RNA–Protein interactions for RNA: ENST00000548084.1

NACA-209, Transcript of nascent polypeptide associated complex subunit alpha, humanhuman

TSL 3

Gene NACA, Length 542 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NACA-209ENST00000548084 NISCHQ9Y2I1 1504 aa29.84■■■□□ 2.37
NACA-209ENST00000548084 ABCC9O60706 1549 aa26.64■■□□□ 1.85
NACA-209ENST00000548084 CCDC180Q9P1Z9 1646 aa26.55■■□□□ 1.84
NACA-209ENST00000548084 DNAJC5BQ9UF47 199 aa25.27■■□□□ 1.64
NACA-209ENST00000548084 RB1CC1Q8TDY2 1594 aa25.11■■□□□ 1.61
NACA-209ENST00000548084 DCAF8L2P0C7V8 631 aa25.09■■□□□ 1.61
NACA-209ENST00000548084 NACADO15069 1562 aa25.08■■□□□ 1.61
NACA-209ENST00000548084 MYO15BQ96JP2 1530 aa24.94■■□□□ 1.58
NACA-209ENST00000548084 ZCCHC6Q5VYS8 1495 aaKnown RBP24.82■■□□□ 1.56
NACA-209ENST00000548084 DCAF1Q9Y4B6 1507 aa24.76■■□□□ 1.55
NACA-209ENST00000548084 PABPN1Q86U42 306 aaKnown RBP eCLIP24.74■■□□□ 1.55
NACA-209ENST00000548084 UNC13AQ9UPW8 1703 aa24.58■■□□□ 1.52
NACA-209ENST00000548084 BICRAQ9NZM4 1560 aa24.4■■□□□ 1.5
NACA-209ENST00000548084 SHROOM4Q9ULL8 1493 aa24.2■■□□□ 1.47
NACA-209ENST00000548084 SCRIBQ14160 1630 aa24.15■■□□□ 1.46
NACA-209ENST00000548084 CC2D2AQ9P2K1 1620 aa24■■□□□ 1.43
NACA-209ENST00000548084 CECR2Q9BXF3 1484 aa24■■□□□ 1.43
NACA-209ENST00000548084 EIF4G1Q04637 1599 aaKnown RBP23.84■■□□□ 1.41
NACA-209ENST00000548084 DNAJC5Q9H3Z4 198 aa23.43■■□□□ 1.34
NACA-209ENST00000548084 BAZ1AQ9NRL2 1556 aaPredicted RBP23.2■■□□□ 1.3
NACA-209ENST00000548084 NCAPD3P42695 1498 aa23.13■■□□□ 1.29
NACA-209ENST00000548084 SMARCA2P51531 1590 aa23.13■■□□□ 1.29
NACA-209ENST00000548084 SMARCA4P51532 1647 aa23.12■■□□□ 1.29
NACA-209ENST00000548084 ATAD2BQ9ULI0 1458 aa23.08■■□□□ 1.29
NACA-209ENST00000548084 CUX2O14529 1486 aa23.03■■□□□ 1.28
NACA-209ENST00000548084 ERCC6Q03468 1493 aa23.03■■□□□ 1.28
NACA-209ENST00000548084 HMGXB3Q12766 1538 aa22.98■■□□□ 1.27
NACA-209ENST00000548084 PEG3Q9GZU2 1588 aa22.95■■□□□ 1.26
NACA-209ENST00000548084 BAZ1BQ9UIG0 1483 aaKnown RBP22.93■■□□□ 1.26
NACA-209ENST00000548084 MROH2BQ7Z745 1585 aa22.91■■□□□ 1.26
NACA-209ENST00000548084 NESP48681 1621 aa22.77■■□□□ 1.24
NACA-209ENST00000548084 RSF1Q96T23 1441 aaPredicted RBP22.69■■□□□ 1.22
NACA-209ENST00000548084 WIZO95785 1651 aa22.62■■□□□ 1.21
NACA-209ENST00000548084 THOC2Q8NI27 1593 aaKnown RBP22.59■■□□□ 1.21
NACA-209ENST00000548084 LAMC3Q9Y6N6 1575 aa22.53■■□□□ 1.2
NACA-209ENST00000548084 TOP2AP11388 1531 aaKnown RBP22.5■■□□□ 1.19
NACA-209ENST00000548084 PDS5BQ9NTI5 1447 aa22.49■■□□□ 1.19
NACA-209ENST00000548084 CADPSQ9ULU8 1353 aa22.49■■□□□ 1.19
NACA-209ENST00000548084 KIF21AQ7Z4S6 1674 aa22.46■■□□□ 1.19
NACA-209ENST00000548084 TRIM41Q8WV44 630 aa22.39■■□□□ 1.17
NACA-209ENST00000548084 CFTRP13569 1480 aa22.28■■□□□ 1.16
NACA-209ENST00000548084 MRC2Q9UBG0 1479 aa22.22■■□□□ 1.15
NACA-209ENST00000548084 CCDC88BA6NC98 1476 aa22.22■■□□□ 1.15
NACA-209ENST00000548084 CEP164Q9UPV0 1460 aa22.19■■□□□ 1.14
NACA-209ENST00000548084 FANCD2Q9BXW9 1451 aa22.17■■□□□ 1.14
NACA-209ENST00000548084 WDR62O43379 1518 aa22.16■■□□□ 1.14
NACA-209ENST00000548084 SUPT5HO00267 1087 aaKnown RBP22.12■■□□□ 1.13
NACA-209ENST00000548084 PRDM2Q13029 1718 aa21.96■■□□□ 1.11
NACA-209ENST00000548084 ABCC8Q09428 1581 aa21.95■■□□□ 1.1
NACA-209ENST00000548084 OSCARQ8IYS5 282 aa21.91■■□□□ 1.1
NACA-209ENST00000548084 URB2Q14146 1524 aaKnown RBP21.85■■□□□ 1.09
NACA-209ENST00000548084 TOPBP1Q92547 1522 aa21.77■■□□□ 1.08
NACA-209ENST00000548084 IFT140Q96RY7 1462 aa21.76■■□□□ 1.07
NACA-209ENST00000548084 DNMBPQ6XZF7 1577 aa21.75■■□□□ 1.07
NACA-209ENST00000548084 RIMBP3CA6NJZ7 1639 aa21.73■■□□□ 1.07
NACA-209ENST00000548084 RIMBP3BA6NNM3 1639 aa21.73■■□□□ 1.07
NACA-209ENST00000548084 RIMBP3Q9UFD9 1639 aa21.73■■□□□ 1.07
NACA-209ENST00000548084 ZNF608Q9ULD9 1512 aaPredicted RBP21.65■■□□□ 1.06
NACA-209ENST00000548084 ARHGEF11O15085 1522 aa21.61■■□□□ 1.05
NACA-209ENST00000548084 POLA1P09884 1462 aaPredicted RBP21.58■■□□□ 1.04
NACA-209ENST00000548084 SOGA1O94964 1423 aa21.57■■□□□ 1.04
NACA-209ENST00000548084 EIF4G3O43432 1585 aaKnown RBP21.53■■□□□ 1.04
NACA-209ENST00000548084 FGD5Q6ZNL6 1462 aa21.51■■□□□ 1.03
NACA-209ENST00000548084 CUX1P39880 1505 aa21.5■■□□□ 1.03
NACA-209ENST00000548084 CYB5RLQ6IPT4 315 aa21.49■■□□□ 1.03
NACA-209ENST00000548084 WDR97A6NE52 1622 aa21.48■■□□□ 1.03
NACA-209ENST00000548084 WRNQ14191 1432 aaPredicted RBP eCLIP21.47■■□□□ 1.03
NACA-209ENST00000548084 TARBP1Q13395 1621 aaKnown RBP21.46■■□□□ 1.03
NACA-209ENST00000548084 CHD1O14646 1710 aa21.46■■□□□ 1.03
NACA-209ENST00000548084 RAD54L2Q9Y4B4 1467 aa21.44■■□□□ 1.02
NACA-209ENST00000548084 AQRO60306 1485 aaKnown RBP eCLIP21.42■■□□□ 1.024e-7■■□□□ 13.5
NACA-209ENST00000548084 TRHP20396 242 aaPredicted RBP21.41■■□□□ 1.02
NACA-209ENST00000548084 TDRD9Q8NDG6 1382 aaKnown RBP21.4■■□□□ 1.02
NACA-209ENST00000548084 FBLN2P98095 1184 aa21.39■■□□□ 1.01
NACA-209ENST00000548084 ARAP1Q96P48 1450 aa21.39■■□□□ 1.01
NACA-209ENST00000548084 TOP2BQ02880 1626 aa21.36■■□□□ 1.01
NACA-209ENST00000548084 ABCA10Q8WWZ4 1543 aa21.34■■□□□ 1.01
NACA-209ENST00000548084 GRIN2BQ13224 1484 aa21.34■■□□□ 1.01
NACA-209ENST00000548084 MAGI1Q96QZ7 1491 aaPredicted RBP21.31■■□□□ 1
NACA-209ENST00000548084 BIVM-ERCC5R4GMW8 1640 aa21.3■■□□□ 1
NACA-209ENST00000548084 CHMP7Q8WUX9 453 aaPredicted RBP21.3■■□□□ 1
NACA-209ENST00000548084 GAPVD1Q14C86 1478 aa21.3■■□□□ 1
NACA-209ENST00000548084 SYNJ1O43426 1573 aa21.25■□□□□ 0.99
NACA-209ENST00000548084 SNAPC4Q5SXM2 1469 aa21.24■□□□□ 0.99
NACA-209ENST00000548084 SYNJ2O15056 1496 aa21.2■□□□□ 0.98
NACA-209ENST00000548084 ABCA5Q8WWZ7 1642 aa21.17■□□□□ 0.98
NACA-209ENST00000548084 CLASP1Q7Z460 1538 aa21.14■□□□□ 0.98
NACA-209ENST00000548084 ERICH3Q5RHP9 1530 aa21.11■□□□□ 0.97
NACA-209ENST00000548084 KIF27Q86VH2 1401 aa21.11■□□□□ 0.97
NACA-209ENST00000548084 PBRM1Q86U86 1689 aa21.1■□□□□ 0.97
NACA-209ENST00000548084 FHAD1B1AJZ9 1412 aa21.1■□□□□ 0.97
NACA-209ENST00000548084 AEBP2Q6ZN18 517 aaPredicted RBP21.06■□□□□ 0.96
NACA-209ENST00000548084 GRIN2AQ12879 1464 aa21.01■□□□□ 0.95
NACA-209ENST00000548084 ADAMTS12P58397 1594 aa20.99■□□□□ 0.95
NACA-209ENST00000548084 IGF1RP08069 1367 aa20.94■□□□□ 0.94
NACA-209ENST00000548084 NUP160Q12769 1436 aa20.92■□□□□ 0.94
NACA-209ENST00000548084 CUL7Q14999 1698 aa20.88■□□□□ 0.93
NACA-209ENST00000548084 CARMIL1Q5VZK9 1371 aa20.86■□□□□ 0.93
NACA-209ENST00000548084 ERCC6L2Q5T890 1561 aa20.85■□□□□ 0.93
NACA-209ENST00000548084 CEP170Q5SW79 1584 aa20.8■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms