RNA–Protein interactions for RNA: ENST00000625617.2

TUBB3-215, Transcript of tubulin beta 3 class III, humanhuman

TSL 4 BASIC

Gene TUBB3, Length 570 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-215ENST00000625617 NISCHQ9Y2I1 1504 aa36.38■■■■□ 3.41
TUBB3-215ENST00000625617 ABCC9O60706 1549 aa32.73■■■□□ 2.83
TUBB3-215ENST00000625617 CCDC180Q9P1Z9 1646 aa32.66■■■□□ 2.82
TUBB3-215ENST00000625617 RB1CC1Q8TDY2 1594 aa31.13■■■□□ 2.57
TUBB3-215ENST00000625617 NACADO15069 1562 aa30.91■■■□□ 2.54
TUBB3-215ENST00000625617 DCAF8L2P0C7V8 631 aa30.69■■■□□ 2.5
TUBB3-215ENST00000625617 DNAJC5BQ9UF47 199 aa30.68■■■□□ 2.5
TUBB3-215ENST00000625617 MYO15BQ96JP2 1530 aa30.48■■■□□ 2.47
TUBB3-215ENST00000625617 PABPN1Q86U42 306 aaKnown RBP eCLIP30.44■■■□□ 2.46
TUBB3-215ENST00000625617 UNC13AQ9UPW8 1703 aa30.3■■■□□ 2.44
TUBB3-215ENST00000625617 BICRAQ9NZM4 1560 aa30.2■■■□□ 2.42
TUBB3-215ENST00000625617 ZCCHC6Q5VYS8 1495 aaKnown RBP30.18■■■□□ 2.42
TUBB3-215ENST00000625617 DCAF1Q9Y4B6 1507 aa30.06■■■□□ 2.4
TUBB3-215ENST00000625617 SHROOM4Q9ULL8 1493 aa29.87■■■□□ 2.37
TUBB3-215ENST00000625617 SCRIBQ14160 1630 aa29.78■■■□□ 2.36
TUBB3-215ENST00000625617 CC2D2AQ9P2K1 1620 aa29.53■■■□□ 2.32
TUBB3-215ENST00000625617 CECR2Q9BXF3 1484 aa29.5■■■□□ 2.31
TUBB3-215ENST00000625617 EIF4G1Q04637 1599 aaKnown RBP29.48■■■□□ 2.31
TUBB3-215ENST00000625617 NCAPD3P42695 1498 aa28.53■■■□□ 2.16
TUBB3-215ENST00000625617 ATAD2BQ9ULI0 1458 aa28.45■■■□□ 2.14
TUBB3-215ENST00000625617 SMARCA4P51532 1647 aa28.39■■■□□ 2.13
TUBB3-215ENST00000625617 SMARCA2P51531 1590 aa28.38■■■□□ 2.13
TUBB3-215ENST00000625617 HMGXB3Q12766 1538 aa28.34■■■□□ 2.13
TUBB3-215ENST00000625617 ERCC6Q03468 1493 aa28.3■■■□□ 2.12
TUBB3-215ENST00000625617 BAZ1AQ9NRL2 1556 aaPredicted RBP28.27■■■□□ 2.12
TUBB3-215ENST00000625617 CUX2O14529 1486 aa28.26■■■□□ 2.11
TUBB3-215ENST00000625617 DNAJC5Q9H3Z4 198 aa28.23■■■□□ 2.11
TUBB3-215ENST00000625617 BAZ1BQ9UIG0 1483 aaKnown RBP28.19■■■□□ 2.1
TUBB3-215ENST00000625617 PEG3Q9GZU2 1588 aa28.12■■■□□ 2.09
TUBB3-215ENST00000625617 NESP48681 1621 aa28.08■■■□□ 2.09
TUBB3-215ENST00000625617 MROH2BQ7Z745 1585 aa28.03■■■□□ 2.08
TUBB3-215ENST00000625617 LAMC3Q9Y6N6 1575 aa27.9■■■□□ 2.06
TUBB3-215ENST00000625617 THOC2Q8NI27 1593 aaKnown RBP27.83■■■□□ 2.05
TUBB3-215ENST00000625617 PDS5BQ9NTI5 1447 aa27.76■■■□□ 2.04
TUBB3-215ENST00000625617 KIF21AQ7Z4S6 1674 aa27.68■■■□□ 2.02
TUBB3-215ENST00000625617 CADPSQ9ULU8 1353 aa27.67■■■□□ 2.02
TUBB3-215ENST00000625617 WIZO95785 1651 aa27.65■■■□□ 2.02
TUBB3-215ENST00000625617 MRC2Q9UBG0 1479 aa27.54■■■□□ 2
TUBB3-215ENST00000625617 WDR62O43379 1518 aa27.46■■□□□ 1.99
TUBB3-215ENST00000625617 RSF1Q96T23 1441 aaPredicted RBP27.43■■□□□ 1.98
TUBB3-215ENST00000625617 CEP164Q9UPV0 1460 aa27.42■■□□□ 1.98
TUBB3-215ENST00000625617 TOP2AP11388 1531 aaKnown RBP27.37■■□□□ 1.97
TUBB3-215ENST00000625617 FANCD2Q9BXW9 1451 aa27.37■■□□□ 1.97
TUBB3-215ENST00000625617 CFTRP13569 1480 aa27.35■■□□□ 1.97
TUBB3-215ENST00000625617 URB2Q14146 1524 aaKnown RBP27.13■■□□□ 1.93
TUBB3-215ENST00000625617 CCDC88BA6NC98 1476 aa27.02■■□□□ 1.92
TUBB3-215ENST00000625617 TRIM41Q8WV44 630 aa27.01■■□□□ 1.91
TUBB3-215ENST00000625617 PRDM2Q13029 1718 aa26.99■■□□□ 1.91
TUBB3-215ENST00000625617 OSCARQ8IYS5 282 aa26.91■■□□□ 1.9
TUBB3-215ENST00000625617 IFT140Q96RY7 1462 aa26.87■■□□□ 1.89
TUBB3-215ENST00000625617 TOPBP1Q92547 1522 aa26.84■■□□□ 1.89
TUBB3-215ENST00000625617 ZNF608Q9ULD9 1512 aaPredicted RBP26.8■■□□□ 1.88
TUBB3-215ENST00000625617 ABCC8Q09428 1581 aa26.77■■□□□ 1.88
TUBB3-215ENST00000625617 DNMBPQ6XZF7 1577 aa26.74■■□□□ 1.87
TUBB3-215ENST00000625617 EIF4G3O43432 1585 aaKnown RBP26.67■■□□□ 1.86
TUBB3-215ENST00000625617 TARBP1Q13395 1621 aaKnown RBP26.57■■□□□ 1.84
TUBB3-215ENST00000625617 POLA1P09884 1462 aaPredicted RBP26.56■■□□□ 1.84
TUBB3-215ENST00000625617 RIMBP3CA6NJZ7 1639 aa26.56■■□□□ 1.84
TUBB3-215ENST00000625617 RIMBP3BA6NNM3 1639 aa26.56■■□□□ 1.84
TUBB3-215ENST00000625617 RIMBP3Q9UFD9 1639 aa26.56■■□□□ 1.84
TUBB3-215ENST00000625617 AQRO60306 1485 aaKnown RBP eCLIP26.54■■□□□ 1.84
TUBB3-215ENST00000625617 ARHGEF11O15085 1522 aa26.51■■□□□ 1.83
TUBB3-215ENST00000625617 RAD54L2Q9Y4B4 1467 aa26.44■■□□□ 1.82
TUBB3-215ENST00000625617 SOGA1O94964 1423 aa26.42■■□□□ 1.82
TUBB3-215ENST00000625617 CHD1O14646 1710 aa26.4■■□□□ 1.82
TUBB3-215ENST00000625617 FGD5Q6ZNL6 1462 aa26.39■■□□□ 1.82
TUBB3-215ENST00000625617 TDRD9Q8NDG6 1382 aaKnown RBP26.38■■□□□ 1.81
TUBB3-215ENST00000625617 FBLN2P98095 1184 aa26.38■■□□□ 1.81
TUBB3-215ENST00000625617 CUX1P39880 1505 aa26.34■■□□□ 1.81
TUBB3-215ENST00000625617 WDR97A6NE52 1622 aa26.34■■□□□ 1.81
TUBB3-215ENST00000625617 SNAPC4Q5SXM2 1469 aa26.31■■□□□ 1.8
TUBB3-215ENST00000625617 CYB5RLQ6IPT4 315 aa26.28■■□□□ 1.8
TUBB3-215ENST00000625617 ARAP1Q96P48 1450 aa26.26■■□□□ 1.79
TUBB3-215ENST00000625617 MAGI1Q96QZ7 1491 aaPredicted RBP26.24■■□□□ 1.79
TUBB3-215ENST00000625617 GRIN2BQ13224 1484 aa26.23■■□□□ 1.79
TUBB3-215ENST00000625617 CHMP7Q8WUX9 453 aaPredicted RBP26.18■■□□□ 1.78
TUBB3-215ENST00000625617 SUPT5HO00267 1087 aaKnown RBP26.17■■□□□ 1.78
TUBB3-215ENST00000625617 CLASP1Q7Z460 1538 aa26.17■■□□□ 1.78
TUBB3-215ENST00000625617 SYNJ1O43426 1573 aa26.16■■□□□ 1.78
TUBB3-215ENST00000625617 SYNJ2O15056 1496 aa26.15■■□□□ 1.78
TUBB3-215ENST00000625617 GAPVD1Q14C86 1478 aa26.11■■□□□ 1.77
TUBB3-215ENST00000625617 ABCA10Q8WWZ4 1543 aa26.09■■□□□ 1.77
TUBB3-215ENST00000625617 PBRM1Q86U86 1689 aa26.06■■□□□ 1.76
TUBB3-215ENST00000625617 ABCA5Q8WWZ7 1642 aa26.05■■□□□ 1.76
TUBB3-215ENST00000625617 TRHP20396 242 aaPredicted RBP26.02■■□□□ 1.76
TUBB3-215ENST00000625617 WRNQ14191 1432 aaPredicted RBP eCLIP25.99■■□□□ 1.75
TUBB3-215ENST00000625617 TOP2BQ02880 1626 aa25.9■■□□□ 1.74
TUBB3-215ENST00000625617 GRIN2AQ12879 1464 aa25.89■■□□□ 1.73
TUBB3-215ENST00000625617 BIVM-ERCC5R4GMW8 1640 aa25.88■■□□□ 1.73
TUBB3-215ENST00000625617 ADAMTS12P58397 1594 aa25.88■■□□□ 1.73
TUBB3-215ENST00000625617 NUP160Q12769 1436 aa25.81■■□□□ 1.72
TUBB3-215ENST00000625617 FHAD1B1AJZ9 1412 aa25.8■■□□□ 1.72
TUBB3-215ENST00000625617 CEP170Q5SW79 1584 aa25.78■■□□□ 1.72
TUBB3-215ENST00000625617 ERICH3Q5RHP9 1530 aa25.76■■□□□ 1.71
TUBB3-215ENST00000625617 ERCC6L2Q5T890 1561 aa25.73■■□□□ 1.71
TUBB3-215ENST00000625617 SHROOM2Q13796 1616 aa25.66■■□□□ 1.7
TUBB3-215ENST00000625617 PRG4Q92954 1404 aaPredicted RBP25.55■■□□□ 1.68
TUBB3-215ENST00000625617 RUSC2Q8N2Y8 1516 aa25.52■■□□□ 1.68
TUBB3-215ENST00000625617 JPH4Q96JJ6 628 aa25.49■■□□□ 1.67
TUBB3-215ENST00000625617 KIF27Q86VH2 1401 aa25.44■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms