RNA–Protein interactions for RNA: ENST00000302506.7

CDC25A-201, Transcript of cell division cycle 25A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC25A, Length 3,783 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC25A-201ENST00000302506 NISCHQ9Y2I1 1504 aa34.97■■■■□ 3.19
CDC25A-201ENST00000302506 DCAF8L2P0C7V8 631 aa31.82■■■□□ 2.68
CDC25A-201ENST00000302506 SHROOM4Q9ULL8 1493 aa31.62■■■□□ 2.65
CDC25A-201ENST00000302506 SUPT5HO00267 1087 aaKnown RBP31.2■■■□□ 2.59
CDC25A-201ENST00000302506 EHMT2Q96KQ7 1210 aa29.52■■■□□ 2.32
CDC25A-201ENST00000302506 ZCCHC6Q5VYS8 1495 aaKnown RBP29.3■■■□□ 2.28
CDC25A-201ENST00000302506 CHIC1Q5VXU3 224 aa29.24■■■□□ 2.27
CDC25A-201ENST00000302506 FAM9AQ8IZU1 332 aaPredicted RBP29.15■■■□□ 2.26
CDC25A-201ENST00000302506 PCGF6Q9BYE7 350 aa29.03■■■□□ 2.24
CDC25A-201ENST00000302506 LOC105371045A0A1W2PR82 267 aa28.98■■■□□ 2.23
CDC25A-201ENST00000302506 CCDC180Q9P1Z9 1646 aa28.98■■■□□ 2.23
CDC25A-201ENST00000302506 ABCC9O60706 1549 aa28.85■■■□□ 2.21
CDC25A-201ENST00000302506 TRIM41Q8WV44 630 aa28.7■■■□□ 2.18
CDC25A-201ENST00000302506 MYO15BQ96JP2 1530 aa28.51■■■□□ 2.15
CDC25A-201ENST00000302506 SCRIBQ14160 1630 aa28.41■■■□□ 2.14
CDC25A-201ENST00000302506 TTBK1Q5TCY1 1321 aaPredicted RBP28.4■■■□□ 2.14
CDC25A-201ENST00000302506 PPARGC1BQ86YN6 1023 aaKnown RBP28.38■■■□□ 2.13
CDC25A-201ENST00000302506 PABPN1Q86U42 306 aaKnown RBP eCLIP28.17■■■□□ 2.1
CDC25A-201ENST00000302506 HRCP23327 699 aa28.12■■■□□ 2.09
CDC25A-201ENST00000302506 RANGAP1P46060 587 aaPredicted RBP27.96■■■□□ 2.07
CDC25A-201ENST00000302506 RSF1Q96T23 1441 aaPredicted RBP27.93■■■□□ 2.06
CDC25A-201ENST00000302506 DCAF1Q9Y4B6 1507 aa27.92■■■□□ 2.06
CDC25A-201ENST00000302506 TRIM26Q12899 539 aaPredicted RBP27.87■■■□□ 2.05
CDC25A-201ENST00000302506 CECR2Q9BXF3 1484 aa27.76■■■□□ 2.04
CDC25A-201ENST00000302506 UBTFP17480 764 aaKnown RBP27.73■■■□□ 2.03
CDC25A-201ENST00000302506 RB1CC1Q8TDY2 1594 aa27.49■■□□□ 1.99
CDC25A-201ENST00000302506 CCER1Q8TC90 406 aaPredicted RBP27.45■■□□□ 1.98
CDC25A-201ENST00000302506 MROH2BQ7Z745 1585 aa27.41■■□□□ 1.98
CDC25A-201ENST00000302506 NACADO15069 1562 aa27.38■■□□□ 1.97
CDC25A-201ENST00000302506 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.37■■□□□ 1.97
CDC25A-201ENST00000302506 APLP2Q06481 763 aa27.25■■□□□ 1.95
CDC25A-201ENST00000302506 ZEB1P37275 1124 aaPredicted RBP27.17■■□□□ 1.94
CDC25A-201ENST00000302506 WIZO95785 1651 aa27.16■■□□□ 1.94
CDC25A-201ENST00000302506 HNRNPUL2Q1KMD3 747 aaKnown RBP27.07■■□□□ 1.92
CDC25A-201ENST00000302506 CSRNP3Q8WYN3 585 aa27.04■■□□□ 1.92
CDC25A-201ENST00000302506 ATP1B4Q9UN42 357 aaPredicted RBP26.92■■□□□ 1.9
CDC25A-201ENST00000302506 BAZ1AQ9NRL2 1556 aaPredicted RBP26.92■■□□□ 1.9
CDC25A-201ENST00000302506 ABCC8Q09428 1581 aa26.91■■□□□ 1.9
CDC25A-201ENST00000302506 CCDC88BA6NC98 1476 aa26.82■■□□□ 1.88
CDC25A-201ENST00000302506 SOGA1O94964 1423 aa26.81■■□□□ 1.88
CDC25A-201ENST00000302506 ITGAEP38570 1179 aa26.8■■□□□ 1.88
CDC25A-201ENST00000302506 YTHDC1Q96MU7 727 aaKnown RBP26.64■■□□□ 1.86
CDC25A-201ENST00000302506 CEP162Q5TB80 1403 aa26.59■■□□□ 1.85
CDC25A-201ENST00000302506 RUSC2Q8N2Y8 1516 aa26.58■■□□□ 1.85
CDC25A-201ENST00000302506 WRNQ14191 1432 aaPredicted RBP eCLIP26.57■■□□□ 1.84
CDC25A-201ENST00000302506 SMARCA4P51532 1647 aa26.52■■□□□ 1.84
CDC25A-201ENST00000302506 TOP2AP11388 1531 aaKnown RBP26.49■■□□□ 1.83
CDC25A-201ENST00000302506 BAZ1BQ9UIG0 1483 aaKnown RBP26.49■■□□□ 1.83
CDC25A-201ENST00000302506 DIEXFQ68CQ4 756 aaKnown RBP26.45■■□□□ 1.83
CDC25A-201ENST00000302506 P3H3Q8IVL6 736 aa26.45■■□□□ 1.83
CDC25A-201ENST00000302506 SMARCA2P51531 1590 aa26.35■■□□□ 1.81
CDC25A-201ENST00000302506 TNIKQ9UKE5 1360 aa26.33■■□□□ 1.81
CDC25A-201ENST00000302506 CLIP1P30622 1438 aa26.3■■□□□ 1.8
CDC25A-201ENST00000302506 GOLGA3Q08378 1498 aa26.26■■□□□ 1.79
CDC25A-201ENST00000302506 ATAD2BQ9ULI0 1458 aa26.23■■□□□ 1.79
CDC25A-201ENST00000302506 CENPBP07199 599 aaPredicted RBP26.2■■□□□ 1.78
CDC25A-201ENST00000302506 FAM50AQ14320 339 aaKnown RBP26.16■■□□□ 1.78
CDC25A-201ENST00000302506 EEA1Q15075 1411 aa26.16■■□□□ 1.78
CDC25A-201ENST00000302506 CEP164Q9UPV0 1460 aa26.07■■□□□ 1.76
CDC25A-201ENST00000302506 BICRAQ9NZM4 1560 aa26.06■■□□□ 1.76
CDC25A-201ENST00000302506 ZNF316A6NFI3 1004 aaPredicted RBP26.06■■□□□ 1.76
CDC25A-201ENST00000302506 UNC13AQ9UPW8 1703 aa26.05■■□□□ 1.76
CDC25A-201ENST00000302506 ARID3CA6NKF2 412 aa26.04■■□□□ 1.76
CDC25A-201ENST00000302506 RAPGEF2Q9Y4G8 1499 aa26.02■■□□□ 1.76
CDC25A-201ENST00000302506 NEUROD1Q13562 356 aa25.99■■□□□ 1.75
CDC25A-201ENST00000302506 KANK4Q5T7N3 995 aaPredicted RBP25.97■■□□□ 1.75
CDC25A-201ENST00000302506 SCAF1Q9H7N4 1312 aaKnown RBP25.94■■□□□ 1.74
CDC25A-201ENST00000302506 GTF3C3Q9Y5Q9 886 aa25.92■■□□□ 1.74
CDC25A-201ENST00000302506 SYNJ1O43426 1573 aa25.89■■□□□ 1.73
CDC25A-201ENST00000302506 KIF27Q86VH2 1401 aa25.84■■□□□ 1.73
CDC25A-201ENST00000302506 ACIN1Q9UKV3 1341 aaKnown RBP25.82■■□□□ 1.72
CDC25A-201ENST00000302506 VPS8Q8N3P4 1428 aa25.8■■□□□ 1.72
CDC25A-201ENST00000302506 MIER1Q8N108 512 aa25.79■■□□□ 1.72
CDC25A-201ENST00000302506 CUX2O14529 1486 aa25.76■■□□□ 1.71
CDC25A-201ENST00000302506 EIF4G1Q04637 1599 aaKnown RBP25.72■■□□□ 1.71
CDC25A-201ENST00000302506 HIRIP3Q9BW71 556 aaPredicted RBP25.67■■□□□ 1.7
CDC25A-201ENST00000302506 FBLN2P98095 1184 aa25.64■■□□□ 1.7
CDC25A-201ENST00000302506 CARMIL1Q5VZK9 1371 aa25.62■■□□□ 1.69
CDC25A-201ENST00000302506 CNGB1Q14028 1251 aaPredicted RBP25.61■■□□□ 1.69
CDC25A-201ENST00000302506 CADPSQ9ULU8 1353 aa25.56■■□□□ 1.68
CDC25A-201ENST00000302506 NCAPD3P42695 1498 aa25.53■■□□□ 1.68
CDC25A-201ENST00000302506 CHIC2Q9UKJ5 165 aa25.53■■□□□ 1.68
CDC25A-201ENST00000302506 TRIM52Q96A61 297 aa25.53■■□□□ 1.68
CDC25A-201ENST00000302506 DNAJC5BQ9UF47 199 aa25.51■■□□□ 1.67
CDC25A-201ENST00000302506 SIN3AQ96ST3 1273 aa25.51■■□□□ 1.67
CDC25A-201ENST00000302506 TDRD9Q8NDG6 1382 aaKnown RBP25.49■■□□□ 1.67
CDC25A-201ENST00000302506 KIF21BO75037 1637 aa25.46■■□□□ 1.67
CDC25A-201ENST00000302506 CCNB3Q8WWL7 1395 aa25.43■■□□□ 1.66
CDC25A-201ENST00000302506 CUX1P39880 1505 aa25.43■■□□□ 1.66
CDC25A-201ENST00000302506 IGF1RP08069 1367 aa25.42■■□□□ 1.66
CDC25A-201ENST00000302506 DDX10Q13206 875 aaKnown RBP25.42■■□□□ 1.66
CDC25A-201ENST00000302506 PEG3Q9GZU2 1588 aa25.4■■□□□ 1.66
CDC25A-201ENST00000302506 POLR3GLQ9BT43 218 aa25.39■■□□□ 1.66
CDC25A-201ENST00000302506 ARAP1Q96P48 1450 aa25.39■■□□□ 1.65
CDC25A-201ENST00000302506 RAD54L2Q9Y4B4 1467 aa25.37■■□□□ 1.65
CDC25A-201ENST00000302506 MTUS2Q5JR59 1369 aa25.36■■□□□ 1.65
CDC25A-201ENST00000302506 CFTRP13569 1480 aa25.34■■□□□ 1.65
CDC25A-201ENST00000302506 TOP2BQ02880 1626 aa25.34■■□□□ 1.65
CDC25A-201ENST00000302506 RRP7BPQ9NSQ0 103 aa25.33■■□□□ 1.65
CDC25A-201ENST00000302506 FGD5Q6ZNL6 1462 aa25.33■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms