RNA–Protein interactions for RNA: ENST00000425080.1

LBR-205, Transcript of lamin B receptor, humanhuman

TSL 3

Gene LBR, Length 874 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LBR-205ENST00000425080 AEBP2Q6ZN18 517 aaPredicted RBP27.62■■■□□ 2.01
LBR-205ENST00000425080 CHIC1Q5VXU3 224 aa26.03■■□□□ 1.76
LBR-205ENST00000425080 SENP3Q9H4L4 574 aaPredicted RBP23.82■■□□□ 1.4
LBR-205ENST00000425080 PHF23Q9BUL5 403 aaPredicted RBP23.35■■□□□ 1.33
LBR-205ENST00000425080 FOXD1Q16676 465 aa22.09■■□□□ 1.13
LBR-205ENST00000425080 NISCHQ9Y2I1 1504 aa21.7■■□□□ 1.06
LBR-205ENST00000425080 MSH5O43196 834 aa20.99■□□□□ 0.95
LBR-205ENST00000425080 POTEDQ86YR6 584 aa20.9■□□□□ 0.94
LBR-205ENST00000425080 PLPPR3Q6T4P5 718 aa20.71■□□□□ 0.91
LBR-205ENST00000425080 PIAS4Q8N2W9 510 aaPredicted RBP20.6■□□□□ 0.89
LBR-205ENST00000425080 PPP6R1Q9UPN7 881 aa20.32■□□□□ 0.84
LBR-205ENST00000425080 ADRA2BP18089 450 aa20.24■□□□□ 0.83
LBR-205ENST00000425080 CCDC180Q9P1Z9 1646 aa19.11■□□□□ 0.65
LBR-205ENST00000425080 DMRT2Q9Y5R5 561 aa18.79■□□□□ 0.6
LBR-205ENST00000425080 SCAF1Q9H7N4 1312 aaKnown RBP18.77■□□□□ 0.6
LBR-205ENST00000425080 MAPK8IP2Q13387 824 aaPredicted RBP18.66■□□□□ 0.58
LBR-205ENST00000425080 ABCC9O60706 1549 aa18.43■□□□□ 0.54
LBR-205ENST00000425080 ZCCHC6Q5VYS8 1495 aaKnown RBP18.14■□□□□ 0.5
LBR-205ENST00000425080 CACNB1Q02641 598 aaPredicted RBP18.1■□□□□ 0.49
LBR-205ENST00000425080 DCAF8L2P0C7V8 631 aa18.03■□□□□ 0.48
LBR-205ENST00000425080 PPP4R3CPQ6ZMV5 832 aa18.02■□□□□ 0.48
LBR-205ENST00000425080 DCAF1Q9Y4B6 1507 aa18■□□□□ 0.47
LBR-205ENST00000425080 HOXD11P31277 338 aaPredicted RBP17.99■□□□□ 0.47
LBR-205ENST00000425080 MYO15BQ96JP2 1530 aa17.98■□□□□ 0.47
LBR-205ENST00000425080 NACADO15069 1562 aa17.95■□□□□ 0.46
LBR-205ENST00000425080 DCAF8L1A6NGE4 600 aa17.93■□□□□ 0.46
LBR-205ENST00000425080 RB1CC1Q8TDY2 1594 aa17.89■□□□□ 0.45
LBR-205ENST00000425080 CNKSR2Q8WXI2 1034 aa17.84■□□□□ 0.45
LBR-205ENST00000425080 RNF39Q9H2S5 420 aa17.79■□□□□ 0.44
LBR-205ENST00000425080 RNF216Q9NWF9 866 aaPredicted RBP17.78■□□□□ 0.44
LBR-205ENST00000425080 DNAJC5BQ9UF47 199 aa17.61■□□□□ 0.41
LBR-205ENST00000425080 C1QBPQ07021 282 aaKnown RBP17.6■□□□□ 0.41
LBR-205ENST00000425080 SCRIBQ14160 1630 aa17.45■□□□□ 0.38
LBR-205ENST00000425080 NCBP3Q53F19 620 aaKnown RBP17.35■□□□□ 0.37
LBR-205ENST00000425080 UNC13AQ9UPW8 1703 aa17.3■□□□□ 0.36
LBR-205ENST00000425080 SHROOM4Q9ULL8 1493 aa17.3■□□□□ 0.36
LBR-205ENST00000425080 PABPN1Q86U42 306 aaKnown RBP eCLIP17.29■□□□□ 0.36
LBR-205ENST00000425080 BICRAQ9NZM4 1560 aa17.27■□□□□ 0.35
LBR-205ENST00000425080 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.09■□□□□ 0.33
LBR-205ENST00000425080 NPM3O75607 178 aaKnown RBP16.96■□□□□ 0.31
LBR-205ENST00000425080 EIF4G1Q04637 1599 aaKnown RBP16.83■□□□□ 0.28
LBR-205ENST00000425080 CECR2Q9BXF3 1484 aa16.83■□□□□ 0.28
LBR-205ENST00000425080 BAZ1AQ9NRL2 1556 aaPredicted RBP16.81■□□□□ 0.28
LBR-205ENST00000425080 SMARCA4P51532 1647 aa16.73■□□□□ 0.27
LBR-205ENST00000425080 MROH2BQ7Z745 1585 aa16.69■□□□□ 0.26
LBR-205ENST00000425080 RSF1Q96T23 1441 aaPredicted RBP16.66■□□□□ 0.26
LBR-205ENST00000425080 CC2D2AQ9P2K1 1620 aa16.66■□□□□ 0.26
LBR-205ENST00000425080 U3KPZ7 1027 aaPredicted RBP16.65■□□□□ 0.26
LBR-205ENST00000425080 SMARCA2P51531 1590 aa16.62■□□□□ 0.25
LBR-205ENST00000425080 ATAD2BQ9ULI0 1458 aa16.61■□□□□ 0.25
LBR-205ENST00000425080 PEG3Q9GZU2 1588 aa16.6■□□□□ 0.25
LBR-205ENST00000425080 NCAPD3P42695 1498 aa16.58■□□□□ 0.24
LBR-205ENST00000425080 DSG3P32926 999 aa16.52■□□□□ 0.24
LBR-205ENST00000425080 CAPN15O75808 1086 aa16.51■□□□□ 0.23
LBR-205ENST00000425080 HMGXB3Q12766 1538 aa16.5■□□□□ 0.23
LBR-205ENST00000425080 BAZ1BQ9UIG0 1483 aaKnown RBP16.5■□□□□ 0.23
LBR-205ENST00000425080 WIZO95785 1651 aa16.48■□□□□ 0.23
LBR-205ENST00000425080 SUPT5HO00267 1087 aaKnown RBP16.47■□□□□ 0.23
LBR-205ENST00000425080 SPINK5Q9NQ38 1064 aaPredicted RBP16.45■□□□□ 0.22
LBR-205ENST00000425080 TOP2AP11388 1531 aaKnown RBP16.4■□□□□ 0.22
LBR-205ENST00000425080 APLP2Q06481 763 aa16.39■□□□□ 0.21
LBR-205ENST00000425080 POTEHQ6S545 545 aa16.35■□□□□ 0.21
LBR-205ENST00000425080 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.27■□□□□ 0.2
LBR-205ENST00000425080 HNRNPUL2Q1KMD3 747 aaKnown RBP16.27■□□□□ 0.2
LBR-205ENST00000425080 KCNA4P22459 653 aa16.26■□□□□ 0.19
LBR-205ENST00000425080 SLC4A2P04920 1241 aa16.25■□□□□ 0.19
LBR-205ENST00000425080 ZNF219Q9P2Y4 722 aaPredicted RBP16.25■□□□□ 0.19
LBR-205ENST00000425080 CCDC88BA6NC98 1476 aa16.21■□□□□ 0.19
LBR-205ENST00000425080 TRHP20396 242 aaPredicted RBP16.13■□□□□ 0.17
LBR-205ENST00000425080 CADPSQ9ULU8 1353 aa16.13■□□□□ 0.17
LBR-205ENST00000425080 SAMD1Q6SPF0 538 aaPredicted RBP16.11■□□□□ 0.17
LBR-205ENST00000425080 CFTRP13569 1480 aa16.07■□□□□ 0.16
LBR-205ENST00000425080 LAMC3Q9Y6N6 1575 aa16.06■□□□□ 0.16
LBR-205ENST00000425080 ABCB7O75027 752 aa16.01■□□□□ 0.15
LBR-205ENST00000425080 PDS5BQ9NTI5 1447 aa16.01■□□□□ 0.15
LBR-205ENST00000425080 NESP48681 1621 aa16.01■□□□□ 0.15
LBR-205ENST00000425080 RBM42Q9BTD8 480 aaKnown RBP15.92■□□□□ 0.14
LBR-205ENST00000425080 FANCD2Q9BXW9 1451 aa15.91■□□□□ 0.14
LBR-205ENST00000425080 ERCC6Q03468 1493 aa15.91■□□□□ 0.14
LBR-205ENST00000425080 CEP164Q9UPV0 1460 aa15.87■□□□□ 0.13
LBR-205ENST00000425080 PRDM2Q13029 1718 aa15.83■□□□□ 0.13
LBR-205ENST00000425080 MRC2Q9UBG0 1479 aa15.78■□□□□ 0.12
LBR-205ENST00000425080 MYCNP04198 464 aaPredicted RBP15.78■□□□□ 0.12
LBR-205ENST00000425080 KIF21AQ7Z4S6 1674 aa15.76■□□□□ 0.11
LBR-205ENST00000425080 ABCC8Q09428 1581 aa15.75■□□□□ 0.11
LBR-205ENST00000425080 WRNQ14191 1432 aaPredicted RBP eCLIP15.72■□□□□ 0.11
LBR-205ENST00000425080 URB2Q14146 1524 aaKnown RBP15.7■□□□□ 0.1
LBR-205ENST00000425080 THOC2Q8NI27 1593 aaKnown RBP15.7■□□□□ 0.1
LBR-205ENST00000425080 WDR62O43379 1518 aa15.69■□□□□ 0.1
LBR-205ENST00000425080 DNMBPQ6XZF7 1577 aa15.68■□□□□ 0.1
LBR-205ENST00000425080 TOPBP1Q92547 1522 aa15.67■□□□□ 0.1
LBR-205ENST00000425080 POLA2Q14181 598 aa15.65■□□□□ 0.1
LBR-205ENST00000425080 CUX1P39880 1505 aa15.64■□□□□ 0.09
LBR-205ENST00000425080 CUX2O14529 1486 aa15.64■□□□□ 0.09
LBR-205ENST00000425080 TOP2BQ02880 1626 aa15.61■□□□□ 0.09
LBR-205ENST00000425080 SYNJ1O43426 1573 aa15.58■□□□□ 0.09
LBR-205ENST00000425080 CHRDL2Q6WN34 429 aa15.58■□□□□ 0.08
LBR-205ENST00000425080 TRIM41Q8WV44 630 aa15.58■□□□□ 0.08
LBR-205ENST00000425080 POLA1P09884 1462 aaPredicted RBP15.57■□□□□ 0.08
LBR-205ENST00000425080 FGD5Q6ZNL6 1462 aa15.57■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms