RNA–Protein interactions for RNA: ENST00000216044.9

GTPBP1-201, Transcript of GTP binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTPBP1, Length 5,126 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTPBP1-201ENST00000216044 NISCHQ9Y2I1 1504 aa28.68■■■□□ 2.18
GTPBP1-201ENST00000216044 DCAF8L2P0C7V8 631 aa26.18■■□□□ 1.78
GTPBP1-201ENST00000216044 SHROOM4Q9ULL8 1493 aa25.08■■□□□ 1.61
GTPBP1-201ENST00000216044 SUPT5HO00267 1087 aaKnown RBP24.71■■□□□ 1.55
GTPBP1-201ENST00000216044 CCDC180Q9P1Z9 1646 aa24.4■■□□□ 1.5
GTPBP1-201ENST00000216044 ABCC9O60706 1549 aa24.22■■□□□ 1.47
GTPBP1-201ENST00000216044 ZCCHC6Q5VYS8 1495 aaKnown RBP23.92■■□□□ 1.42
GTPBP1-201ENST00000216044 PELP1Q8IZL8 1130 aaKnown RBP23.46■■□□□ 1.35
GTPBP1-201ENST00000216044 PABPN1Q86U42 306 aaKnown RBP eCLIP23.36■■□□□ 1.33
GTPBP1-201ENST00000216044 SCRIBQ14160 1630 aa23.32■■□□□ 1.32
GTPBP1-201ENST00000216044 DCAF1Q9Y4B6 1507 aa23.24■■□□□ 1.31
GTPBP1-201ENST00000216044 NACADO15069 1562 aa23.22■■□□□ 1.31
GTPBP1-201ENST00000216044 RB1CC1Q8TDY2 1594 aa23.21■■□□□ 1.31
GTPBP1-201ENST00000216044 TRIM41Q8WV44 630 aa23.12■■□□□ 1.29
GTPBP1-201ENST00000216044 EHMT2Q96KQ7 1210 aa23.09■■□□□ 1.29
GTPBP1-201ENST00000216044 FAM9AQ8IZU1 332 aaPredicted RBP23.03■■□□□ 1.28
GTPBP1-201ENST00000216044 MYO15BQ96JP2 1530 aa22.83■■□□□ 1.24
GTPBP1-201ENST00000216044 CHIC1Q5VXU3 224 aa22.81■■□□□ 1.24
GTPBP1-201ENST00000216044 RSF1Q96T23 1441 aaPredicted RBP22.53■■□□□ 1.2
GTPBP1-201ENST00000216044 APLP2Q06481 763 aa22.48■■□□□ 1.19
GTPBP1-201ENST00000216044 UBTFP17480 764 aaKnown RBP22.47■■□□□ 1.19
GTPBP1-201ENST00000216044 RANGAP1P46060 587 aaPredicted RBP22.38■■□□□ 1.17
GTPBP1-201ENST00000216044 CECR2Q9BXF3 1484 aa22.37■■□□□ 1.17
GTPBP1-201ENST00000216044 BAZ1AQ9NRL2 1556 aaPredicted RBP22.36■■□□□ 1.17
GTPBP1-201ENST00000216044 CCER1Q8TC90 406 aaPredicted RBP22.36■■□□□ 1.17
GTPBP1-201ENST00000216044 LOC105371045A0A1W2PR82 267 aa22.28■■□□□ 1.16
GTPBP1-201ENST00000216044 ERICH6Q7L0X2 663 aa22.23■■□□□ 1.15
GTPBP1-201ENST00000216044 TTBK1Q5TCY1 1321 aaPredicted RBP22.17■■□□□ 1.14
GTPBP1-201ENST00000216044 MROH2BQ7Z745 1585 aa22.16■■□□□ 1.14
GTPBP1-201ENST00000216044 BAZ1BQ9UIG0 1483 aaKnown RBP22.14■■□□□ 1.14
GTPBP1-201ENST00000216044 PCGF6Q9BYE7 350 aa22.12■■□□□ 1.13
GTPBP1-201ENST00000216044 MYT1Q01538 1121 aa22.06■■□□□ 1.12
GTPBP1-201ENST00000216044 ATP1B4Q9UN42 357 aaPredicted RBP22.02■■□□□ 1.12
GTPBP1-201ENST00000216044 CENPBP07199 599 aaPredicted RBP21.97■■□□□ 1.11
GTPBP1-201ENST00000216044 SMARCA2P51531 1590 aa21.92■■□□□ 1.1
GTPBP1-201ENST00000216044 WIZO95785 1651 aa21.9■■□□□ 1.1
GTPBP1-201ENST00000216044 SMARCA4P51532 1647 aa21.88■■□□□ 1.09
GTPBP1-201ENST00000216044 CSRNP3Q8WYN3 585 aa21.87■■□□□ 1.09
GTPBP1-201ENST00000216044 PPARGC1BQ86YN6 1023 aaKnown RBP21.85■■□□□ 1.09
GTPBP1-201ENST00000216044 TOP2AP11388 1531 aaKnown RBP21.81■■□□□ 1.08
GTPBP1-201ENST00000216044 CCDC88BA6NC98 1476 aa21.79■■□□□ 1.08
GTPBP1-201ENST00000216044 ZEB1P37275 1124 aaPredicted RBP21.76■■□□□ 1.07
GTPBP1-201ENST00000216044 TRIM26Q12899 539 aaPredicted RBP21.75■■□□□ 1.07
GTPBP1-201ENST00000216044 ATAD2BQ9ULI0 1458 aa21.75■■□□□ 1.07
GTPBP1-201ENST00000216044 WRNQ14191 1432 aaPredicted RBP eCLIP21.72■■□□□ 1.07
GTPBP1-201ENST00000216044 NEFLP07196 543 aa21.62■■□□□ 1.05
GTPBP1-201ENST00000216044 BICRAQ9NZM4 1560 aa21.55■■□□□ 1.04
GTPBP1-201ENST00000216044 EEA1Q15075 1411 aa21.54■■□□□ 1.04
GTPBP1-201ENST00000216044 EIF4G1Q04637 1599 aaKnown RBP21.52■■□□□ 1.04
GTPBP1-201ENST00000216044 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.52■■□□□ 1.04
GTPBP1-201ENST00000216044 HNRNPUL2Q1KMD3 747 aaKnown RBP21.52■■□□□ 1.04
GTPBP1-201ENST00000216044 FBLN2P98095 1184 aa21.5■■□□□ 1.03
GTPBP1-201ENST00000216044 ABCC8Q09428 1581 aa21.43■■□□□ 1.02
GTPBP1-201ENST00000216044 NCAPD3P42695 1498 aa21.43■■□□□ 1.02
GTPBP1-201ENST00000216044 UNC13AQ9UPW8 1703 aa21.42■■□□□ 1.02
GTPBP1-201ENST00000216044 CADPSQ9ULU8 1353 aa21.39■■□□□ 1.01
GTPBP1-201ENST00000216044 KIF27Q86VH2 1401 aa21.38■■□□□ 1.01
GTPBP1-201ENST00000216044 YTHDC1Q96MU7 727 aaKnown RBP21.35■■□□□ 1.01
GTPBP1-201ENST00000216044 ITGAEP38570 1179 aa21.34■■□□□ 1.01
GTPBP1-201ENST00000216044 P3H3Q8IVL6 736 aa21.34■■□□□ 1.01
GTPBP1-201ENST00000216044 GOLGA3Q08378 1498 aa21.33■■□□□ 1.01
GTPBP1-201ENST00000216044 ERCC6Q03468 1493 aa21.32■■□□□ 1
GTPBP1-201ENST00000216044 PDS5BQ9NTI5 1447 aa21.32■■□□□ 1
GTPBP1-201ENST00000216044 SOGA1O94964 1423 aa21.28■■□□□ 1
GTPBP1-201ENST00000216044 CEP164Q9UPV0 1460 aa21.26■□□□□ 0.99
GTPBP1-201ENST00000216044 DAXXQ9UER7 740 aaPredicted RBP21.22■□□□□ 0.99
GTPBP1-201ENST00000216044 HMGXB3Q12766 1538 aa21.21■□□□□ 0.99
GTPBP1-201ENST00000216044 CLIP1P30622 1438 aa21.2■□□□□ 0.98
GTPBP1-201ENST00000216044 CC2D2AQ9P2K1 1620 aa21.19■□□□□ 0.98
GTPBP1-201ENST00000216044 CUX2O14529 1486 aa21.19■□□□□ 0.98
GTPBP1-201ENST00000216044 TNIKQ9UKE5 1360 aa21.19■□□□□ 0.98
GTPBP1-201ENST00000216044 CEP162Q5TB80 1403 aa21.17■□□□□ 0.98
GTPBP1-201ENST00000216044 FAM50AQ14320 339 aaKnown RBP21.15■□□□□ 0.98
GTPBP1-201ENST00000216044 CHMP7Q8WUX9 453 aaPredicted RBP21.14■□□□□ 0.98
GTPBP1-201ENST00000216044 HRCP23327 699 aa21.14■□□□□ 0.97
GTPBP1-201ENST00000216044 FANCD2Q9BXW9 1451 aa21.12■□□□□ 0.97
GTPBP1-201ENST00000216044 PEG3Q9GZU2 1588 aa21.07■□□□□ 0.96
GTPBP1-201ENST00000216044 CARMIL1Q5VZK9 1371 aa21.05■□□□□ 0.96
GTPBP1-201ENST00000216044 ARID3CA6NKF2 412 aa21.04■□□□□ 0.96
GTPBP1-201ENST00000216044 CFTRP13569 1480 aa21.02■□□□□ 0.96
GTPBP1-201ENST00000216044 MYT1LQ9UL68 1186 aa20.98■□□□□ 0.95
GTPBP1-201ENST00000216044 CDK11AQ9UQ88 783 aaPredicted RBP20.98■□□□□ 0.95
GTPBP1-201ENST00000216044 TDRD9Q8NDG6 1382 aaKnown RBP20.95■□□□□ 0.94
GTPBP1-201ENST00000216044 RUSC2Q8N2Y8 1516 aa20.89■□□□□ 0.94
GTPBP1-201ENST00000216044 FGD5Q6ZNL6 1462 aa20.86■□□□□ 0.93
GTPBP1-201ENST00000216044 NESP48681 1621 aa20.84■□□□□ 0.93
GTPBP1-201ENST00000216044 SYNJ1O43426 1573 aa20.81■□□□□ 0.92
GTPBP1-201ENST00000216044 MTUS2Q5JR59 1369 aa20.8■□□□□ 0.92
GTPBP1-201ENST00000216044 RAPGEF2Q9Y4G8 1499 aa20.8■□□□□ 0.92
GTPBP1-201ENST00000216044 TRIM52Q96A61 297 aa20.78■□□□□ 0.92
GTPBP1-201ENST00000216044 ZNF777Q9ULD5 760 aaPredicted RBP20.74■□□□□ 0.91
GTPBP1-201ENST00000216044 RAD54L2Q9Y4B4 1467 aa20.73■□□□□ 0.91
GTPBP1-201ENST00000216044 FHAD1B1AJZ9 1412 aa20.73■□□□□ 0.91
GTPBP1-201ENST00000216044 TOP2BQ02880 1626 aa20.72■□□□□ 0.91
GTPBP1-201ENST00000216044 VPS8Q8N3P4 1428 aa20.71■□□□□ 0.91
GTPBP1-201ENST00000216044 DNAJC5BQ9UF47 199 aa20.7■□□□□ 0.9
GTPBP1-201ENST00000216044 CUX1P39880 1505 aa20.7■□□□□ 0.9
GTPBP1-201ENST00000216044 RTL5Q5HYW3 569 aaPredicted RBP20.69■□□□□ 0.9
GTPBP1-201ENST00000216044 IGF1RP08069 1367 aa20.68■□□□□ 0.9
GTPBP1-201ENST00000216044 LAMC3Q9Y6N6 1575 aa20.67■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms