RNA–Protein interactions for RNA: ENST00000557262.5

TUBB3-213, Transcript of tubulin beta 3 class III, humanhuman

TSL 1 (best)

Gene TUBB3, Length 888 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-213ENST00000557262 NISCHQ9Y2I1 1504 aa39.54■■■■□ 3.92
TUBB3-213ENST00000557262 CCDC180Q9P1Z9 1646 aa35.36■■■■□ 3.25
TUBB3-213ENST00000557262 ABCC9O60706 1549 aa35.34■■■■□ 3.25
TUBB3-213ENST00000557262 RB1CC1Q8TDY2 1594 aa33.66■■■□□ 2.98
TUBB3-213ENST00000557262 NACADO15069 1562 aa33.47■■■□□ 2.95
TUBB3-213ENST00000557262 DCAF8L2P0C7V8 631 aa33.45■■■□□ 2.95
TUBB3-213ENST00000557262 DNAJC5BQ9UF47 199 aa33.13■■■□□ 2.89
TUBB3-213ENST00000557262 MYO15BQ96JP2 1530 aa33.05■■■□□ 2.88
TUBB3-213ENST00000557262 PABPN1Q86U42 306 aaKnown RBP eCLIP32.98■■■□□ 2.87
TUBB3-213ENST00000557262 UNC13AQ9UPW8 1703 aa32.86■■■□□ 2.85
TUBB3-213ENST00000557262 ZCCHC6Q5VYS8 1495 aaKnown RBP32.75■■■□□ 2.83
TUBB3-213ENST00000557262 BICRAQ9NZM4 1560 aa32.66■■■□□ 2.82
TUBB3-213ENST00000557262 DCAF1Q9Y4B6 1507 aa32.66■■■□□ 2.82
TUBB3-213ENST00000557262 SCRIBQ14160 1630 aa32.24■■■□□ 2.75
TUBB3-213ENST00000557262 SHROOM4Q9ULL8 1493 aa32.23■■■□□ 2.75
TUBB3-213ENST00000557262 CC2D2AQ9P2K1 1620 aa31.92■■■□□ 2.7
TUBB3-213ENST00000557262 EIF4G1Q04637 1599 aaKnown RBP31.86■■■□□ 2.69
TUBB3-213ENST00000557262 CECR2Q9BXF3 1484 aa31.83■■■□□ 2.69
TUBB3-213ENST00000557262 NCAPD3P42695 1498 aa30.94■■■□□ 2.54
TUBB3-213ENST00000557262 ATAD2BQ9ULI0 1458 aa30.83■■■□□ 2.53
TUBB3-213ENST00000557262 SMARCA4P51532 1647 aa30.77■■■□□ 2.52
TUBB3-213ENST00000557262 SMARCA2P51531 1590 aa30.73■■■□□ 2.51
TUBB3-213ENST00000557262 BAZ1AQ9NRL2 1556 aaPredicted RBP30.66■■■□□ 2.5
TUBB3-213ENST00000557262 HMGXB3Q12766 1538 aa30.65■■■□□ 2.5
TUBB3-213ENST00000557262 BAZ1BQ9UIG0 1483 aaKnown RBP30.52■■■□□ 2.48
TUBB3-213ENST00000557262 ERCC6Q03468 1493 aa30.51■■■□□ 2.48
TUBB3-213ENST00000557262 PEG3Q9GZU2 1588 aa30.49■■■□□ 2.47
TUBB3-213ENST00000557262 MROH2BQ7Z745 1585 aa30.45■■■□□ 2.47
TUBB3-213ENST00000557262 CUX2O14529 1486 aa30.43■■■□□ 2.46
TUBB3-213ENST00000557262 NESP48681 1621 aa30.37■■■□□ 2.45
TUBB3-213ENST00000557262 DNAJC5Q9H3Z4 198 aa30.37■■■□□ 2.45
TUBB3-213ENST00000557262 LAMC3Q9Y6N6 1575 aa30.17■■■□□ 2.42
TUBB3-213ENST00000557262 WIZO95785 1651 aa30.07■■■□□ 2.4
TUBB3-213ENST00000557262 PDS5BQ9NTI5 1447 aa30.05■■■□□ 2.4
TUBB3-213ENST00000557262 THOC2Q8NI27 1593 aaKnown RBP30.03■■■□□ 2.4
TUBB3-213ENST00000557262 CADPSQ9ULU8 1353 aa30.02■■■□□ 2.4
TUBB3-213ENST00000557262 KIF21AQ7Z4S6 1674 aa29.96■■■□□ 2.39
TUBB3-213ENST00000557262 RSF1Q96T23 1441 aaPredicted RBP29.89■■■□□ 2.38
TUBB3-213ENST00000557262 MRC2Q9UBG0 1479 aa29.74■■■□□ 2.35
TUBB3-213ENST00000557262 TOP2AP11388 1531 aaKnown RBP29.7■■■□□ 2.34
TUBB3-213ENST00000557262 CFTRP13569 1480 aa29.67■■■□□ 2.34
TUBB3-213ENST00000557262 WDR62O43379 1518 aa29.65■■■□□ 2.34
TUBB3-213ENST00000557262 CEP164Q9UPV0 1460 aa29.64■■■□□ 2.34
TUBB3-213ENST00000557262 FANCD2Q9BXW9 1451 aa29.63■■■□□ 2.33
TUBB3-213ENST00000557262 CCDC88BA6NC98 1476 aa29.42■■■□□ 2.3
TUBB3-213ENST00000557262 URB2Q14146 1524 aaKnown RBP29.36■■■□□ 2.29
TUBB3-213ENST00000557262 PRDM2Q13029 1718 aa29.28■■■□□ 2.28
TUBB3-213ENST00000557262 OSCARQ8IYS5 282 aa29.15■■■□□ 2.26
TUBB3-213ENST00000557262 TRIM41Q8WV44 630 aa29.07■■■□□ 2.24
TUBB3-213ENST00000557262 TOPBP1Q92547 1522 aa29.07■■■□□ 2.24
TUBB3-213ENST00000557262 ABCC8Q09428 1581 aa29.06■■■□□ 2.24
TUBB3-213ENST00000557262 IFT140Q96RY7 1462 aa29.06■■■□□ 2.24
TUBB3-213ENST00000557262 ZNF608Q9ULD9 1512 aaPredicted RBP28.99■■■□□ 2.23
TUBB3-213ENST00000557262 DNMBPQ6XZF7 1577 aa28.95■■■□□ 2.22
TUBB3-213ENST00000557262 EIF4G3O43432 1585 aaKnown RBP28.8■■■□□ 2.2
TUBB3-213ENST00000557262 AQRO60306 1485 aaKnown RBP eCLIP28.78■■■□□ 2.2
TUBB3-213ENST00000557262 POLA1P09884 1462 aaPredicted RBP28.78■■■□□ 2.2
TUBB3-213ENST00000557262 TARBP1Q13395 1621 aaKnown RBP28.77■■■□□ 2.2
TUBB3-213ENST00000557262 SOGA1O94964 1423 aa28.72■■■□□ 2.19
TUBB3-213ENST00000557262 SUPT5HO00267 1087 aaKnown RBP28.72■■■□□ 2.19
TUBB3-213ENST00000557262 RAD54L2Q9Y4B4 1467 aa28.69■■■□□ 2.18
TUBB3-213ENST00000557262 RIMBP3CA6NJZ7 1639 aa28.65■■■□□ 2.18
TUBB3-213ENST00000557262 RIMBP3BA6NNM3 1639 aa28.65■■■□□ 2.18
TUBB3-213ENST00000557262 RIMBP3Q9UFD9 1639 aa28.65■■■□□ 2.18
TUBB3-213ENST00000557262 TDRD9Q8NDG6 1382 aaKnown RBP28.64■■■□□ 2.18
TUBB3-213ENST00000557262 FBLN2P98095 1184 aa28.63■■■□□ 2.17
TUBB3-213ENST00000557262 FGD5Q6ZNL6 1462 aa28.61■■■□□ 2.17
TUBB3-213ENST00000557262 CUX1P39880 1505 aa28.59■■■□□ 2.17
TUBB3-213ENST00000557262 ARHGEF11O15085 1522 aa28.58■■■□□ 2.17
TUBB3-213ENST00000557262 CHD1O14646 1710 aa28.57■■■□□ 2.16
TUBB3-213ENST00000557262 WDR97A6NE52 1622 aa28.49■■■□□ 2.15
TUBB3-213ENST00000557262 CYB5RLQ6IPT4 315 aa28.45■■■□□ 2.14
TUBB3-213ENST00000557262 CHMP7Q8WUX9 453 aaPredicted RBP28.44■■■□□ 2.14
TUBB3-213ENST00000557262 SNAPC4Q5SXM2 1469 aa28.44■■■□□ 2.14
TUBB3-213ENST00000557262 GRIN2BQ13224 1484 aa28.41■■■□□ 2.14
TUBB3-213ENST00000557262 MAGI1Q96QZ7 1491 aaPredicted RBP28.39■■■□□ 2.13
TUBB3-213ENST00000557262 GAPVD1Q14C86 1478 aa28.33■■■□□ 2.13
TUBB3-213ENST00000557262 ABCA10Q8WWZ4 1543 aa28.31■■■□□ 2.12
TUBB3-213ENST00000557262 SYNJ2O15056 1496 aa28.3■■■□□ 2.12
TUBB3-213ENST00000557262 ARAP1Q96P48 1450 aa28.3■■■□□ 2.12
TUBB3-213ENST00000557262 CLASP1Q7Z460 1538 aa28.27■■■□□ 2.12
TUBB3-213ENST00000557262 SYNJ1O43426 1573 aa28.26■■■□□ 2.11
TUBB3-213ENST00000557262 WRNQ14191 1432 aaPredicted RBP eCLIP28.26■■■□□ 2.11
TUBB3-213ENST00000557262 PBRM1Q86U86 1689 aa28.24■■■□□ 2.11
TUBB3-213ENST00000557262 ABCA5Q8WWZ7 1642 aa28.2■■■□□ 2.1
TUBB3-213ENST00000557262 TOP2BQ02880 1626 aa28.16■■■□□ 2.1
TUBB3-213ENST00000557262 BIVM-ERCC5R4GMW8 1640 aa28.13■■■□□ 2.09
TUBB3-213ENST00000557262 TRHP20396 242 aaPredicted RBP28.1■■■□□ 2.09
TUBB3-213ENST00000557262 GRIN2AQ12879 1464 aa28.02■■■□□ 2.08
TUBB3-213ENST00000557262 FHAD1B1AJZ9 1412 aa27.99■■■□□ 2.07
TUBB3-213ENST00000557262 ADAMTS12P58397 1594 aa27.99■■■□□ 2.07
TUBB3-213ENST00000557262 ERICH3Q5RHP9 1530 aa27.95■■■□□ 2.06
TUBB3-213ENST00000557262 NUP160Q12769 1436 aa27.94■■■□□ 2.06
TUBB3-213ENST00000557262 CEP170Q5SW79 1584 aa27.9■■■□□ 2.06
TUBB3-213ENST00000557262 ERCC6L2Q5T890 1561 aa27.83■■■□□ 2.05
TUBB3-213ENST00000557262 SHROOM2Q13796 1616 aa27.77■■■□□ 2.04
TUBB3-213ENST00000557262 JPH4Q96JJ6 628 aa27.76■■■□□ 2.03
TUBB3-213ENST00000557262 PRG4Q92954 1404 aaPredicted RBP27.7■■■□□ 2.03
TUBB3-213ENST00000557262 IGF1RP08069 1367 aa27.69■■■□□ 2.02
TUBB3-213ENST00000557262 KIF27Q86VH2 1401 aa27.67■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 206.3 ms