RNA–Protein interactions for RNA: ENST00000467076.5

FDPS-206, Transcript of farnesyl diphosphate synthase, humanhuman

APPRIS ALT1 TSL 3 BASIC

Gene FDPS, Length 1,178 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-206ENST00000467076 NISCHQ9Y2I1 1504 aa30.87■■■□□ 2.53
FDPS-206ENST00000467076 CCDC180Q9P1Z9 1646 aa27.59■■■□□ 2.01
FDPS-206ENST00000467076 ABCC9O60706 1549 aa27.05■■□□□ 1.92
FDPS-206ENST00000467076 RB1CC1Q8TDY2 1594 aa25.98■■□□□ 1.75
FDPS-206ENST00000467076 NACADO15069 1562 aa25.88■■□□□ 1.73
FDPS-206ENST00000467076 DCAF8L2P0C7V8 631 aa25.81■■□□□ 1.72
FDPS-206ENST00000467076 ZCCHC6Q5VYS8 1495 aaKnown RBP25.72■■□□□ 1.71
FDPS-206ENST00000467076 MYO15BQ96JP2 1530 aa25.63■■□□□ 1.69
FDPS-206ENST00000467076 UNC13AQ9UPW8 1703 aa25.57■■□□□ 1.68
FDPS-206ENST00000467076 DCAF1Q9Y4B6 1507 aa25.51■■□□□ 1.67
FDPS-206ENST00000467076 BICRAQ9NZM4 1560 aa25.2■■□□□ 1.62
FDPS-206ENST00000467076 SCRIBQ14160 1630 aa25.19■■□□□ 1.62
FDPS-206ENST00000467076 PABPN1Q86U42 306 aaKnown RBP eCLIP25.19■■□□□ 1.622e-8■□□□□ 9.5
FDPS-206ENST00000467076 SHROOM4Q9ULL8 1493 aa24.84■■□□□ 1.57
FDPS-206ENST00000467076 DNAJC5BQ9UF47 199 aa24.82■■□□□ 1.56
FDPS-206ENST00000467076 EIF4G1Q04637 1599 aaKnown RBP24.54■■□□□ 1.52
FDPS-206ENST00000467076 CC2D2AQ9P2K1 1620 aa24.5■■□□□ 1.51
FDPS-206ENST00000467076 CECR2Q9BXF3 1484 aa24.28■■□□□ 1.48
FDPS-206ENST00000467076 SMARCA4P51532 1647 aa24.05■■□□□ 1.44
FDPS-206ENST00000467076 BAZ1AQ9NRL2 1556 aaPredicted RBP23.95■■□□□ 1.43
FDPS-206ENST00000467076 SMARCA2P51531 1590 aa23.86■■□□□ 1.41
FDPS-206ENST00000467076 ATAD2BQ9ULI0 1458 aa23.85■■□□□ 1.41
FDPS-206ENST00000467076 MROH2BQ7Z745 1585 aa23.82■■□□□ 1.4
FDPS-206ENST00000467076 NCAPD3P42695 1498 aa23.81■■□□□ 1.4
FDPS-206ENST00000467076 HMGXB3Q12766 1538 aa23.78■■□□□ 1.4
FDPS-206ENST00000467076 PEG3Q9GZU2 1588 aa23.75■■□□□ 1.39
FDPS-206ENST00000467076 BAZ1BQ9UIG0 1483 aaKnown RBP23.69■■□□□ 1.38
FDPS-206ENST00000467076 WIZO95785 1651 aa23.64■■□□□ 1.37
FDPS-206ENST00000467076 RSF1Q96T23 1441 aaPredicted RBP23.44■■□□□ 1.34
FDPS-206ENST00000467076 NESP48681 1621 aa23.38■■□□□ 1.33
FDPS-206ENST00000467076 TOP2AP11388 1531 aaKnown RBP23.32■■□□□ 1.32
FDPS-206ENST00000467076 ERCC6Q03468 1493 aa23.31■■□□□ 1.32
FDPS-206ENST00000467076 LAMC3Q9Y6N6 1575 aa23.31■■□□□ 1.32
FDPS-206ENST00000467076 KIF21AQ7Z4S6 1674 aa23.22■■□□□ 1.31
FDPS-206ENST00000467076 CADPSQ9ULU8 1353 aa23.12■■□□□ 1.29
FDPS-206ENST00000467076 THOC2Q8NI27 1593 aaKnown RBP23.1■■□□□ 1.29
FDPS-206ENST00000467076 PDS5BQ9NTI5 1447 aa23.08■■□□□ 1.28
FDPS-206ENST00000467076 CUX2O14529 1486 aa23.07■■□□□ 1.28
FDPS-206ENST00000467076 PRDM2Q13029 1718 aa23.05■■□□□ 1.28
FDPS-206ENST00000467076 CCDC88BA6NC98 1476 aa22.99■■□□□ 1.27
FDPS-206ENST00000467076 CFTRP13569 1480 aa22.98■■□□□ 1.27
FDPS-206ENST00000467076 FANCD2Q9BXW9 1451 aa22.92■■□□□ 1.26
FDPS-206ENST00000467076 CEP164Q9UPV0 1460 aa22.92■■□□□ 1.26
FDPS-206ENST00000467076 MRC2Q9UBG0 1479 aa22.89■■□□□ 1.25
FDPS-206ENST00000467076 WDR62O43379 1518 aa22.84■■□□□ 1.25
FDPS-206ENST00000467076 SUPT5HO00267 1087 aaKnown RBP22.79■■□□□ 1.24
FDPS-206ENST00000467076 URB2Q14146 1524 aaKnown RBP22.71■■□□□ 1.23
FDPS-206ENST00000467076 TOPBP1Q92547 1522 aa22.55■■□□□ 1.2
FDPS-206ENST00000467076 DNMBPQ6XZF7 1577 aa22.55■■□□□ 1.2
FDPS-206ENST00000467076 ABCC8Q09428 1581 aa22.49■■□□□ 1.19
FDPS-206ENST00000467076 IFT140Q96RY7 1462 aa22.41■■□□□ 1.18
FDPS-206ENST00000467076 DNAJC5Q9H3Z4 198 aa22.4■■□□□ 1.18
FDPS-206ENST00000467076 CUX1P39880 1505 aa22.36■■□□□ 1.17
FDPS-206ENST00000467076 TARBP1Q13395 1621 aaKnown RBP22.35■■□□□ 1.17
FDPS-206ENST00000467076 POLA1P09884 1462 aaPredicted RBP22.34■■□□□ 1.17
FDPS-206ENST00000467076 ZNF608Q9ULD9 1512 aaPredicted RBP22.34■■□□□ 1.17
FDPS-206ENST00000467076 EIF4G3O43432 1585 aaKnown RBP22.33■■□□□ 1.17
FDPS-206ENST00000467076 FGD5Q6ZNL6 1462 aa22.29■■□□□ 1.16
FDPS-206ENST00000467076 RAD54L2Q9Y4B4 1467 aa22.26■■□□□ 1.15
FDPS-206ENST00000467076 WDR97A6NE52 1622 aa22.23■■□□□ 1.15
FDPS-206ENST00000467076 SOGA1O94964 1423 aa22.21■■□□□ 1.15
FDPS-206ENST00000467076 BIVM-ERCC5R4GMW8 1640 aa22.2■■□□□ 1.14
FDPS-206ENST00000467076 AQRO60306 1485 aaKnown RBP eCLIP22.18■■□□□ 1.142e-7■■■■□ 26.3
FDPS-206ENST00000467076 SYNJ1O43426 1573 aa22.16■■□□□ 1.14
FDPS-206ENST00000467076 TOP2BQ02880 1626 aa22.15■■□□□ 1.14
FDPS-206ENST00000467076 CHD1O14646 1710 aa22.14■■□□□ 1.14
FDPS-206ENST00000467076 WRNQ14191 1432 aaPredicted RBP eCLIP22.13■■□□□ 1.13
FDPS-206ENST00000467076 PBRM1Q86U86 1689 aa22.11■■□□□ 1.13
FDPS-206ENST00000467076 TDRD9Q8NDG6 1382 aaKnown RBP22.1■■□□□ 1.13
FDPS-206ENST00000467076 ABCA5Q8WWZ7 1642 aa22.04■■□□□ 1.12
FDPS-206ENST00000467076 ABCA10Q8WWZ4 1543 aa22.04■■□□□ 1.12
FDPS-206ENST00000467076 OSCARQ8IYS5 282 aa22.02■■□□□ 1.12
FDPS-206ENST00000467076 SNAPC4Q5SXM2 1469 aa22.02■■□□□ 1.12
FDPS-206ENST00000467076 GRIN2BQ13224 1484 aa21.98■■□□□ 1.11
FDPS-206ENST00000467076 GAPVD1Q14C86 1478 aa21.98■■□□□ 1.11
FDPS-206ENST00000467076 MAGI1Q96QZ7 1491 aaPredicted RBP21.95■■□□□ 1.1
FDPS-206ENST00000467076 FBLN2P98095 1184 aa21.93■■□□□ 1.1
FDPS-206ENST00000467076 SYNJ2O15056 1496 aa21.86■■□□□ 1.09
FDPS-206ENST00000467076 RIMBP3CA6NJZ7 1639 aa21.85■■□□□ 1.09
FDPS-206ENST00000467076 RIMBP3BA6NNM3 1639 aa21.85■■□□□ 1.09
FDPS-206ENST00000467076 RIMBP3Q9UFD9 1639 aa21.85■■□□□ 1.09
FDPS-206ENST00000467076 ADAMTS12P58397 1594 aa21.84■■□□□ 1.09
FDPS-206ENST00000467076 CHMP7Q8WUX9 453 aaPredicted RBP21.82■■□□□ 1.08
FDPS-206ENST00000467076 ERICH3Q5RHP9 1530 aa21.79■■□□□ 1.08
FDPS-206ENST00000467076 ARHGEF11O15085 1522 aa21.78■■□□□ 1.08
FDPS-206ENST00000467076 CLASP1Q7Z460 1538 aa21.78■■□□□ 1.08
FDPS-206ENST00000467076 GRIN2AQ12879 1464 aa21.72■■□□□ 1.07
FDPS-206ENST00000467076 TRIM41Q8WV44 630 aa21.72■■□□□ 1.07
FDPS-206ENST00000467076 FHAD1B1AJZ9 1412 aa21.7■■□□□ 1.06
FDPS-206ENST00000467076 CEP170Q5SW79 1584 aa21.68■■□□□ 1.06
FDPS-206ENST00000467076 KIF27Q86VH2 1401 aa21.66■■□□□ 1.06
FDPS-206ENST00000467076 CUL7Q14999 1698 aa21.64■■□□□ 1.05
FDPS-206ENST00000467076 NUP160Q12769 1436 aa21.6■■□□□ 1.05
FDPS-206ENST00000467076 ARAP1Q96P48 1450 aa21.59■■□□□ 1.05
FDPS-206ENST00000467076 IGF1RP08069 1367 aa21.53■■□□□ 1.04
FDPS-206ENST00000467076 SHROOM2Q13796 1616 aa21.53■■□□□ 1.04
FDPS-206ENST00000467076 RUSC2Q8N2Y8 1516 aa21.53■■□□□ 1.04
FDPS-206ENST00000467076 CYB5RLQ6IPT4 315 aa21.51■■□□□ 1.03
FDPS-206ENST00000467076 ERCC6L2Q5T890 1561 aa21.5■■□□□ 1.03
FDPS-206ENST00000467076 CARMIL1Q5VZK9 1371 aa21.44■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms