RNA–Protein interactions for RNA: ENST00000533494.5

EEF1D-248, Transcript of eukaryotic translation elongation factor 1 delta, humanhuman

TSL 5

Gene EEF1D, Length 758 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EEF1D-248ENST00000533494 NISCHQ9Y2I1 1504 aa31.05■■■□□ 2.56
EEF1D-248ENST00000533494 ABCC9O60706 1549 aa28.46■■■□□ 2.15
EEF1D-248ENST00000533494 CCDC180Q9P1Z9 1646 aa27.78■■■□□ 2.04
EEF1D-248ENST00000533494 DNAJC5BQ9UF47 199 aa27.35■■□□□ 1.97
EEF1D-248ENST00000533494 RB1CC1Q8TDY2 1594 aa26.72■■□□□ 1.87
EEF1D-248ENST00000533494 PABPN1Q86U42 306 aaKnown RBP eCLIP26.45■■□□□ 1.822e-7■■□□□ 14
EEF1D-248ENST00000533494 NACADO15069 1562 aa26.41■■□□□ 1.82
EEF1D-248ENST00000533494 UNC13AQ9UPW8 1703 aa26.2■■□□□ 1.79
EEF1D-248ENST00000533494 DCAF8L2P0C7V8 631 aa26.17■■□□□ 1.78
EEF1D-248ENST00000533494 BICRAQ9NZM4 1560 aa26.13■■□□□ 1.77
EEF1D-248ENST00000533494 ZCCHC6Q5VYS8 1495 aaKnown RBP25.92■■□□□ 1.74
EEF1D-248ENST00000533494 MYO15BQ96JP2 1530 aa25.87■■□□□ 1.73
EEF1D-248ENST00000533494 DCAF1Q9Y4B6 1507 aa25.7■■□□□ 1.7
EEF1D-248ENST00000533494 CECR2Q9BXF3 1484 aa25.66■■□□□ 1.7
EEF1D-248ENST00000533494 CC2D2AQ9P2K1 1620 aa25.65■■□□□ 1.7
EEF1D-248ENST00000533494 SHROOM4Q9ULL8 1493 aa25.53■■□□□ 1.68
EEF1D-248ENST00000533494 EIF4G1Q04637 1599 aaKnown RBP25.46■■□□□ 1.67
EEF1D-248ENST00000533494 DNAJC5Q9H3Z4 198 aa25.38■■□□□ 1.65
EEF1D-248ENST00000533494 SCRIBQ14160 1630 aa25.37■■□□□ 1.65
EEF1D-248ENST00000533494 CUX2O14529 1486 aa24.67■■□□□ 1.54
EEF1D-248ENST00000533494 ERCC6Q03468 1493 aa24.51■■□□□ 1.51
EEF1D-248ENST00000533494 NCAPD3P42695 1498 aa24.45■■□□□ 1.51
EEF1D-248ENST00000533494 NESP48681 1621 aa24.34■■□□□ 1.49
EEF1D-248ENST00000533494 ATAD2BQ9ULI0 1458 aa24.32■■□□□ 1.48
EEF1D-248ENST00000533494 HMGXB3Q12766 1538 aa24.18■■□□□ 1.46
EEF1D-248ENST00000533494 THOC2Q8NI27 1593 aaKnown RBP24.16■■□□□ 1.46
EEF1D-248ENST00000533494 SMARCA4P51532 1647 aa24.13■■□□□ 1.45
EEF1D-248ENST00000533494 SMARCA2P51531 1590 aa24.12■■□□□ 1.45
EEF1D-248ENST00000533494 BAZ1AQ9NRL2 1556 aaPredicted RBP24.03■■□□□ 1.44
EEF1D-248ENST00000533494 TRIM41Q8WV44 630 aa24.01■■□□□ 1.43
EEF1D-248ENST00000533494 BAZ1BQ9UIG0 1483 aaKnown RBP23.99■■□□□ 1.43
EEF1D-248ENST00000533494 MROH2BQ7Z745 1585 aa23.94■■□□□ 1.42
EEF1D-248ENST00000533494 KIF21AQ7Z4S6 1674 aa23.92■■□□□ 1.42
EEF1D-248ENST00000533494 LAMC3Q9Y6N6 1575 aa23.92■■□□□ 1.42
EEF1D-248ENST00000533494 PEG3Q9GZU2 1588 aa23.9■■□□□ 1.42
EEF1D-248ENST00000533494 PDS5BQ9NTI5 1447 aa23.79■■□□□ 1.4
EEF1D-248ENST00000533494 RSF1Q96T23 1441 aaPredicted RBP23.75■■□□□ 1.39
EEF1D-248ENST00000533494 MRC2Q9UBG0 1479 aa23.68■■□□□ 1.38
EEF1D-248ENST00000533494 CADPSQ9ULU8 1353 aa23.67■■□□□ 1.38
EEF1D-248ENST00000533494 WIZO95785 1651 aa23.67■■□□□ 1.38
EEF1D-248ENST00000533494 WDR62O43379 1518 aa23.66■■□□□ 1.38
EEF1D-248ENST00000533494 TOP2AP11388 1531 aaKnown RBP23.44■■□□□ 1.34
EEF1D-248ENST00000533494 CEP164Q9UPV0 1460 aa23.44■■□□□ 1.34
EEF1D-248ENST00000533494 OSCARQ8IYS5 282 aa23.44■■□□□ 1.34
EEF1D-248ENST00000533494 FANCD2Q9BXW9 1451 aa23.41■■□□□ 1.34
EEF1D-248ENST00000533494 URB2Q14146 1524 aaKnown RBP23.32■■□□□ 1.32
EEF1D-248ENST00000533494 CFTRP13569 1480 aa23.3■■□□□ 1.32
EEF1D-248ENST00000533494 RIMBP3CA6NJZ7 1639 aa23.27■■□□□ 1.32
EEF1D-248ENST00000533494 RIMBP3BA6NNM3 1639 aa23.27■■□□□ 1.32
EEF1D-248ENST00000533494 RIMBP3Q9UFD9 1639 aa23.27■■□□□ 1.32
EEF1D-248ENST00000533494 SUPT5HO00267 1087 aaKnown RBP23.24■■□□□ 1.31
EEF1D-248ENST00000533494 CCDC88BA6NC98 1476 aa23.17■■□□□ 1.3
EEF1D-248ENST00000533494 ZNF608Q9ULD9 1512 aaPredicted RBP23.15■■□□□ 1.3
EEF1D-248ENST00000533494 ARHGEF11O15085 1522 aa23.14■■□□□ 1.3
EEF1D-248ENST00000533494 IFT140Q96RY7 1462 aa23■■□□□ 1.27
EEF1D-248ENST00000533494 CYB5RLQ6IPT4 315 aa22.99■■□□□ 1.27
EEF1D-248ENST00000533494 TOPBP1Q92547 1522 aa22.92■■□□□ 1.26
EEF1D-248ENST00000533494 ARAP1Q96P48 1450 aa22.92■■□□□ 1.26
EEF1D-248ENST00000533494 EIF4G3O43432 1585 aaKnown RBP22.91■■□□□ 1.26
EEF1D-248ENST00000533494 PRDM2Q13029 1718 aa22.91■■□□□ 1.26
EEF1D-248ENST00000533494 TRHP20396 242 aaPredicted RBP22.84■■□□□ 1.25
EEF1D-248ENST00000533494 AQRO60306 1485 aaKnown RBP eCLIP22.83■■□□□ 1.259e-8■■■■■ 45.4
EEF1D-248ENST00000533494 CHD1O14646 1710 aa22.82■■□□□ 1.24
EEF1D-248ENST00000533494 TARBP1Q13395 1621 aaKnown RBP22.79■■□□□ 1.24
EEF1D-248ENST00000533494 DNMBPQ6XZF7 1577 aa22.75■■□□□ 1.23
EEF1D-248ENST00000533494 ABCC8Q09428 1581 aa22.7■■□□□ 1.22
EEF1D-248ENST00000533494 FBLN2P98095 1184 aa22.69■■□□□ 1.22
EEF1D-248ENST00000533494 POLA1P09884 1462 aaPredicted RBP22.66■■□□□ 1.22
EEF1D-248ENST00000533494 RAD54L2Q9Y4B4 1467 aa22.63■■□□□ 1.21
EEF1D-248ENST00000533494 CLASP1Q7Z460 1538 aa22.61■■□□□ 1.21
EEF1D-248ENST00000533494 TDRD9Q8NDG6 1382 aaKnown RBP22.59■■□□□ 1.21
EEF1D-248ENST00000533494 SNAPC4Q5SXM2 1469 aa22.55■■□□□ 1.2
EEF1D-248ENST00000533494 AEBP2Q6ZN18 517 aaPredicted RBP22.52■■□□□ 1.2
EEF1D-248ENST00000533494 SOGA1O94964 1423 aa22.5■■□□□ 1.19
EEF1D-248ENST00000533494 CUX1P39880 1505 aa22.46■■□□□ 1.19
EEF1D-248ENST00000533494 SYNJ1O43426 1573 aa22.42■■□□□ 1.18
EEF1D-248ENST00000533494 FGD5Q6ZNL6 1462 aa22.42■■□□□ 1.18
EEF1D-248ENST00000533494 CHMP7Q8WUX9 453 aaPredicted RBP22.41■■□□□ 1.18
EEF1D-248ENST00000533494 MAGI1Q96QZ7 1491 aaPredicted RBP22.4■■□□□ 1.18
EEF1D-248ENST00000533494 WDR97A6NE52 1622 aa22.37■■□□□ 1.17
EEF1D-248ENST00000533494 GAPVD1Q14C86 1478 aa22.36■■□□□ 1.17
EEF1D-248ENST00000533494 WRNQ14191 1432 aaPredicted RBP eCLIP22.36■■□□□ 1.172e-6■■■□□ 16.6
EEF1D-248ENST00000533494 SYNJ2O15056 1496 aa22.35■■□□□ 1.17
EEF1D-248ENST00000533494 GRIN2BQ13224 1484 aa22.35■■□□□ 1.17
EEF1D-248ENST00000533494 ERCC6L2Q5T890 1561 aa22.29■■□□□ 1.16
EEF1D-248ENST00000533494 TOP2BQ02880 1626 aa22.29■■□□□ 1.16
EEF1D-248ENST00000533494 BIVM-ERCC5R4GMW8 1640 aa22.28■■□□□ 1.16
EEF1D-248ENST00000533494 PBRM1Q86U86 1689 aa22.22■■□□□ 1.15
EEF1D-248ENST00000533494 ABCA5Q8WWZ7 1642 aa22.16■■□□□ 1.14
EEF1D-248ENST00000533494 ABCA10Q8WWZ4 1543 aa22.13■■□□□ 1.13
EEF1D-248ENST00000533494 CEP170Q5SW79 1584 aa22.1■■□□□ 1.13
EEF1D-248ENST00000533494 GRIN2AQ12879 1464 aa22.09■■□□□ 1.13
EEF1D-248ENST00000533494 NUP160Q12769 1436 aa22.07■■□□□ 1.12
EEF1D-248ENST00000533494 KIF13AQ9H1H9 1805 aa22.04■■□□□ 1.12
EEF1D-248ENST00000533494 ADAMTS12P58397 1594 aa22.03■■□□□ 1.12
EEF1D-248ENST00000533494 SHROOM2Q13796 1616 aa22.02■■□□□ 1.12
EEF1D-248ENST00000533494 FHAD1B1AJZ9 1412 aa21.89■■□□□ 1.1
EEF1D-248ENST00000533494 PRG4Q92954 1404 aaPredicted RBP21.88■■□□□ 1.09
EEF1D-248ENST00000533494 KDM4FA0A1W2PPD8 638 aa21.87■■□□□ 1.09
EEF1D-248ENST00000533494 KIF27Q86VH2 1401 aa21.87■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms