Protein–RNA interactions for Protein: P23396

RPS3, 40S ribosomal protein S3, humanhuman

Known RBP eCLIP

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3P23396 DIDO1-202ENST00000354665 2707 ntTSL 1 (best) BASIC12.54□□□□□ -0.44e-8■■□□□ 13.9
RPS3P23396 DIDO1-205ENST00000370371 2833 ntTSL 1 (best) BASIC12.33□□□□□ -0.434e-8■■□□□ 13.9
RPS3P23396 UXS1-205ENST00000436241 502 ntTSL 411.81□□□□□ -0.524e-8■■□□□ 13.9
RPS3P23396 UXS1-204ENST00000416298 701 ntTSL 510.58□□□□□ -0.724e-8■■□□□ 13.9
RPS3P23396 UXS1-207ENST00000444193 800 ntTSL 310.55□□□□□ -0.724e-8■■□□□ 13.9
RPS3P23396 DIDO1-206ENST00000395340 7551 ntAPPRIS P3 TSL 1 (best) BASIC9.23□□□□□ -0.934e-8■■□□□ 13.9
RPS3P23396 TBRG4-210ENST00000482285 530 ntTSL 49.19□□□□□ -0.944e-8■■□□□ 13.9
RPS3P23396 SF3B2-204ENST00000525207 493 ntTSL 29.11□□□□□ -0.954e-8■■□□□ 13.9
RPS3P23396 EIF3L-213ENST00000482600 1294 ntTSL 58.87□□□□□ -0.994e-8■■□□□ 13.9
RPS3P23396 MKI67-202ENST00000368654 12678 ntAPPRIS P3 TSL 2 BASIC8.75□□□□□ -1.014e-8■■□□□ 13.9
RPS3P23396 TBRG4-206ENST00000475893 579 ntTSL 48.39□□□□□ -1.074e-8■■□□□ 13.9
RPS3P23396 IPO9-201ENST00000361565 11435 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.184e-8■■□□□ 13.9
RPS3P23396 HERPUD1-207ENST00000563781 774 ntTSL 35.09□□□□□ -1.599e-7■■□□□ 13.9
RPS3P23396 ATP1B3-210ENST00000495216 418 ntTSL 31.89□□□□□ -2.114e-8■■□□□ 13.9
RPS3P23396 UBR4-205ENST00000417040 6175 ntTSL 511.8□□□□□ -0.526e-8■■□□□ 13.9
RPS3P23396 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.873e-8■■□□□ 13.9
RPS3P23396 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC19.8■□□□□ 0.763e-8■■□□□ 13.9
RPS3P23396 GDE1-203ENST00000564172 2238 ntTSL 1 (best)17.43■□□□□ 0.387e-13■■□□□ 13.9
RPS3P23396 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC16.93■□□□□ 0.35e-8■■□□□ 13.9
RPS3P23396 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.187e-13■■□□□ 13.9
RPS3P23396 TUBB3-213ENST00000557262 888 ntTSL 1 (best)15.24■□□□□ 0.035e-8■■□□□ 13.9
RPS3P23396 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC15.13■□□□□ 0.015e-8■■□□□ 13.9
RPS3P23396 TUBB3-215ENST00000625617 570 ntTSL 4 BASIC13.81□□□□□ -0.25e-8■■□□□ 13.9
RPS3P23396 PLXNB2-210ENST00000479818 1916 ntTSL 1 (best)17.29■□□□□ 0.363e-7■■□□□ 13.9
RPS3P23396 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC22.53■■□□□ 1.23e-7■■□□□ 13.9
RPS3P23396 TRAP1-201ENST00000246957 2296 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.363e-7■■□□□ 13.9
RPS3P23396 ITIH2-202ENST00000379587 2848 ntTSL 5 BASIC9.73□□□□□ -0.854e-33■■□□□ 13.9
RPS3P23396 ITIH2-201ENST00000358415 3193 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.984e-33■■□□□ 13.9
RPS3P23396 JUP-204ENST00000420370 915 ntTSL 318.66■□□□□ 0.582e-6■■□□□ 13.9
RPS3P23396 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.129e-8■■□□□ 13.9
RPS3P23396 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC15.57■□□□□ 0.089e-8■■□□□ 13.9
RPS3P23396 FDPS-221ENST00000612683 1198 ntAPPRIS ALT1 TSL 5 BASIC14.13□□□□□ -0.159e-8■■□□□ 13.9
RPS3P23396 FDPS-206ENST00000467076 1178 ntAPPRIS ALT1 TSL 3 BASIC12.24□□□□□ -0.459e-8■■□□□ 13.9
RPS3P23396 FDPS-220ENST00000611010 1196 ntTSL 5 BASIC11.1□□□□□ -0.639e-8■■□□□ 13.9
RPS3P23396 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC17.25■□□□□ 0.359e-17■■□□□ 13.9
RPS3P23396 WARS-220ENST00000554950 1376 ntTSL 29.46□□□□□ -0.96e-7■■□□□ 13.9
RPS3P23396 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.874e-8■■□□□ 13.9
RPS3P23396 CD7-203ENST00000581434 572 ntTSL 319.7■□□□□ 0.744e-8■■□□□ 13.9
RPS3P23396 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC18.77■□□□□ 0.64e-8■■□□□ 13.9
RPS3P23396 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.484e-8■■□□□ 13.9
RPS3P23396 CD7-204ENST00000581744 990 ntTSL 217.44■□□□□ 0.384e-8■■□□□ 13.9
RPS3P23396 CD7-202ENST00000578509 925 ntTSL 3 BASIC16.36■□□□□ 0.214e-8■■□□□ 13.9
RPS3P23396 EIF3M-211ENST00000532054 532 ntTSL 216.86■□□□□ 0.293e-16■■□□□ 13.8
RPS3P23396 WARS-242ENST00000557614 499 ntTSL 28.23□□□□□ -1.094e-8■■□□□ 13.8
RPS3P23396 CTNND1-238ENST00000534647 866 ntTSL 510.99□□□□□ -0.654e-9■■□□□ 13.8
RPS3P23396 CTNND1-235ENST00000533189 498 ntTSL 310.02□□□□□ -0.814e-9■■□□□ 13.8
RPS3P23396 AGRN-201ENST00000379370 7323 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.262e-7■■□□□ 13.8
RPS3P23396 AGRN-210ENST00000620552 7394 ntTSL 5 BASIC13.32□□□□□ -0.282e-7■■□□□ 13.8
RPS3P23396 CD46-214ENST00000480003 1258 ntAPPRIS ALT2 TSL 5 BASIC9.47□□□□□ -0.891e-9■■□□□ 13.8
RPS3P23396 CD46-202ENST00000322918 3124 ntAPPRIS ALT2 TSL 1 (best) BASIC8.91□□□□□ -0.981e-9■■□□□ 13.8
RPS3P23396 CD46-206ENST00000360212 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC8.43□□□□□ -1.061e-9■■□□□ 13.8
RPS3P23396 CD46-209ENST00000367047 3089 ntTSL 5 BASIC8.33□□□□□ -1.081e-9■■□□□ 13.8
RPS3P23396 CD46-205ENST00000358170 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC8.01□□□□□ -1.131e-9■■□□□ 13.8
RPS3P23396 CD46-208ENST00000367042 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC7.86□□□□□ -1.151e-9■■□□□ 13.8
RPS3P23396 CD46-203ENST00000354848 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC7.65□□□□□ -1.181e-9■■□□□ 13.8
RPS3P23396 CD46-201ENST00000322875 3278 ntAPPRIS P4 TSL 1 (best) BASIC7.51□□□□□ -1.211e-9■■□□□ 13.8
RPS3P23396 CD46-207ENST00000367041 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC7.51□□□□□ -1.211e-9■■□□□ 13.8
RPS3P23396 CD46-204ENST00000357714 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC7.38□□□□□ -1.231e-9■■□□□ 13.8
RPS3P23396 CD46-212ENST00000469535 7826 ntTSL 1 (best)6.63□□□□□ -1.351e-9■■□□□ 13.8
RPS3P23396 PRKCSH-220ENST00000593104 545 ntTSL 410.6□□□□□ -0.718e-8■■□□□ 13.8
RPS3P23396 NACA-209ENST00000548084 542 ntTSL 312.09□□□□□ -0.474e-21■■□□□ 13.8
RPS3P23396 NACA-213ENST00000549855 711 ntTSL 58.84□□□□□ -0.994e-21■■□□□ 13.8
RPS3P23396 NACA-219ENST00000551793 768 ntTSL 26.27□□□□□ -1.414e-21■■□□□ 13.8
RPS3P23396 NACA-217ENST00000551520 544 ntTSL 24.77□□□□□ -1.654e-21■■□□□ 13.8
RPS3P23396 COL9A3-205ENST00000466192 2194 ntTSL 218.07■□□□□ 0.481e-14■■□□□ 13.8
RPS3P23396 ADAM10-202ENST00000396136 2418 ntTSL 1 (best)3.27□□□□□ -1.892e-9■■□□□ 13.8
RPS3P23396 AARS-207ENST00000569825 871 ntTSL 216.91■□□□□ 0.32e-9■■□□□ 13.8
RPS3P23396 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.337e-7■■□□□ 13.8
RPS3P23396 DPF2-202ENST00000415073 2085 ntTSL 2 BASIC13.11□□□□□ -0.317e-7■■□□□ 13.8
RPS3P23396 DPF2-207ENST00000530993 624 ntTSL 510.76□□□□□ -0.697e-7■■□□□ 13.8
RPS3P23396 DPF2-201ENST00000252268 2462 ntTSL 5 BASIC10.22□□□□□ -0.777e-7■■□□□ 13.8
RPS3P23396 DPF2-210ENST00000532102 524 ntTSL 49.53□□□□□ -0.887e-7■■□□□ 13.8
RPS3P23396 DPF2-204ENST00000524666 4840 ntTSL 28.31□□□□□ -1.087e-7■■□□□ 13.8
RPS3P23396 DPF2-211ENST00000532264 726 ntTSL 56.97□□□□□ -1.297e-7■■□□□ 13.8
RPS3P23396 EEF1D-251ENST00000534232 817 ntTSL 514.81□□□□□ -0.049e-7■■□□□ 13.8
RPS3P23396 EEF1D-232ENST00000530445 1217 ntTSL 214.09□□□□□ -0.159e-7■■□□□ 13.8
RPS3P23396 EEF1D-248ENST00000533494 758 ntTSL 512.64□□□□□ -0.399e-7■■□□□ 13.8
RPS3P23396 EEF1D-226ENST00000529516 473 ntTSL 38.56□□□□□ -1.049e-7■■□□□ 13.8
RPS3P23396 FBLN1-206ENST00000437711 753 ntTSL 514.83□□□□□ -0.042e-8■■□□□ 13.8
RPS3P23396 A2M-203ENST00000462568 546 ntTSL 23.6□□□□□ -1.832e-65■■□□□ 13.8
RPS3P23396 MGAT1-207ENST00000504385 540 ntTSL 410.64□□□□□ -0.712e-15■■□□□ 13.8
RPS3P23396 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC19.54■□□□□ 0.728e-9■■□□□ 13.8
RPS3P23396 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC18.8■□□□□ 0.68e-9■■□□□ 13.8
RPS3P23396 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.118e-9■■□□□ 13.8
RPS3P23396 FBLN1-208ENST00000442170 2531 ntTSL 1 (best) BASIC13.27□□□□□ -0.298e-9■■□□□ 13.8
RPS3P23396 DDX5-210ENST00000578804 2021 ntTSL 1 (best) BASIC12.92□□□□□ -0.343e-14■■□□□ 13.8
RPS3P23396 LBR-205ENST00000425080 874 ntTSL 39.11□□□□□ -0.952e-6■■□□□ 13.8
RPS3P23396 DPYSL2-202ENST00000474808 566 ntTSL 37.26□□□□□ -1.254e-16■■□□□ 13.8
RPS3P23396 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.14e-8■■□□□ 13.8
RPS3P23396 MCL1-204ENST00000620947 3626 ntTSL 1 (best) BASIC12.73□□□□□ -0.374e-8■■□□□ 13.8
RPS3P23396 GTPBP1-201ENST00000216044 5126 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.172e-6■■□□□ 13.8
RPS3P23396 NORAD-201ENST00000565493 5339 ntBASIC15.12■□□□□ 0.012e-12■■□□□ 13.8
RPS3P23396 KIAA1161-201ENST00000297625 6398 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.279e-7■■□□□ 13.8
RPS3P23396 FN1-216ENST00000469569 629 ntTSL 28.93□□□□□ -0.981e-323■■□□□ 13.8
RPS3P23396 HNRNPC-228ENST00000557033 760 ntTSL 39.44□□□□□ -0.94e-17■■□□□ 13.8
RPS3P23396 HNRNPC-215ENST00000555127 929 ntTSL 26.43□□□□□ -1.384e-17■■□□□ 13.8
RPS3P23396 NDUFA13-205ENST00000511180 593 ntTSL 214.83□□□□□ -0.042e-9■■□□□ 13.8
RPS3P23396 LRRC59-203ENST00000576448 1531 ntBASIC14.96□□□□□ -0.029e-8■■□□□ 13.8
RPS3P23396 NACA-215ENST00000550920 752 ntTSL 59.65□□□□□ -0.862e-18■■□□□ 13.8
RPS3P23396 KARS-201ENST00000302445 2005 ntTSL 1 (best) BASIC13.39□□□□□ -0.271e-6■■□□□ 13.8
Retrieved 100 of 24,271 protein–RNA pairs in 179.2 ms