RNA–Protein interactions for RNA: ENST00000302445.7

KARS-201, Transcript of lysyl-tRNA synthetase, humanhuman

TSL 1 (best) BASIC

Gene KARS, Length 2,005 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARS-201ENST00000302445 AEBP2Q6ZN18 517 aaPredicted RBP27.72■■■□□ 2.03
KARS-201ENST00000302445 CHIC1Q5VXU3 224 aa27.57■■■□□ 2
KARS-201ENST00000302445 NISCHQ9Y2I1 1504 aa27.03■■□□□ 1.92
KARS-201ENST00000302445 PHF23Q9BUL5 403 aaPredicted RBP24.46■■□□□ 1.51
KARS-201ENST00000302445 HRCP23327 699 aa23.28■■□□□ 1.32
KARS-201ENST00000302445 SENP3Q9H4L4 574 aaPredicted RBP23.18■■□□□ 1.3
KARS-201ENST00000302445 SHROOM4Q9ULL8 1493 aa23.07■■□□□ 1.28
KARS-201ENST00000302445 ZCCHC6Q5VYS8 1495 aaKnown RBP23.04■■□□□ 1.28
KARS-201ENST00000302445 SUPT5HO00267 1087 aaKnown RBP22.94■■□□□ 1.26
KARS-201ENST00000302445 CCDC180Q9P1Z9 1646 aa22.91■■□□□ 1.26
KARS-201ENST00000302445 MYO15BQ96JP2 1530 aa22.89■■□□□ 1.25
KARS-201ENST00000302445 DCAF1Q9Y4B6 1507 aa22.77■■□□□ 1.24
KARS-201ENST00000302445 PCGF6Q9BYE7 350 aa22.62■■□□□ 1.21
KARS-201ENST00000302445 PLPPR3Q6T4P5 718 aa22.61■■□□□ 1.21
KARS-201ENST00000302445 PELP1Q8IZL8 1130 aaKnown RBP22.49■■□□□ 1.19
KARS-201ENST00000302445 PPARGC1BQ86YN6 1023 aaKnown RBP22.38■■□□□ 1.17
KARS-201ENST00000302445 TRIM26Q12899 539 aaPredicted RBP22.26■■□□□ 1.15
KARS-201ENST00000302445 ZEB1P37275 1124 aaPredicted RBP22.21■■□□□ 1.15
KARS-201ENST00000302445 LOC105371045A0A1W2PR82 267 aa21.95■■□□□ 1.1
KARS-201ENST00000302445 ABCC9O60706 1549 aa21.91■■□□□ 1.1
KARS-201ENST00000302445 SCAF1Q9H7N4 1312 aaKnown RBP21.74■■□□□ 1.07
KARS-201ENST00000302445 DCAF8L2P0C7V8 631 aa21.7■■□□□ 1.06
KARS-201ENST00000302445 MYT1Q01538 1121 aa21.7■■□□□ 1.06
KARS-201ENST00000302445 FOXD1Q16676 465 aa21.58■■□□□ 1.05
KARS-201ENST00000302445 RB1CC1Q8TDY2 1594 aa21.57■■□□□ 1.04
KARS-201ENST00000302445 RSF1Q96T23 1441 aaPredicted RBP21.54■■□□□ 1.04
KARS-201ENST00000302445 TRIM41Q8WV44 630 aa21.46■■□□□ 1.03
KARS-201ENST00000302445 ACIN1Q9UKV3 1341 aaKnown RBP21.42■■□□□ 1.02
KARS-201ENST00000302445 ADRA2BP18089 450 aa21.4■■□□□ 1.02
KARS-201ENST00000302445 PPP6R1Q9UPN7 881 aa21.39■■□□□ 1.01
KARS-201ENST00000302445 CENPBP07199 599 aaPredicted RBP21.28■■□□□ 1
KARS-201ENST00000302445 SCRIBQ14160 1630 aa21.25■□□□□ 0.99
KARS-201ENST00000302445 NEUROD1Q13562 356 aa21.2■□□□□ 0.98
KARS-201ENST00000302445 WRNQ14191 1432 aaPredicted RBP eCLIP21.11■□□□□ 0.97
KARS-201ENST00000302445 DIEXFQ68CQ4 756 aaKnown RBP21.09■□□□□ 0.97
KARS-201ENST00000302445 FAM9AQ8IZU1 332 aaPredicted RBP21.09■□□□□ 0.97
KARS-201ENST00000302445 CCER1Q8TC90 406 aaPredicted RBP21.09■□□□□ 0.97
KARS-201ENST00000302445 GTF3C3Q9Y5Q9 886 aa21.08■□□□□ 0.97
KARS-201ENST00000302445 EIF4G1Q04637 1599 aaKnown RBP21.08■□□□□ 0.96
KARS-201ENST00000302445 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21■□□□□ 0.95
KARS-201ENST00000302445 BAZ1AQ9NRL2 1556 aaPredicted RBP20.99■□□□□ 0.95
KARS-201ENST00000302445 MROH2BQ7Z745 1585 aa20.94■□□□□ 0.94
KARS-201ENST00000302445 NACADO15069 1562 aa20.93■□□□□ 0.94
KARS-201ENST00000302445 WIZO95785 1651 aa20.89■□□□□ 0.93
KARS-201ENST00000302445 CECR2Q9BXF3 1484 aa20.86■□□□□ 0.93
KARS-201ENST00000302445 ZNF316A6NFI3 1004 aaPredicted RBP20.82■□□□□ 0.92
KARS-201ENST00000302445 EEA1Q15075 1411 aa20.79■□□□□ 0.92
KARS-201ENST00000302445 CEP162Q5TB80 1403 aa20.78■□□□□ 0.92
KARS-201ENST00000302445 TNIKQ9UKE5 1360 aa20.78■□□□□ 0.92
KARS-201ENST00000302445 EHMT2Q96KQ7 1210 aa20.71■□□□□ 0.91
KARS-201ENST00000302445 TOP2AP11388 1531 aaKnown RBP20.7■□□□□ 0.9
KARS-201ENST00000302445 CLSPNQ9HAW4 1339 aa20.7■□□□□ 0.9
KARS-201ENST00000302445 CCDC88BA6NC98 1476 aa20.61■□□□□ 0.89
KARS-201ENST00000302445 ABCC8Q09428 1581 aa20.57■□□□□ 0.88
KARS-201ENST00000302445 GOLGA3Q08378 1498 aa20.57■□□□□ 0.88
KARS-201ENST00000302445 SMARCA2P51531 1590 aa20.56■□□□□ 0.88
KARS-201ENST00000302445 SMARCA4P51532 1647 aa20.49■□□□□ 0.87
KARS-201ENST00000302445 KIF21BO75037 1637 aa20.48■□□□□ 0.87
KARS-201ENST00000302445 KCNA4P22459 653 aa20.48■□□□□ 0.87
KARS-201ENST00000302445 MIER1Q8N108 512 aa20.48■□□□□ 0.87
KARS-201ENST00000302445 SOGA1O94964 1423 aa20.47■□□□□ 0.87
KARS-201ENST00000302445 PIAS4Q8N2W9 510 aaPredicted RBP20.46■□□□□ 0.87
KARS-201ENST00000302445 CSRNP3Q8WYN3 585 aa20.44■□□□□ 0.86
KARS-201ENST00000302445 YTHDC1Q96MU7 727 aaKnown RBP20.42■□□□□ 0.86
KARS-201ENST00000302445 CEP164Q9UPV0 1460 aa20.39■□□□□ 0.86
KARS-201ENST00000302445 TTBK1Q5TCY1 1321 aaPredicted RBP20.37■□□□□ 0.85
KARS-201ENST00000302445 BAZ1BQ9UIG0 1483 aaKnown RBP20.36■□□□□ 0.85
KARS-201ENST00000302445 VPS8Q8N3P4 1428 aa20.33■□□□□ 0.85
KARS-201ENST00000302445 UBTFP17480 764 aaKnown RBP20.3■□□□□ 0.84
KARS-201ENST00000302445 RUSC2Q8N2Y8 1516 aa20.3■□□□□ 0.84
KARS-201ENST00000302445 CLIP1P30622 1438 aa20.26■□□□□ 0.83
KARS-201ENST00000302445 SUPT16HQ9Y5B9 1047 aaKnown RBP20.22■□□□□ 0.83
KARS-201ENST00000302445 PEG3Q9GZU2 1588 aa20.18■□□□□ 0.82
KARS-201ENST00000302445 HNRNPUL2Q1KMD3 747 aaKnown RBP20.17■□□□□ 0.82
KARS-201ENST00000302445 UNC13AQ9UPW8 1703 aa20.14■□□□□ 0.81
KARS-201ENST00000302445 SYNJ1O43426 1573 aa20.13■□□□□ 0.81
KARS-201ENST00000302445 DHX57Q6P158 1386 aaKnown RBP20.12■□□□□ 0.81
KARS-201ENST00000302445 ANP32EQ9BTT0 268 aa20.12■□□□□ 0.81
KARS-201ENST00000302445 APLP2Q06481 763 aa20.1■□□□□ 0.81
KARS-201ENST00000302445 CUX2O14529 1486 aa20.09■□□□□ 0.81
KARS-201ENST00000302445 PPP4R3CPQ6ZMV5 832 aa20.08■□□□□ 0.8
KARS-201ENST00000302445 TSHZ2Q9NRE2 1034 aa20.06■□□□□ 0.8
KARS-201ENST00000302445 ERICH3Q5RHP9 1530 aa20.04■□□□□ 0.8
KARS-201ENST00000302445 RRBP1Q9P2E9 1410 aaKnown RBP20■□□□□ 0.79
KARS-201ENST00000302445 RAPGEF2Q9Y4G8 1499 aa20■□□□□ 0.79
KARS-201ENST00000302445 PABPN1Q86U42 306 aaKnown RBP eCLIP19.94■□□□□ 0.78
KARS-201ENST00000302445 TOP2BQ02880 1626 aa19.94■□□□□ 0.78
KARS-201ENST00000302445 BIVM-ERCC5R4GMW8 1640 aa19.92■□□□□ 0.78
KARS-201ENST00000302445 DNAJC5BQ9UF47 199 aa19.92■□□□□ 0.78
KARS-201ENST00000302445 ARAP1Q96P48 1450 aa19.89■□□□□ 0.78
KARS-201ENST00000302445 PRXQ9BXM0 1461 aa19.86■□□□□ 0.77
KARS-201ENST00000302445 BCL11AQ9H165 835 aa19.81■□□□□ 0.76
KARS-201ENST00000302445 CCNB3Q8WWL7 1395 aa19.77■□□□□ 0.76
KARS-201ENST00000302445 BICRAQ9NZM4 1560 aa19.77■□□□□ 0.75
KARS-201ENST00000302445 MAP3K1Q13233 1512 aa19.76■□□□□ 0.75
KARS-201ENST00000302445 MAPKBP1O60336 1514 aa19.75■□□□□ 0.75
KARS-201ENST00000302445 ATAD2BQ9ULI0 1458 aa19.72■□□□□ 0.75
KARS-201ENST00000302445 TIMELESSQ9UNS1 1208 aa19.68■□□□□ 0.74
KARS-201ENST00000302445 CCER2I3L3R5 266 aa19.66■□□□□ 0.74
KARS-201ENST00000302445 KANK4Q5T7N3 995 aaPredicted RBP19.66■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms