RNA–Protein interactions for RNA: ENST00000368356.8

FDPS-202, Transcript of farnesyl diphosphate synthase, humanhuman

APPRIS P3 TSL 2 BASIC

Gene FDPS, Length 1,431 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-202ENST00000368356 NISCHQ9Y2I1 1504 aa37.11■■■■□ 3.53
FDPS-202ENST00000368356 CCDC180Q9P1Z9 1646 aa33.08■■■□□ 2.89
FDPS-202ENST00000368356 ABCC9O60706 1549 aa32.23■■■□□ 2.75
FDPS-202ENST00000368356 RB1CC1Q8TDY2 1594 aa31.09■■■□□ 2.57
FDPS-202ENST00000368356 NACADO15069 1562 aa31.05■■■□□ 2.56
FDPS-202ENST00000368356 ZCCHC6Q5VYS8 1495 aaKnown RBP30.94■■■□□ 2.54
FDPS-202ENST00000368356 DCAF8L2P0C7V8 631 aa30.9■■■□□ 2.54
FDPS-202ENST00000368356 MYO15BQ96JP2 1530 aa30.89■■■□□ 2.54
FDPS-202ENST00000368356 DCAF1Q9Y4B6 1507 aa30.75■■■□□ 2.51
FDPS-202ENST00000368356 UNC13AQ9UPW8 1703 aa30.39■■■□□ 2.46
FDPS-202ENST00000368356 SCRIBQ14160 1630 aa30.11■■■□□ 2.41
FDPS-202ENST00000368356 BICRAQ9NZM4 1560 aa30.1■■■□□ 2.41
FDPS-202ENST00000368356 PABPN1Q86U42 306 aaKnown RBP eCLIP30.05■■■□□ 2.42e-8■□□□□ 9.5
FDPS-202ENST00000368356 SHROOM4Q9ULL8 1493 aa29.88■■■□□ 2.37
FDPS-202ENST00000368356 DNAJC5BQ9UF47 199 aa29.47■■■□□ 2.31
FDPS-202ENST00000368356 EIF4G1Q04637 1599 aaKnown RBP29.33■■■□□ 2.29
FDPS-202ENST00000368356 CC2D2AQ9P2K1 1620 aa29.2■■■□□ 2.27
FDPS-202ENST00000368356 CECR2Q9BXF3 1484 aa28.98■■■□□ 2.23
FDPS-202ENST00000368356 SMARCA4P51532 1647 aa28.83■■■□□ 2.2
FDPS-202ENST00000368356 BAZ1AQ9NRL2 1556 aaPredicted RBP28.81■■■□□ 2.2
FDPS-202ENST00000368356 SMARCA2P51531 1590 aa28.65■■■□□ 2.18
FDPS-202ENST00000368356 ATAD2BQ9ULI0 1458 aa28.62■■■□□ 2.17
FDPS-202ENST00000368356 NCAPD3P42695 1498 aa28.61■■■□□ 2.17
FDPS-202ENST00000368356 MROH2BQ7Z745 1585 aa28.57■■■□□ 2.16
FDPS-202ENST00000368356 PEG3Q9GZU2 1588 aa28.56■■■□□ 2.16
FDPS-202ENST00000368356 HMGXB3Q12766 1538 aa28.53■■■□□ 2.16
FDPS-202ENST00000368356 BAZ1BQ9UIG0 1483 aaKnown RBP28.42■■■□□ 2.14
FDPS-202ENST00000368356 RSF1Q96T23 1441 aaPredicted RBP28.4■■■□□ 2.14
FDPS-202ENST00000368356 WIZO95785 1651 aa28.29■■■□□ 2.12
FDPS-202ENST00000368356 SUPT5HO00267 1087 aaKnown RBP28.15■■■□□ 2.1
FDPS-202ENST00000368356 TOP2AP11388 1531 aaKnown RBP28.02■■■□□ 2.08
FDPS-202ENST00000368356 LAMC3Q9Y6N6 1575 aa27.91■■■□□ 2.06
FDPS-202ENST00000368356 NESP48681 1621 aa27.88■■■□□ 2.05
FDPS-202ENST00000368356 ERCC6Q03468 1493 aa27.82■■■□□ 2.04
FDPS-202ENST00000368356 CADPSQ9ULU8 1353 aa27.76■■■□□ 2.03
FDPS-202ENST00000368356 PDS5BQ9NTI5 1447 aa27.68■■■□□ 2.02
FDPS-202ENST00000368356 CCDC88BA6NC98 1476 aa27.63■■■□□ 2.01
FDPS-202ENST00000368356 KIF21AQ7Z4S6 1674 aa27.63■■■□□ 2.01
FDPS-202ENST00000368356 CFTRP13569 1480 aa27.62■■■□□ 2.01
FDPS-202ENST00000368356 CUX2O14529 1486 aa27.55■■■□□ 2
FDPS-202ENST00000368356 THOC2Q8NI27 1593 aaKnown RBP27.55■■■□□ 2
FDPS-202ENST00000368356 PRDM2Q13029 1718 aa27.52■■■□□ 2
FDPS-202ENST00000368356 FANCD2Q9BXW9 1451 aa27.46■■□□□ 1.99
FDPS-202ENST00000368356 CEP164Q9UPV0 1460 aa27.46■■□□□ 1.99
FDPS-202ENST00000368356 MRC2Q9UBG0 1479 aa27.41■■□□□ 1.98
FDPS-202ENST00000368356 WDR62O43379 1518 aa27.33■■□□□ 1.97
FDPS-202ENST00000368356 URB2Q14146 1524 aaKnown RBP27.18■■□□□ 1.94
FDPS-202ENST00000368356 ABCC8Q09428 1581 aa27.06■■□□□ 1.92
FDPS-202ENST00000368356 DNMBPQ6XZF7 1577 aa27.04■■□□□ 1.92
FDPS-202ENST00000368356 TOPBP1Q92547 1522 aa27.03■■□□□ 1.92
FDPS-202ENST00000368356 IFT140Q96RY7 1462 aa26.87■■□□□ 1.89
FDPS-202ENST00000368356 CUX1P39880 1505 aa26.82■■□□□ 1.88
FDPS-202ENST00000368356 POLA1P09884 1462 aaPredicted RBP26.8■■□□□ 1.88
FDPS-202ENST00000368356 TARBP1Q13395 1621 aaKnown RBP26.75■■□□□ 1.87
FDPS-202ENST00000368356 WRNQ14191 1432 aaPredicted RBP eCLIP26.74■■□□□ 1.87
FDPS-202ENST00000368356 FGD5Q6ZNL6 1462 aa26.74■■□□□ 1.87
FDPS-202ENST00000368356 CHIC1Q5VXU3 224 aa26.73■■□□□ 1.87
FDPS-202ENST00000368356 ZNF608Q9ULD9 1512 aaPredicted RBP26.7■■□□□ 1.86
FDPS-202ENST00000368356 EIF4G3O43432 1585 aaKnown RBP26.67■■□□□ 1.86
FDPS-202ENST00000368356 SOGA1O94964 1423 aa26.67■■□□□ 1.86
FDPS-202ENST00000368356 BIVM-ERCC5R4GMW8 1640 aa26.66■■□□□ 1.86
FDPS-202ENST00000368356 SYNJ1O43426 1573 aa26.65■■□□□ 1.86
FDPS-202ENST00000368356 RAD54L2Q9Y4B4 1467 aa26.64■■□□□ 1.86
FDPS-202ENST00000368356 TOP2BQ02880 1626 aa26.64■■□□□ 1.86
FDPS-202ENST00000368356 WDR97A6NE52 1622 aa26.61■■□□□ 1.85
FDPS-202ENST00000368356 TRIM41Q8WV44 630 aa26.58■■□□□ 1.85
FDPS-202ENST00000368356 DNAJC5Q9H3Z4 198 aa26.58■■□□□ 1.85
FDPS-202ENST00000368356 AQRO60306 1485 aaKnown RBP eCLIP26.54■■□□□ 1.842e-7■■■■□ 26.3
FDPS-202ENST00000368356 ABCA10Q8WWZ4 1543 aa26.5■■□□□ 1.83
FDPS-202ENST00000368356 TDRD9Q8NDG6 1382 aaKnown RBP26.48■■□□□ 1.83
FDPS-202ENST00000368356 ABCA5Q8WWZ7 1642 aa26.41■■□□□ 1.82
FDPS-202ENST00000368356 PBRM1Q86U86 1689 aa26.39■■□□□ 1.82
FDPS-202ENST00000368356 GRIN2BQ13224 1484 aa26.39■■□□□ 1.81
FDPS-202ENST00000368356 GAPVD1Q14C86 1478 aa26.38■■□□□ 1.81
FDPS-202ENST00000368356 SNAPC4Q5SXM2 1469 aa26.34■■□□□ 1.81
FDPS-202ENST00000368356 MAGI1Q96QZ7 1491 aaPredicted RBP26.34■■□□□ 1.81
FDPS-202ENST00000368356 CHD1O14646 1710 aa26.33■■□□□ 1.81
FDPS-202ENST00000368356 OSCARQ8IYS5 282 aa26.33■■□□□ 1.81
FDPS-202ENST00000368356 SYNJ2O15056 1496 aa26.22■■□□□ 1.79
FDPS-202ENST00000368356 FBLN2P98095 1184 aa26.2■■□□□ 1.78
FDPS-202ENST00000368356 ERICH3Q5RHP9 1530 aa26.2■■□□□ 1.78
FDPS-202ENST00000368356 ADAMTS12P58397 1594 aa26.16■■□□□ 1.78
FDPS-202ENST00000368356 CHMP7Q8WUX9 453 aaPredicted RBP26.15■■□□□ 1.78
FDPS-202ENST00000368356 EEA1Q15075 1411 aa26.12■■□□□ 1.77
FDPS-202ENST00000368356 KIF27Q86VH2 1401 aa26.12■■□□□ 1.77
FDPS-202ENST00000368356 RUSC2Q8N2Y8 1516 aa26.11■■□□□ 1.77
FDPS-202ENST00000368356 FHAD1B1AJZ9 1412 aa26.08■■□□□ 1.77
FDPS-202ENST00000368356 GRIN2AQ12879 1464 aa26.05■■□□□ 1.76
FDPS-202ENST00000368356 CLASP1Q7Z460 1538 aa26.03■■□□□ 1.76
FDPS-202ENST00000368356 CUL7Q14999 1698 aa26■■□□□ 1.75
FDPS-202ENST00000368356 FAM9AQ8IZU1 332 aaPredicted RBP25.97■■□□□ 1.75
FDPS-202ENST00000368356 RIMBP3CA6NJZ7 1639 aa25.97■■□□□ 1.75
FDPS-202ENST00000368356 RIMBP3BA6NNM3 1639 aa25.97■■□□□ 1.75
FDPS-202ENST00000368356 RIMBP3Q9UFD9 1639 aa25.97■■□□□ 1.75
FDPS-202ENST00000368356 CSRNP3Q8WYN3 585 aa25.97■■□□□ 1.75
FDPS-202ENST00000368356 ARHGEF11O15085 1522 aa25.96■■□□□ 1.75
FDPS-202ENST00000368356 IGF1RP08069 1367 aa25.94■■□□□ 1.74
FDPS-202ENST00000368356 NUP160Q12769 1436 aa25.93■■□□□ 1.74
FDPS-202ENST00000368356 CEP170Q5SW79 1584 aa25.92■■□□□ 1.74
FDPS-202ENST00000368356 PRXQ9BXM0 1461 aa25.82■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms