RNA–Protein interactions for RNA: ENST00000563781.5

HERPUD1-207, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 3

Gene HERPUD1, Length 774 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-207ENST00000563781 AEBP2Q6ZN18 517 aaPredicted RBP17.73■□□□□ 0.43
HERPUD1-207ENST00000563781 CHIC1Q5VXU3 224 aa17.37■□□□□ 0.37
HERPUD1-207ENST00000563781 PHF23Q9BUL5 403 aaPredicted RBP15.31■□□□□ 0.04
HERPUD1-207ENST00000563781 SENP3Q9H4L4 574 aaPredicted RBP15.01□□□□□ -0.01
HERPUD1-207ENST00000563781 PLPPR3Q6T4P5 718 aa14.12□□□□□ -0.15
HERPUD1-207ENST00000563781 FOXD1Q16676 465 aa13.94□□□□□ -0.18
HERPUD1-207ENST00000563781 PPP6R1Q9UPN7 881 aa13.48□□□□□ -0.25
HERPUD1-207ENST00000563781 ADRA2BP18089 450 aa13.46□□□□□ -0.25
HERPUD1-207ENST00000563781 PIAS4Q8N2W9 510 aaPredicted RBP13.14□□□□□ -0.31
HERPUD1-207ENST00000563781 MSH5O43196 834 aa12.81□□□□□ -0.36
HERPUD1-207ENST00000563781 PPP4R3CPQ6ZMV5 832 aa12.46□□□□□ -0.41
HERPUD1-207ENST00000563781 NISCHQ9Y2I1 1504 aa12.33□□□□□ -0.44
HERPUD1-207ENST00000563781 SCAF1Q9H7N4 1312 aaKnown RBP12.29□□□□□ -0.44
HERPUD1-207ENST00000563781 KCNA4P22459 653 aa12.23□□□□□ -0.45
HERPUD1-207ENST00000563781 MAPK8IP2Q13387 824 aaPredicted RBP12.2□□□□□ -0.46
HERPUD1-207ENST00000563781 NCBP3Q53F19 620 aaKnown RBP12.13□□□□□ -0.47
HERPUD1-207ENST00000563781 CNKSR2Q8WXI2 1034 aa12.09□□□□□ -0.47
HERPUD1-207ENST00000563781 DMRT2Q9Y5R5 561 aa12.01□□□□□ -0.49
HERPUD1-207ENST00000563781 NPM3O75607 178 aaKnown RBP11.97□□□□□ -0.49
HERPUD1-207ENST00000563781 RNF216Q9NWF9 866 aaPredicted RBP11.84□□□□□ -0.51
HERPUD1-207ENST00000563781 HOXD11P31277 338 aaPredicted RBP11.79□□□□□ -0.52
HERPUD1-207ENST00000563781 SLC4A1APQ9BWU0 796 aaKnown RBP11.64□□□□□ -0.55
HERPUD1-207ENST00000563781 DNAJC5BQ9UF47 199 aa11.64□□□□□ -0.55
HERPUD1-207ENST00000563781 POTEDQ86YR6 584 aa11.58□□□□□ -0.56
HERPUD1-207ENST00000563781 DCAF8L1A6NGE4 600 aa11.44□□□□□ -0.58
HERPUD1-207ENST00000563781 EHMT2Q96KQ7 1210 aa11.36□□□□□ -0.59
HERPUD1-207ENST00000563781 SLC4A2P04920 1241 aa11.3□□□□□ -0.6
HERPUD1-207ENST00000563781 ZBTB22O15209 634 aa11.27□□□□□ -0.61
HERPUD1-207ENST00000563781 CSRNP3Q8WYN3 585 aa11.25□□□□□ -0.61
HERPUD1-207ENST00000563781 FOXD4L1Q9NU39 408 aa11.23□□□□□ -0.61
HERPUD1-207ENST00000563781 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.21□□□□□ -0.614e-6■□□□□ 11.1
HERPUD1-207ENST00000563781 U3KPZ7 1027 aaPredicted RBP11.05□□□□□ -0.64
HERPUD1-207ENST00000563781 MYCNP04198 464 aaPredicted RBP11.04□□□□□ -0.64
HERPUD1-207ENST00000563781 RNF39Q9H2S5 420 aa11□□□□□ -0.65
HERPUD1-207ENST00000563781 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.91□□□□□ -0.66
HERPUD1-207ENST00000563781 HNRNPUL2Q1KMD3 747 aaKnown RBP10.91□□□□□ -0.66
HERPUD1-207ENST00000563781 SAMD1Q6SPF0 538 aaPredicted RBP10.88□□□□□ -0.67
HERPUD1-207ENST00000563781 C1QBPQ07021 282 aaKnown RBP10.87□□□□□ -0.67
HERPUD1-207ENST00000563781 ATXN8OSP0DMR3 200 aa10.85□□□□□ -0.67
HERPUD1-207ENST00000563781 CCDC180Q9P1Z9 1646 aa10.84□□□□□ -0.67
HERPUD1-207ENST00000563781 APLP2Q06481 763 aa10.77□□□□□ -0.69
HERPUD1-207ENST00000563781 ATF5Q9Y2D1 282 aaPredicted RBP10.77□□□□□ -0.69
HERPUD1-207ENST00000563781 SPINK5Q9NQ38 1064 aaPredicted RBP10.72□□□□□ -0.69
HERPUD1-207ENST00000563781 CAPN15O75808 1086 aa10.65□□□□□ -0.7
HERPUD1-207ENST00000563781 CACNB1Q02641 598 aaPredicted RBP10.65□□□□□ -0.7
HERPUD1-207ENST00000563781 TRHP20396 242 aaPredicted RBP10.62□□□□□ -0.71
HERPUD1-207ENST00000563781 ZNF219Q9P2Y4 722 aaPredicted RBP10.61□□□□□ -0.71
HERPUD1-207ENST00000563781 DSG3P32926 999 aa10.49□□□□□ -0.73
HERPUD1-207ENST00000563781 ABCC9O60706 1549 aa10.48□□□□□ -0.73
HERPUD1-207ENST00000563781 POLA2Q14181 598 aa10.48□□□□□ -0.73
HERPUD1-207ENST00000563781 ABCB7O75027 752 aa10.46□□□□□ -0.73
HERPUD1-207ENST00000563781 ZCCHC6Q5VYS8 1495 aaKnown RBP10.32□□□□□ -0.76
HERPUD1-207ENST00000563781 MKRN4PQ13434 485 aaPredicted RBP10.3□□□□□ -0.76
HERPUD1-207ENST00000563781 ZBTB12Q9Y330 459 aaPredicted RBP10.29□□□□□ -0.76
HERPUD1-207ENST00000563781 FBLN2P98095 1184 aa10.27□□□□□ -0.77
HERPUD1-207ENST00000563781 DCAF1Q9Y4B6 1507 aa10.22□□□□□ -0.77
HERPUD1-207ENST00000563781 MYO15BQ96JP2 1530 aa10.19□□□□□ -0.78
HERPUD1-207ENST00000563781 NACADO15069 1562 aa10.18□□□□□ -0.78
HERPUD1-207ENST00000563781 DCAF8L2P0C7V8 631 aa10.17□□□□□ -0.78
HERPUD1-207ENST00000563781 FKBP8Q14318 412 aa10.14□□□□□ -0.79
HERPUD1-207ENST00000563781 RB1CC1Q8TDY2 1594 aa10.13□□□□□ -0.79
HERPUD1-207ENST00000563781 OSCARQ8IYS5 282 aa10.1□□□□□ -0.79
HERPUD1-207ENST00000563781 SPDYE4A6NLX3 237 aa10.08□□□□□ -0.8
HERPUD1-207ENST00000563781 SPDYE2BA6NHP3 402 aa10.04□□□□□ -0.8
HERPUD1-207ENST00000563781 SPDYE6P0CI01 402 aa10.04□□□□□ -0.8
HERPUD1-207ENST00000563781 SPDYE2Q495Y8 402 aa10.04□□□□□ -0.8
HERPUD1-207ENST00000563781 ZNF692Q9BU19 519 aaPredicted RBP10□□□□□ -0.81
HERPUD1-207ENST00000563781 SSUH2Q9Y2M2 353 aa9.97□□□□□ -0.81
HERPUD1-207ENST00000563781 RBM42Q9BTD8 480 aaKnown RBP9.96□□□□□ -0.82
HERPUD1-207ENST00000563781 PROM2Q8N271 834 aa9.95□□□□□ -0.82
HERPUD1-207ENST00000563781 SCRIBQ14160 1630 aa9.93□□□□□ -0.82
HERPUD1-207ENST00000563781 SLC24A1O60721 1099 aa9.91□□□□□ -0.82
HERPUD1-207ENST00000563781 AKT1S1Q96B36 256 aa9.88□□□□□ -0.83
HERPUD1-207ENST00000563781 PABPN1Q86U42 306 aaKnown RBP eCLIP9.87□□□□□ -0.83
HERPUD1-207ENST00000563781 BICRAQ9NZM4 1560 aa9.87□□□□□ -0.83
HERPUD1-207ENST00000563781 UNC13AQ9UPW8 1703 aa9.87□□□□□ -0.83
HERPUD1-207ENST00000563781 SHROOM4Q9ULL8 1493 aa9.84□□□□□ -0.83
HERPUD1-207ENST00000563781 REM2Q8IYK8 340 aaPredicted RBP9.79□□□□□ -0.84
HERPUD1-207ENST00000563781 FBXO3Q9UK99 471 aa9.76□□□□□ -0.85
HERPUD1-207ENST00000563781 STAG3Q9UJ98 1225 aa9.72□□□□□ -0.85
HERPUD1-207ENST00000563781 SPDYE1Q8NFV5 336 aaPredicted RBP9.71□□□□□ -0.86
HERPUD1-207ENST00000563781 PITPNM1O00562 1244 aa9.67□□□□□ -0.86
HERPUD1-207ENST00000563781 CLEC11AQ9Y240 323 aa9.66□□□□□ -0.86
HERPUD1-207ENST00000563781 VASPP50552 380 aaPredicted RBP9.64□□□□□ -0.87
HERPUD1-207ENST00000563781 AMER1Q5JTC6 1135 aaPredicted RBP9.64□□□□□ -0.87
HERPUD1-207ENST00000563781 CECR2Q9BXF3 1484 aa9.61□□□□□ -0.87
HERPUD1-207ENST00000563781 PRR29P0C7W0 189 aa9.6□□□□□ -0.87
HERPUD1-207ENST00000563781 RTN4Q9NQC3 1192 aaKnown RBP9.58□□□□□ -0.88
HERPUD1-207ENST00000563781 EIF4G1Q04637 1599 aaKnown RBP9.57□□□□□ -0.88
HERPUD1-207ENST00000563781 MIER1Q8N108 512 aa9.55□□□□□ -0.88
HERPUD1-207ENST00000563781 CHRDL2Q6WN34 429 aa9.54□□□□□ -0.88
HERPUD1-207ENST00000563781 PLCD3Q8N3E9 789 aa9.53□□□□□ -0.88
HERPUD1-207ENST00000563781 BAZ1AQ9NRL2 1556 aaPredicted RBP9.53□□□□□ -0.88
HERPUD1-207ENST00000563781 MROH2BQ7Z745 1585 aa9.52□□□□□ -0.89
HERPUD1-207ENST00000563781 IFNLR1Q8IU57 520 aaPredicted RBP9.52□□□□□ -0.89
HERPUD1-207ENST00000563781 SMARCA4P51532 1647 aa9.52□□□□□ -0.89
HERPUD1-207ENST00000563781 CREBZFQ9NS37 354 aa9.5□□□□□ -0.89
HERPUD1-207ENST00000563781 FXR2P51116 673 aaKnown RBP eCLIP9.49□□□□□ -0.89
HERPUD1-207ENST00000563781 RSF1Q96T23 1441 aaPredicted RBP9.48□□□□□ -0.89
HERPUD1-207ENST00000563781 CC2D2AQ9P2K1 1620 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms