RNA–Protein interactions for RNA: ENST00000308091.8

RAPH1-201, Transcript of Ras association (RalGDS/AF-6) and pleckstrin homology domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RAPH1, Length 2,768 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPH1-201ENST00000308091 NISCHQ9Y2I1 1504 aa37.7■■■■□ 3.63
RAPH1-201ENST00000308091 SHROOM4Q9ULL8 1493 aa32.69■■■□□ 2.82
RAPH1-201ENST00000308091 SUPT5HO00267 1087 aaKnown RBP32.14■■■□□ 2.74
RAPH1-201ENST00000308091 ZCCHC6Q5VYS8 1495 aaKnown RBP31.92■■■□□ 2.7
RAPH1-201ENST00000308091 CCDC180Q9P1Z9 1646 aa31.75■■■□□ 2.67
RAPH1-201ENST00000308091 DCAF8L2P0C7V8 631 aa31.58■■■□□ 2.65
RAPH1-201ENST00000308091 CHIC1Q5VXU3 224 aa31.23■■■□□ 2.59
RAPH1-201ENST00000308091 MYO15BQ96JP2 1530 aa31.23■■■□□ 2.59
RAPH1-201ENST00000308091 HRCP23327 699 aa30.94■■■□□ 2.54
RAPH1-201ENST00000308091 DCAF1Q9Y4B6 1507 aa30.75■■■□□ 2.51
RAPH1-201ENST00000308091 PPARGC1BQ86YN6 1023 aaKnown RBP30.71■■■□□ 2.51
RAPH1-201ENST00000308091 PCGF6Q9BYE7 350 aa30.63■■■□□ 2.49
RAPH1-201ENST00000308091 LOC105371045A0A1W2PR82 267 aa30.47■■■□□ 2.47
RAPH1-201ENST00000308091 ABCC9O60706 1549 aa30.15■■■□□ 2.42
RAPH1-201ENST00000308091 SCRIBQ14160 1630 aa30.1■■■□□ 2.41
RAPH1-201ENST00000308091 RSF1Q96T23 1441 aaPredicted RBP30.01■■■□□ 2.39
RAPH1-201ENST00000308091 TRIM26Q12899 539 aaPredicted RBP29.82■■■□□ 2.36
RAPH1-201ENST00000308091 TRIM41Q8WV44 630 aa29.8■■■□□ 2.36
RAPH1-201ENST00000308091 RB1CC1Q8TDY2 1594 aa29.77■■■□□ 2.36
RAPH1-201ENST00000308091 FAM9AQ8IZU1 332 aaPredicted RBP29.75■■■□□ 2.35
RAPH1-201ENST00000308091 EHMT2Q96KQ7 1210 aa29.64■■■□□ 2.34
RAPH1-201ENST00000308091 CECR2Q9BXF3 1484 aa29.55■■■□□ 2.32
RAPH1-201ENST00000308091 PELP1Q8IZL8 1130 aaKnown RBP29.54■■■□□ 2.32
RAPH1-201ENST00000308091 SCAF1Q9H7N4 1312 aaKnown RBP29.45■■■□□ 2.3
RAPH1-201ENST00000308091 MROH2BQ7Z745 1585 aa29.42■■■□□ 2.3
RAPH1-201ENST00000308091 NACADO15069 1562 aa29.37■■■□□ 2.29
RAPH1-201ENST00000308091 WIZO95785 1651 aa29.27■■■□□ 2.28
RAPH1-201ENST00000308091 ZEB1P37275 1124 aaPredicted RBP29.15■■■□□ 2.26
RAPH1-201ENST00000308091 BAZ1AQ9NRL2 1556 aaPredicted RBP28.98■■■□□ 2.23
RAPH1-201ENST00000308091 EIF4G1Q04637 1599 aaKnown RBP28.86■■■□□ 2.21
RAPH1-201ENST00000308091 ABCC8Q09428 1581 aa28.78■■■□□ 2.2
RAPH1-201ENST00000308091 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.76■■■□□ 2.19
RAPH1-201ENST00000308091 TTBK1Q5TCY1 1321 aaPredicted RBP28.72■■■□□ 2.19
RAPH1-201ENST00000308091 CCDC88BA6NC98 1476 aa28.72■■■□□ 2.19
RAPH1-201ENST00000308091 TOP2AP11388 1531 aaKnown RBP28.7■■■□□ 2.18
RAPH1-201ENST00000308091 NEUROD1Q13562 356 aa28.66■■■□□ 2.18
RAPH1-201ENST00000308091 SMARCA4P51532 1647 aa28.65■■■□□ 2.18
RAPH1-201ENST00000308091 CCER1Q8TC90 406 aaPredicted RBP28.63■■■□□ 2.17
RAPH1-201ENST00000308091 SMARCA2P51531 1590 aa28.6■■■□□ 2.17
RAPH1-201ENST00000308091 ACIN1Q9UKV3 1341 aaKnown RBP28.58■■■□□ 2.17
RAPH1-201ENST00000308091 SOGA1O94964 1423 aa28.58■■■□□ 2.16
RAPH1-201ENST00000308091 GTF3C3Q9Y5Q9 886 aa28.51■■■□□ 2.16
RAPH1-201ENST00000308091 UNC13AQ9UPW8 1703 aa28.5■■■□□ 2.15
RAPH1-201ENST00000308091 CEP162Q5TB80 1403 aa28.5■■■□□ 2.15
RAPH1-201ENST00000308091 PABPN1Q86U42 306 aaKnown RBP eCLIP28.46■■■□□ 2.15
RAPH1-201ENST00000308091 RUSC2Q8N2Y8 1516 aa28.45■■■□□ 2.14
RAPH1-201ENST00000308091 UBTFP17480 764 aaKnown RBP28.39■■■□□ 2.14
RAPH1-201ENST00000308091 WRNQ14191 1432 aaPredicted RBP eCLIP28.39■■■□□ 2.14
RAPH1-201ENST00000308091 CSRNP3Q8WYN3 585 aa28.38■■■□□ 2.13
RAPH1-201ENST00000308091 TNIKQ9UKE5 1360 aa28.35■■■□□ 2.13
RAPH1-201ENST00000308091 MYT1Q01538 1121 aa28.25■■■□□ 2.11
RAPH1-201ENST00000308091 EEA1Q15075 1411 aa28.21■■■□□ 2.11
RAPH1-201ENST00000308091 BICRAQ9NZM4 1560 aa28.17■■■□□ 2.1
RAPH1-201ENST00000308091 DIEXFQ68CQ4 756 aaKnown RBP28.17■■■□□ 2.1
RAPH1-201ENST00000308091 CENPBP07199 599 aaPredicted RBP28.16■■■□□ 2.1
RAPH1-201ENST00000308091 GOLGA3Q08378 1498 aa28.15■■■□□ 2.1
RAPH1-201ENST00000308091 YTHDC1Q96MU7 727 aaKnown RBP28.04■■■□□ 2.08
RAPH1-201ENST00000308091 SYNJ1O43426 1573 aa28.04■■■□□ 2.08
RAPH1-201ENST00000308091 HNRNPUL2Q1KMD3 747 aaKnown RBP27.98■■■□□ 2.07
RAPH1-201ENST00000308091 PEG3Q9GZU2 1588 aa27.97■■■□□ 2.07
RAPH1-201ENST00000308091 RANGAP1P46060 587 aaPredicted RBP27.97■■■□□ 2.07
RAPH1-201ENST00000308091 CEP164Q9UPV0 1460 aa27.95■■■□□ 2.06
RAPH1-201ENST00000308091 CLIP1P30622 1438 aa27.91■■■□□ 2.06
RAPH1-201ENST00000308091 ATAD2BQ9ULI0 1458 aa27.9■■■□□ 2.06
RAPH1-201ENST00000308091 BAZ1BQ9UIG0 1483 aaKnown RBP27.85■■■□□ 2.05
RAPH1-201ENST00000308091 KIF21BO75037 1637 aa27.84■■■□□ 2.05
RAPH1-201ENST00000308091 ZNF316A6NFI3 1004 aaPredicted RBP27.84■■■□□ 2.05
RAPH1-201ENST00000308091 RAPGEF2Q9Y4G8 1499 aa27.83■■■□□ 2.05
RAPH1-201ENST00000308091 VPS8Q8N3P4 1428 aa27.77■■■□□ 2.04
RAPH1-201ENST00000308091 APLP2Q06481 763 aa27.73■■■□□ 2.03
RAPH1-201ENST00000308091 MIER1Q8N108 512 aa27.59■■■□□ 2.01
RAPH1-201ENST00000308091 TOP2BQ02880 1626 aa27.57■■■□□ 2
RAPH1-201ENST00000308091 KANK4Q5T7N3 995 aaPredicted RBP27.44■■□□□ 1.98
RAPH1-201ENST00000308091 PRXQ9BXM0 1461 aa27.42■■□□□ 1.98
RAPH1-201ENST00000308091 BIVM-ERCC5R4GMW8 1640 aa27.42■■□□□ 1.98
RAPH1-201ENST00000308091 ARAP1Q96P48 1450 aa27.41■■□□□ 1.98
RAPH1-201ENST00000308091 CUX1P39880 1505 aa27.35■■□□□ 1.97
RAPH1-201ENST00000308091 ERICH3Q5RHP9 1530 aa27.34■■□□□ 1.97
RAPH1-201ENST00000308091 DHX57Q6P158 1386 aaKnown RBP27.31■■□□□ 1.96
RAPH1-201ENST00000308091 KIF27Q86VH2 1401 aa27.26■■□□□ 1.95
RAPH1-201ENST00000308091 NCAPD3P42695 1498 aa27.25■■□□□ 1.95
RAPH1-201ENST00000308091 HMGXB3Q12766 1538 aa27.2■■□□□ 1.94
RAPH1-201ENST00000308091 ITGAEP38570 1179 aa27.2■■□□□ 1.94
RAPH1-201ENST00000308091 CLSPNQ9HAW4 1339 aa27.15■■□□□ 1.94
RAPH1-201ENST00000308091 ARHGAP35Q9NRY4 1499 aa27.14■■□□□ 1.93
RAPH1-201ENST00000308091 CFTRP13569 1480 aa27.13■■□□□ 1.93
RAPH1-201ENST00000308091 RRBP1Q9P2E9 1410 aaKnown RBP27.12■■□□□ 1.93
RAPH1-201ENST00000308091 CCNB3Q8WWL7 1395 aa27.08■■□□□ 1.92
RAPH1-201ENST00000308091 SUPT16HQ9Y5B9 1047 aaKnown RBP27.03■■□□□ 1.92
RAPH1-201ENST00000308091 CUX2O14529 1486 aa27.02■■□□□ 1.92
RAPH1-201ENST00000308091 IGF1RP08069 1367 aa26.99■■□□□ 1.91
RAPH1-201ENST00000308091 BCL11AQ9H165 835 aa26.97■■□□□ 1.91
RAPH1-201ENST00000308091 TSHZ2Q9NRE2 1034 aa26.92■■□□□ 1.9
RAPH1-201ENST00000308091 RAB3GAP2Q9H2M9 1393 aa26.9■■□□□ 1.9
RAPH1-201ENST00000308091 ANP32EQ9BTT0 268 aa26.9■■□□□ 1.9
RAPH1-201ENST00000308091 CARMIL1Q5VZK9 1371 aa26.88■■□□□ 1.89
RAPH1-201ENST00000308091 P3H3Q8IVL6 736 aa26.87■■□□□ 1.89
RAPH1-201ENST00000308091 FGD5Q6ZNL6 1462 aa26.84■■□□□ 1.89
RAPH1-201ENST00000308091 TIAM1Q13009 1591 aa26.82■■□□□ 1.88
RAPH1-201ENST00000308091 CADPSQ9ULU8 1353 aa26.82■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 105.7 ms