions for RNA: ENST00000621097.4

RFC2-213, Transcript of replication factor C subunit 2, humanhuman

TSL 5 BASIC

Gene RFC2, Length 1,635 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC2-213ENST00000621097 NISCHQ9Y2I1 1504 aa44.87■■■■■ 4.77
RFC2-213ENST00000621097 CCDC180Q9P1Z9 1646 aa39.45■■■■□ 3.91
RFC2-213ENST00000621097 ABCC9O60706 1549 aa38.16■■■■□ 3.7
RFC2-213ENST00000621097 ZCCHC6Q5VYS8 1495 aaKnown RBP37.53■■■■□ 3.6
RFC2-213ENST00000621097 DCAF8L2P0C7V8 631 aa37.25■■■■□ 3.55
RFC2-213ENST00000621097 DCAF1Q9Y4B6 1507 aa37.12■■■■□ 3.53
RFC2-213ENST00000621097 MYO15BQ96JP2 1530 aa36.98■■■■□ 3.51
RFC2-213ENST00000621097 NACADO15069 1562 aa36.95■■■■□ 3.51
RFC2-213ENST00000621097 RB1CC1Q8TDY2 1594 aa36.8■■■■□ 3.48
RFC2-213ENST00000621097 SCRIBQ14160 1630 aa36.14■■■■□ 3.38
RFC2-213ENST00000621097 UNC13AQ9UPW8 1703 aa36.12■■■■□ 3.37
RFC2-213ENST00000621097 SHROOM4Q9ULL8 1493 aa36.01■■■■□ 3.35
RFC2-213ENST00000621097 BICRAQ9NZM4 1560 aa35.79■■■■□ 3.32
RFC2-213ENST00000621097 PABPN1Q86U42 306 aaKnown RBP eCLIP35.68■■■■□ 3.3
RFC2-213ENST00000621097 CECR2Q9BXF3 1484 aa34.93■■■■□ 3.18
RFC2-213ENST00000621097 DNAJC5BQ9UF47 199 aa34.84■■■■□ 3.17
RFC2-213ENST00000621097 EIF4G1Q04637 1599 aaKnown RBP34.75■■■■□ 3.15
RFC2-213ENST00000621097 BAZ1AQ9NRL2 1556 aaPredicted RBP34.69■■■■□ 3.14
RFC2-213ENST00000621097 MROH2BQ7Z745 1585 aa34.62■■■■□ 3.13
RFC2-213ENST00000621097 SMARCA4P51532 1647 aa34.62■■■■□ 3.13
RFC2-213ENST00000621097 CC2D2AQ9P2K1 1620 aa34.55■■■■□ 3.12
RFC2-213ENST00000621097 RSF1Q96T23 1441 aaPredicted RBP34.53■■■■□ 3.12
RFC2-213ENST00000621097 ATAD2BQ9ULI0 1458 aa34.28■■■■□ 3.08
RFC2-213ENST00000621097 SUPT5HO00267 1087 aaKnown RBP34.28■■■■□ 3.08
RFC2-213ENST00000621097 PEG3Q9GZU2 1588 aa34.27■■■■□ 3.08
RFC2-213ENST00000621097 WIZO95785 1651 aa34.26■■■■□ 3.08
RFC2-213ENST00000621097 SMARCA2P51531 1590 aa34.22■■■■□ 3.07
RFC2-213ENST00000621097 NCAPD3P42695 1498 aa34.14■■■■□ 3.06
RFC2-213ENST00000621097 BAZ1BQ9UIG0 1483 aaKnown RBP34.01■■■■□ 3.04
RFC2-213ENST00000621097 HMGXB3Q12766 1538 aa33.99■■■■□ 3.03
RFC2-213ENST00000621097 TOP2AP11388 1531 aaKnown RBP33.92■■■■□ 3.02
RFC2-213ENST00000621097 CCDC88BA6NC98 1476 aa33.57■■■□□ 2.96
RFC2-213ENST00000621097 CADPSQ9ULU8 1353 aa33.2■■■□□ 2.91
RFC2-213ENST00000621097 CFTRP13569 1480 aa33.16■■■□□ 2.9
RFC2-213ENST00000621097 NESP48681 1621 aa33.15■■■□□ 2.9
RFC2-213ENST00000621097 LAMC3Q9Y6N6 1575 aa33.05■■■□□ 2.88
RFC2-213ENST00000621097 PRDM2Q13029 1718 aa32.85■■■□□ 2.85
RFC2-213ENST00000621097 PDS5BQ9NTI5 1447 aa32.83■■■□□ 2.85
RFC2-213ENST00000621097 FANCD2Q9BXW9 1451 aa32.81■■■□□ 2.84
RFC2-213ENST00000621097 KIF21AQ7Z4S6 1674 aa32.79■■■□□ 2.84
RFC2-213ENST00000621097 ERCC6Q03468 1493 aa32.78■■■□□ 2.84
RFC2-213ENST00000621097 CEP164Q9UPV0 1460 aa32.66■■■□□ 2.82
RFC2-213ENST00000621097 THOC2Q8NI27 1593 aaKnown RBP32.62■■■□□ 2.81
RFC2-213ENST00000621097 ABCC8Q09428 1581 aa32.58■■■□□ 2.81
RFC2-213ENST00000621097 WRNQ14191 1432 aaPredicted RBP eCLIP32.5■■■□□ 2.79
RFC2-213ENST00000621097 MRC2Q9UBG0 1479 aa32.45■■■□□ 2.79
RFC2-213ENST00000621097 CHIC1Q5VXU3 224 aa32.45■■■□□ 2.79
RFC2-213ENST00000621097 URB2Q14146 1524 aaKnown RBP32.44■■■□□ 2.78
RFC2-213ENST00000621097 CUX1P39880 1505 aa32.43■■■□□ 2.78
RFC2-213ENST00000621097 SYNJ1O43426 1573 aa32.37■■■□□ 2.77
RFC2-213ENST00000621097 WDR62O43379 1518 aa32.37■■■□□ 2.77
RFC2-213ENST00000621097 TOPBP1Q92547 1522 aa32.37■■■□□ 2.77
RFC2-213ENST00000621097 DNMBPQ6XZF7 1577 aa32.36■■■□□ 2.77
RFC2-213ENST00000621097 CUX2O14529 1486 aa32.35■■■□□ 2.77
RFC2-213ENST00000621097 TOP2BQ02880 1626 aa32.31■■■□□ 2.76
RFC2-213ENST00000621097 TRIM41Q8WV44 630 aa32.3■■■□□ 2.76
RFC2-213ENST00000621097 BIVM-ERCC5R4GMW8 1640 aa32.28■■■□□ 2.76
RFC2-213ENST00000621097 FGD5Q6ZNL6 1462 aa32.18■■■□□ 2.74
RFC2-213ENST00000621097 POLA1P09884 1462 aaPredicted RBP32.15■■■□□ 2.74
RFC2-213ENST00000621097 SOGA1O94964 1423 aa32.03■■■□□ 2.72
RFC2-213ENST00000621097 RAD54L2Q9Y4B4 1467 aa32.03■■■□□ 2.72
RFC2-213ENST00000621097 IFT140Q96RY7 1462 aa31.94■■■□□ 2.7
RFC2-213ENST00000621097 TARBP1Q13395 1621 aaKnown RBP31.94■■■□□ 2.7
RFC2-213ENST00000621097 ABCA10Q8WWZ4 1543 aa31.9■■■□□ 2.7
RFC2-213ENST00000621097 WDR97A6NE52 1622 aa31.82■■■□□ 2.68
RFC2-213ENST00000621097 TDRD9Q8NDG6 1382 aaKnown RBP31.8■■■□□ 2.68
RFC2-213ENST00000621097 ZNF608Q9ULD9 1512 aaPredicted RBP31.8■■■□□ 2.68
RFC2-213ENST00000621097 RUSC2Q8N2Y8 1516 aa31.78■■■□□ 2.68
RFC2-213ENST00000621097 KIF27Q86VH2 1401 aa31.75■■■□□ 2.67
RFC2-213ENST00000621097 AQRO60306 1485 aaKnown RBP eCLIP31.72■■■□□ 2.671e-6■■■□□ 18.3
RFC2-213ENST00000621097 ABCA5Q8WWZ7 1642 aa31.68■■■□□ 2.66
RFC2-213ENST00000621097 GAPVD1Q14C86 1478 aa31.67■■■□□ 2.66
RFC2-213ENST00000621097 FAM9AQ8IZU1 332 aaPredicted RBP31.66■■■□□ 2.66
RFC2-213ENST00000621097 EIF4G3O43432 1585 aaKnown RBP31.64■■■□□ 2.66
RFC2-213ENST00000621097 EEA1Q15075 1411 aa31.63■■■□□ 2.65
RFC2-213ENST00000621097 IGF1RP08069 1367 aa31.58■■■□□ 2.65
RFC2-213ENST00000621097 CSRNP3Q8WYN3 585 aa31.55■■■□□ 2.64
RFC2-213ENST00000621097 GRIN2BQ13224 1484 aa31.54■■■□□ 2.64
RFC2-213ENST00000621097 ERICH3Q5RHP9 1530 aa31.51■■■□□ 2.63
RFC2-213ENST00000621097 PBRM1Q86U86 1689 aa31.49■■■□□ 2.63
RFC2-213ENST00000621097 SNAPC4Q5SXM2 1469 aa31.4■■■□□ 2.62
RFC2-213ENST00000621097 CARMIL1Q5VZK9 1371 aa31.38■■■□□ 2.61
RFC2-213ENST00000621097 MAGI1Q96QZ7 1491 aaPredicted RBP31.36■■■□□ 2.61
RFC2-213ENST00000621097 PRXQ9BXM0 1461 aa31.36■■■□□ 2.61
RFC2-213ENST00000621097 CUL7Q14999 1698 aa31.33■■■□□ 2.61
RFC2-213ENST00000621097 FHAD1B1AJZ9 1412 aa31.32■■■□□ 2.61
RFC2-213ENST00000621097 ADAMTS12P58397 1594 aa31.32■■■□□ 2.6
RFC2-213ENST00000621097 RAPGEF2Q9Y4G8 1499 aa31.25■■■□□ 2.59
RFC2-213ENST00000621097 SYNJ2O15056 1496 aa31.25■■■□□ 2.59
RFC2-213ENST00000621097 KIF21BO75037 1637 aa31.24■■■□□ 2.59
RFC2-213ENST00000621097 CHD1O14646 1710 aa31.22■■■□□ 2.59
RFC2-213ENST00000621097 CHMP7Q8WUX9 453 aaPredicted RBP31.2■■■□□ 2.59
RFC2-213ENST00000621097 EHMT2Q96KQ7 1210 aa31.2■■■□□ 2.59
RFC2-213ENST00000621097 FBLN2P98095 1184 aa31.19■■■□□ 2.58
RFC2-213ENST00000621097 LOC105371045A0A1W2PR82 267 aa31.16■■■□□ 2.58
RFC2-213ENST00000621097 GOLGA3Q08378 1498 aa31.14■■■□□ 2.58
RFC2-213ENST00000621097 GRIN2AQ12879 1464 aa31.14■■■□□ 2.58
RFC2-213ENST00000621097 UBTFP17480 764 aaKnown RBP31.04■■■□□ 2.56
RFC2-213ENST00000621097 DNAJC5Q9H3Z4 198 aa31.02■■■□□ 2.56
RFC2-213ENST00000621097 NUP160Q12769 1436 aa30.99■■■□□ 2.55
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms