RNA–Protein interactions for RNA: ENST00000448097.6

KDM6B-202, Transcript of lysine demethylase 6B, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene KDM6B, Length 5,422 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM6B-202ENST00000448097 NISCHQ9Y2I1 1504 aa30.07■■■□□ 2.4
KDM6B-202ENST00000448097 DCAF8L2P0C7V8 631 aa29.36■■■□□ 2.29
KDM6B-202ENST00000448097 SUPT5HO00267 1087 aaKnown RBP28.08■■■□□ 2.09
KDM6B-202ENST00000448097 SHROOM4Q9ULL8 1493 aa27.9■■■□□ 2.06
KDM6B-202ENST00000448097 EHMT2Q96KQ7 1210 aa26.64■■□□□ 1.86
KDM6B-202ENST00000448097 FAM9AQ8IZU1 332 aaPredicted RBP26.32■■□□□ 1.8
KDM6B-202ENST00000448097 APLP2Q06481 763 aa26.21■■□□□ 1.79
KDM6B-202ENST00000448097 TRIM41Q8WV44 630 aa26.15■■□□□ 1.78
KDM6B-202ENST00000448097 PCGF6Q9BYE7 350 aa25.96■■□□□ 1.75
KDM6B-202ENST00000448097 TTBK1Q5TCY1 1321 aaPredicted RBP25.74■■□□□ 1.71
KDM6B-202ENST00000448097 UBTFP17480 764 aaKnown RBP25.61■■□□□ 1.69
KDM6B-202ENST00000448097 RANGAP1P46060 587 aaPredicted RBP25.59■■□□□ 1.69
KDM6B-202ENST00000448097 ZEB1P37275 1124 aaPredicted RBP25.54■■□□□ 1.68
KDM6B-202ENST00000448097 CHIC1Q5VXU3 224 aa25.48■■□□□ 1.67
KDM6B-202ENST00000448097 ABCC9O60706 1549 aa25.42■■□□□ 1.66
KDM6B-202ENST00000448097 CCER1Q8TC90 406 aaPredicted RBP25.38■■□□□ 1.65
KDM6B-202ENST00000448097 ATP1B4Q9UN42 357 aaPredicted RBP25.29■■□□□ 1.64
KDM6B-202ENST00000448097 PELP1Q8IZL8 1130 aaKnown RBP25.29■■□□□ 1.64
KDM6B-202ENST00000448097 TRIM26Q12899 539 aaPredicted RBP25.19■■□□□ 1.62
KDM6B-202ENST00000448097 LOC105371045A0A1W2PR82 267 aa25.15■■□□□ 1.62
KDM6B-202ENST00000448097 PPARGC1BQ86YN6 1023 aaKnown RBP25.08■■□□□ 1.6
KDM6B-202ENST00000448097 ZCCHC6Q5VYS8 1495 aaKnown RBP25.01■■□□□ 1.59
KDM6B-202ENST00000448097 PABPN1Q86U42 306 aaKnown RBP eCLIP24.99■■□□□ 1.59
KDM6B-202ENST00000448097 CENPBP07199 599 aaPredicted RBP24.96■■□□□ 1.59
KDM6B-202ENST00000448097 CCDC180Q9P1Z9 1646 aa24.96■■□□□ 1.59
KDM6B-202ENST00000448097 HRCP23327 699 aa24.85■■□□□ 1.57
KDM6B-202ENST00000448097 SCRIBQ14160 1630 aa24.62■■□□□ 1.53
KDM6B-202ENST00000448097 MYT1Q01538 1121 aa24.6■■□□□ 1.53
KDM6B-202ENST00000448097 ITGAEP38570 1179 aa24.57■■□□□ 1.52
KDM6B-202ENST00000448097 HNRNPUL2Q1KMD3 747 aaKnown RBP24.56■■□□□ 1.52
KDM6B-202ENST00000448097 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.5■■□□□ 1.51
KDM6B-202ENST00000448097 YTHDC1Q96MU7 727 aaKnown RBP24.43■■□□□ 1.5
KDM6B-202ENST00000448097 NEFLP07196 543 aa24.3■■□□□ 1.48
KDM6B-202ENST00000448097 CSRNP3Q8WYN3 585 aa24.25■■□□□ 1.47
KDM6B-202ENST00000448097 RB1CC1Q8TDY2 1594 aa24.15■■□□□ 1.46
KDM6B-202ENST00000448097 FAM50AQ14320 339 aaKnown RBP24.14■■□□□ 1.46
KDM6B-202ENST00000448097 MYT1LQ9UL68 1186 aa24.13■■□□□ 1.45
KDM6B-202ENST00000448097 ERICH6Q7L0X2 663 aa24.06■■□□□ 1.44
KDM6B-202ENST00000448097 NACADO15069 1562 aa24.06■■□□□ 1.44
KDM6B-202ENST00000448097 DIEXFQ68CQ4 756 aaKnown RBP23.99■■□□□ 1.43
KDM6B-202ENST00000448097 DCAF1Q9Y4B6 1507 aa23.99■■□□□ 1.43
KDM6B-202ENST00000448097 RSF1Q96T23 1441 aaPredicted RBP23.97■■□□□ 1.43
KDM6B-202ENST00000448097 POLR3GLQ9BT43 218 aa23.97■■□□□ 1.43
KDM6B-202ENST00000448097 TRIM52Q96A61 297 aa23.88■■□□□ 1.41
KDM6B-202ENST00000448097 FBLN2P98095 1184 aa23.83■■□□□ 1.4
KDM6B-202ENST00000448097 P3H3Q8IVL6 736 aa23.81■■□□□ 1.4
KDM6B-202ENST00000448097 NEUROD1Q13562 356 aa23.79■■□□□ 1.4
KDM6B-202ENST00000448097 CNGB1Q14028 1251 aaPredicted RBP23.67■■□□□ 1.38
KDM6B-202ENST00000448097 ZNF316A6NFI3 1004 aaPredicted RBP23.65■■□□□ 1.38
KDM6B-202ENST00000448097 MYO15BQ96JP2 1530 aa23.62■■□□□ 1.37
KDM6B-202ENST00000448097 EEA1Q15075 1411 aa23.6■■□□□ 1.37
KDM6B-202ENST00000448097 BAZ1AQ9NRL2 1556 aaPredicted RBP23.6■■□□□ 1.37
KDM6B-202ENST00000448097 CDK11AQ9UQ88 783 aaPredicted RBP23.56■■□□□ 1.36
KDM6B-202ENST00000448097 BAZ1BQ9UIG0 1483 aaKnown RBP23.56■■□□□ 1.36
KDM6B-202ENST00000448097 ARID3CA6NKF2 412 aa23.55■■□□□ 1.36
KDM6B-202ENST00000448097 WRNQ14191 1432 aaPredicted RBP eCLIP23.5■■□□□ 1.35
KDM6B-202ENST00000448097 CECR2Q9BXF3 1484 aa23.5■■□□□ 1.35
KDM6B-202ENST00000448097 CLIP1P30622 1438 aa23.48■■□□□ 1.35
KDM6B-202ENST00000448097 ANP32CO43423 234 aa23.47■■□□□ 1.35
KDM6B-202ENST00000448097 ZNF326Q5BKZ1 582 aaKnown RBP23.45■■□□□ 1.34
KDM6B-202ENST00000448097 GOLGA3Q08378 1498 aa23.45■■□□□ 1.34
KDM6B-202ENST00000448097 SLC4A1APQ9BWU0 796 aaKnown RBP23.43■■□□□ 1.34
KDM6B-202ENST00000448097 ZNF777Q9ULD5 760 aaPredicted RBP23.39■■□□□ 1.34
KDM6B-202ENST00000448097 CEP162Q5TB80 1403 aa23.37■■□□□ 1.33
KDM6B-202ENST00000448097 TNIKQ9UKE5 1360 aa23.29■■□□□ 1.32
KDM6B-202ENST00000448097 DAXXQ9UER7 740 aaPredicted RBP23.27■■□□□ 1.32
KDM6B-202ENST00000448097 CEP164Q9UPV0 1460 aa23.27■■□□□ 1.32
KDM6B-202ENST00000448097 KIF27Q86VH2 1401 aa23.27■■□□□ 1.32
KDM6B-202ENST00000448097 GTF3C3Q9Y5Q9 886 aa23.26■■□□□ 1.31
KDM6B-202ENST00000448097 MROH2BQ7Z745 1585 aa23.26■■□□□ 1.31
KDM6B-202ENST00000448097 TONSLQ96HA7 1378 aa23.25■■□□□ 1.31
KDM6B-202ENST00000448097 MTUS2Q5JR59 1369 aa23.23■■□□□ 1.31
KDM6B-202ENST00000448097 CHMP7Q8WUX9 453 aaPredicted RBP23.15■■□□□ 1.3
KDM6B-202ENST00000448097 ACIN1Q9UKV3 1341 aaKnown RBP23.14■■□□□ 1.29
KDM6B-202ENST00000448097 CHIC2Q9UKJ5 165 aa23.1■■□□□ 1.29
KDM6B-202ENST00000448097 CCDC88BA6NC98 1476 aa23.1■■□□□ 1.29
KDM6B-202ENST00000448097 BCANQ96GW7 911 aa23.05■■□□□ 1.28
KDM6B-202ENST00000448097 SMARCA2P51531 1590 aa23.04■■□□□ 1.28
KDM6B-202ENST00000448097 SOGA1O94964 1423 aa23.02■■□□□ 1.27
KDM6B-202ENST00000448097 NPM1P06748 294 aaKnown RBP eCLIP23■■□□□ 1.27
KDM6B-202ENST00000448097 TSPY4P0CV99 314 aa22.99■■□□□ 1.27
KDM6B-202ENST00000448097 TSPY10P0CW01 314 aa22.99■■□□□ 1.27
KDM6B-202ENST00000448097 CLSPNQ9HAW4 1339 aa22.99■■□□□ 1.27
KDM6B-202ENST00000448097 TOP2AP11388 1531 aaKnown RBP22.97■■□□□ 1.27
KDM6B-202ENST00000448097 DDX10Q13206 875 aaKnown RBP22.95■■□□□ 1.26
KDM6B-202ENST00000448097 WIZO95785 1651 aa22.94■■□□□ 1.26
KDM6B-202ENST00000448097 ABCC8Q09428 1581 aa22.92■■□□□ 1.26
KDM6B-202ENST00000448097 CUX2O14529 1486 aa22.89■■□□□ 1.26
KDM6B-202ENST00000448097 CARMIL1Q5VZK9 1371 aa22.87■■□□□ 1.25
KDM6B-202ENST00000448097 RRP7BPQ9NSQ0 103 aa22.85■■□□□ 1.25
KDM6B-202ENST00000448097 PLEKHD1A6NEE1 506 aa22.84■■□□□ 1.25
KDM6B-202ENST00000448097 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.84■■□□□ 1.252e-6■□□□□ 8.6
KDM6B-202ENST00000448097 FHAD1B1AJZ9 1412 aa22.82■■□□□ 1.24
KDM6B-202ENST00000448097 CHGAP10645 457 aaKnown RBP22.8■■□□□ 1.24
KDM6B-202ENST00000448097 ERCC6Q03468 1493 aa22.78■■□□□ 1.24
KDM6B-202ENST00000448097 ESF1Q9H501 851 aaKnown RBP22.78■■□□□ 1.24
KDM6B-202ENST00000448097 NEFMP07197 916 aa22.77■■□□□ 1.24
KDM6B-202ENST00000448097 RTL5Q5HYW3 569 aaPredicted RBP22.77■■□□□ 1.24
KDM6B-202ENST00000448097 HNRNPUQ00839 825 aaKnown RBP eCLIP22.75■■□□□ 1.23
KDM6B-202ENST00000448097 SMARCA4P51532 1647 aa22.75■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms