RNA–Protein interactions for RNA: ENST00000532054.1

EIF3M-211, Transcript of eukaryotic translation initiation factor 3 subunit M, humanhuman

TSL 2

Gene EIF3M, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EIF3M-211ENST00000532054 NISCHQ9Y2I1 1504 aa38.9■■■■□ 3.82
EIF3M-211ENST00000532054 ABCC9O60706 1549 aa36.13■■■■□ 3.38
EIF3M-211ENST00000532054 CCDC180Q9P1Z9 1646 aa35.13■■■■□ 3.21
EIF3M-211ENST00000532054 DNAJC5BQ9UF47 199 aa34.86■■■■□ 3.17
EIF3M-211ENST00000532054 RB1CC1Q8TDY2 1594 aa33.94■■■■□ 3.02
EIF3M-211ENST00000532054 PABPN1Q86U42 306 aaKnown RBP eCLIP33.61■■■□□ 2.97
EIF3M-211ENST00000532054 NACADO15069 1562 aa33.52■■■□□ 2.96
EIF3M-211ENST00000532054 DCAF8L2P0C7V8 631 aa33.33■■■□□ 2.93
EIF3M-211ENST00000532054 UNC13AQ9UPW8 1703 aa33.05■■■□□ 2.88
EIF3M-211ENST00000532054 BICRAQ9NZM4 1560 aa33.04■■■□□ 2.88
EIF3M-211ENST00000532054 MYO15BQ96JP2 1530 aa32.82■■■□□ 2.84
EIF3M-211ENST00000532054 ZCCHC6Q5VYS8 1495 aaKnown RBP32.66■■■□□ 2.82
EIF3M-211ENST00000532054 CECR2Q9BXF3 1484 aa32.65■■■□□ 2.82
EIF3M-211ENST00000532054 DNAJC5Q9H3Z4 198 aa32.63■■■□□ 2.81
EIF3M-211ENST00000532054 CC2D2AQ9P2K1 1620 aa32.55■■■□□ 2.8
EIF3M-211ENST00000532054 SHROOM4Q9ULL8 1493 aa32.46■■■□□ 2.79
EIF3M-211ENST00000532054 DCAF1Q9Y4B6 1507 aa32.27■■■□□ 2.76
EIF3M-211ENST00000532054 EIF4G1Q04637 1599 aaKnown RBP32.27■■■□□ 2.76
EIF3M-211ENST00000532054 SCRIBQ14160 1630 aa31.99■■■□□ 2.71
EIF3M-211ENST00000532054 CUX2O14529 1486 aa31.48■■■□□ 2.63
EIF3M-211ENST00000532054 ERCC6Q03468 1493 aa31.21■■■□□ 2.59
EIF3M-211ENST00000532054 NCAPD3P42695 1498 aa31.06■■■□□ 2.56
EIF3M-211ENST00000532054 ATAD2BQ9ULI0 1458 aa30.81■■■□□ 2.52
EIF3M-211ENST00000532054 NESP48681 1621 aa30.8■■■□□ 2.52
EIF3M-211ENST00000532054 TRIM41Q8WV44 630 aa30.75■■■□□ 2.51
EIF3M-211ENST00000532054 HMGXB3Q12766 1538 aa30.63■■■□□ 2.49
EIF3M-211ENST00000532054 SMARCA2P51531 1590 aa30.6■■■□□ 2.49
EIF3M-211ENST00000532054 THOC2Q8NI27 1593 aaKnown RBP30.55■■■□□ 2.48
EIF3M-211ENST00000532054 SMARCA4P51532 1647 aa30.45■■■□□ 2.47
EIF3M-211ENST00000532054 BAZ1BQ9UIG0 1483 aaKnown RBP30.4■■■□□ 2.46
EIF3M-211ENST00000532054 LAMC3Q9Y6N6 1575 aa30.38■■■□□ 2.45
EIF3M-211ENST00000532054 PDS5BQ9NTI5 1447 aa30.32■■■□□ 2.44
EIF3M-211ENST00000532054 KIF21AQ7Z4S6 1674 aa30.22■■■□□ 2.43
EIF3M-211ENST00000532054 PEG3Q9GZU2 1588 aa30.2■■■□□ 2.43
EIF3M-211ENST00000532054 BAZ1AQ9NRL2 1556 aaPredicted RBP30.2■■■□□ 2.43
EIF3M-211ENST00000532054 SUPT5HO00267 1087 aaKnown RBP30.14■■■□□ 2.42
EIF3M-211ENST00000532054 RSF1Q96T23 1441 aaPredicted RBP30.09■■■□□ 2.41
EIF3M-211ENST00000532054 CADPSQ9ULU8 1353 aa30.08■■■□□ 2.41
EIF3M-211ENST00000532054 MRC2Q9UBG0 1479 aa30.05■■■□□ 2.4
EIF3M-211ENST00000532054 OSCARQ8IYS5 282 aa30.04■■■□□ 2.4
EIF3M-211ENST00000532054 MROH2BQ7Z745 1585 aa29.98■■■□□ 2.39
EIF3M-211ENST00000532054 WDR62O43379 1518 aa29.98■■■□□ 2.39
EIF3M-211ENST00000532054 CEP164Q9UPV0 1460 aa29.74■■■□□ 2.35
EIF3M-211ENST00000532054 WIZO95785 1651 aa29.7■■■□□ 2.35
EIF3M-211ENST00000532054 FANCD2Q9BXW9 1451 aa29.68■■■□□ 2.34
EIF3M-211ENST00000532054 RIMBP3CA6NJZ7 1639 aa29.56■■■□□ 2.32
EIF3M-211ENST00000532054 RIMBP3BA6NNM3 1639 aa29.56■■■□□ 2.32
EIF3M-211ENST00000532054 RIMBP3Q9UFD9 1639 aa29.56■■■□□ 2.32
EIF3M-211ENST00000532054 CFTRP13569 1480 aa29.52■■■□□ 2.32
EIF3M-211ENST00000532054 URB2Q14146 1524 aaKnown RBP29.49■■■□□ 2.31
EIF3M-211ENST00000532054 TOP2AP11388 1531 aaKnown RBP29.48■■■□□ 2.31
EIF3M-211ENST00000532054 ARHGEF11O15085 1522 aa29.41■■■□□ 2.3
EIF3M-211ENST00000532054 CYB5RLQ6IPT4 315 aa29.39■■■□□ 2.3
EIF3M-211ENST00000532054 TRHP20396 242 aaPredicted RBP29.3■■■□□ 2.28
EIF3M-211ENST00000532054 ZNF608Q9ULD9 1512 aaPredicted RBP29.29■■■□□ 2.28
EIF3M-211ENST00000532054 IFT140Q96RY7 1462 aa29.22■■■□□ 2.27
EIF3M-211ENST00000532054 CCDC88BA6NC98 1476 aa29.13■■■□□ 2.25
EIF3M-211ENST00000532054 AEBP2Q6ZN18 517 aaPredicted RBP29.08■■■□□ 2.25
EIF3M-211ENST00000532054 ARAP1Q96P48 1450 aa29.08■■■□□ 2.25
EIF3M-211ENST00000532054 TOPBP1Q92547 1522 aa29■■■□□ 2.23
EIF3M-211ENST00000532054 FBLN2P98095 1184 aa28.95■■■□□ 2.22
EIF3M-211ENST00000532054 EIF4G3O43432 1585 aaKnown RBP28.95■■■□□ 2.22
EIF3M-211ENST00000532054 AQRO60306 1485 aaKnown RBP eCLIP28.94■■■□□ 2.22
EIF3M-211ENST00000532054 ABCC8Q09428 1581 aa28.9■■■□□ 2.22
EIF3M-211ENST00000532054 CHIC1Q5VXU3 224 aa28.9■■■□□ 2.22
EIF3M-211ENST00000532054 PRDM2Q13029 1718 aa28.88■■■□□ 2.21
EIF3M-211ENST00000532054 CHD1O14646 1710 aa28.86■■■□□ 2.21
EIF3M-211ENST00000532054 TARBP1Q13395 1621 aaKnown RBP28.79■■■□□ 2.2
EIF3M-211ENST00000532054 DNMBPQ6XZF7 1577 aa28.76■■■□□ 2.19
EIF3M-211ENST00000532054 POLA1P09884 1462 aaPredicted RBP28.66■■■□□ 2.18
EIF3M-211ENST00000532054 TDRD9Q8NDG6 1382 aaKnown RBP28.65■■■□□ 2.18
EIF3M-211ENST00000532054 CLASP1Q7Z460 1538 aa28.61■■■□□ 2.17
EIF3M-211ENST00000532054 CHMP7Q8WUX9 453 aaPredicted RBP28.61■■■□□ 2.17
EIF3M-211ENST00000532054 RAD54L2Q9Y4B4 1467 aa28.6■■■□□ 2.17
EIF3M-211ENST00000532054 SOGA1O94964 1423 aa28.58■■■□□ 2.17
EIF3M-211ENST00000532054 SNAPC4Q5SXM2 1469 aa28.53■■■□□ 2.16
EIF3M-211ENST00000532054 SYNJ1O43426 1573 aa28.48■■■□□ 2.15
EIF3M-211ENST00000532054 MAGI1Q96QZ7 1491 aaPredicted RBP28.44■■■□□ 2.14
EIF3M-211ENST00000532054 GAPVD1Q14C86 1478 aa28.42■■■□□ 2.14
EIF3M-211ENST00000532054 GRIN2BQ13224 1484 aa28.38■■■□□ 2.13
EIF3M-211ENST00000532054 WDR97A6NE52 1622 aa28.37■■■□□ 2.13
EIF3M-211ENST00000532054 SYNJ2O15056 1496 aa28.37■■■□□ 2.13
EIF3M-211ENST00000532054 FGD5Q6ZNL6 1462 aa28.34■■■□□ 2.13
EIF3M-211ENST00000532054 WRNQ14191 1432 aaPredicted RBP eCLIP28.31■■■□□ 2.12
EIF3M-211ENST00000532054 CUX1P39880 1505 aa28.18■■■□□ 2.1
EIF3M-211ENST00000532054 TOP2BQ02880 1626 aa28.14■■■□□ 2.09
EIF3M-211ENST00000532054 ERCC6L2Q5T890 1561 aa28.13■■■□□ 2.09
EIF3M-211ENST00000532054 BIVM-ERCC5R4GMW8 1640 aa28.12■■■□□ 2.09
EIF3M-211ENST00000532054 PBRM1Q86U86 1689 aa28.03■■■□□ 2.08
EIF3M-211ENST00000532054 ABCA10Q8WWZ4 1543 aa27.99■■■□□ 2.07
EIF3M-211ENST00000532054 GRIN2AQ12879 1464 aa27.99■■■□□ 2.07
EIF3M-211ENST00000532054 CEP170Q5SW79 1584 aa27.99■■■□□ 2.07
EIF3M-211ENST00000532054 NUP160Q12769 1436 aa27.96■■■□□ 2.07
EIF3M-211ENST00000532054 ILDR1Q86SU0 546 aaPredicted RBP27.96■■■□□ 2.07
EIF3M-211ENST00000532054 ABCA5Q8WWZ7 1642 aa27.94■■■□□ 2.06
EIF3M-211ENST00000532054 KDM4FA0A1W2PPD8 638 aa27.92■■■□□ 2.06
EIF3M-211ENST00000532054 KIF13AQ9H1H9 1805 aa27.91■■■□□ 2.06
EIF3M-211ENST00000532054 EEA1Q15075 1411 aa27.91■■■□□ 2.06
EIF3M-211ENST00000532054 FAM69CQ0P6D2 419 aa27.89■■■□□ 2.06
EIF3M-211ENST00000532054 SHROOM2Q13796 1616 aa27.85■■■□□ 2.05
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms