RNA–Protein interactions for RNA: ENST00000530445.5

EEF1D-232, Transcript of eukaryotic translation elongation factor 1 delta, humanhuman

TSL 2

Gene EEF1D, Length 1,217 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EEF1D-232ENST00000530445 AEBP2Q6ZN18 517 aaPredicted RBP42.36■■■■■ 4.37
EEF1D-232ENST00000530445 CHIC1Q5VXU3 224 aa40.93■■■■■ 4.14
EEF1D-232ENST00000530445 NISCHQ9Y2I1 1504 aa36.59■■■■□ 3.45
EEF1D-232ENST00000530445 SENP3Q9H4L4 574 aaPredicted RBP36.12■■■■□ 3.37
EEF1D-232ENST00000530445 PHF23Q9BUL5 403 aaPredicted RBP35.89■■■■□ 3.34
EEF1D-232ENST00000530445 FOXD1Q16676 465 aa33.53■■■□□ 2.96
EEF1D-232ENST00000530445 PLPPR3Q6T4P5 718 aa33.05■■■□□ 2.88
EEF1D-232ENST00000530445 CCDC180Q9P1Z9 1646 aa32.74■■■□□ 2.83
EEF1D-232ENST00000530445 ABCC9O60706 1549 aa32.61■■■□□ 2.81
EEF1D-232ENST00000530445 PPP6R1Q9UPN7 881 aa31.85■■■□□ 2.69
EEF1D-232ENST00000530445 ADRA2BP18089 450 aa31.81■■■□□ 2.68
EEF1D-232ENST00000530445 PIAS4Q8N2W9 510 aaPredicted RBP31.52■■■□□ 2.64
EEF1D-232ENST00000530445 MSH5O43196 834 aa31.19■■■□□ 2.58
EEF1D-232ENST00000530445 RB1CC1Q8TDY2 1594 aa31.05■■■□□ 2.56
EEF1D-232ENST00000530445 NACADO15069 1562 aa30.86■■■□□ 2.53
EEF1D-232ENST00000530445 DCAF8L2P0C7V8 631 aa30.84■■■□□ 2.53
EEF1D-232ENST00000530445 UNC13AQ9UPW8 1703 aa30.48■■■□□ 2.47
EEF1D-232ENST00000530445 MYO15BQ96JP2 1530 aa30.44■■■□□ 2.46
EEF1D-232ENST00000530445 DNAJC5BQ9UF47 199 aa30.41■■■□□ 2.46
EEF1D-232ENST00000530445 PABPN1Q86U42 306 aaKnown RBP eCLIP30.4■■■□□ 2.462e-7■■□□□ 14
EEF1D-232ENST00000530445 ZCCHC6Q5VYS8 1495 aaKnown RBP30.38■■■□□ 2.45
EEF1D-232ENST00000530445 BICRAQ9NZM4 1560 aa30.21■■■□□ 2.43
EEF1D-232ENST00000530445 DCAF1Q9Y4B6 1507 aa30.16■■■□□ 2.42
EEF1D-232ENST00000530445 SCRIBQ14160 1630 aa29.96■■■□□ 2.39
EEF1D-232ENST00000530445 SHROOM4Q9ULL8 1493 aa29.66■■■□□ 2.34
EEF1D-232ENST00000530445 CC2D2AQ9P2K1 1620 aa29.45■■■□□ 2.31
EEF1D-232ENST00000530445 EIF4G1Q04637 1599 aaKnown RBP29.43■■■□□ 2.3
EEF1D-232ENST00000530445 CECR2Q9BXF3 1484 aa29.3■■■□□ 2.28
EEF1D-232ENST00000530445 POTEDQ86YR6 584 aa29.25■■■□□ 2.27
EEF1D-232ENST00000530445 SCAF1Q9H7N4 1312 aaKnown RBP29.23■■■□□ 2.27
EEF1D-232ENST00000530445 PPP4R3CPQ6ZMV5 832 aa29.03■■■□□ 2.24
EEF1D-232ENST00000530445 MAPK8IP2Q13387 824 aaPredicted RBP29.01■■■□□ 2.23
EEF1D-232ENST00000530445 DMRT2Q9Y5R5 561 aa28.72■■■□□ 2.19
EEF1D-232ENST00000530445 SMARCA4P51532 1647 aa28.54■■■□□ 2.16
EEF1D-232ENST00000530445 NCAPD3P42695 1498 aa28.47■■■□□ 2.15
EEF1D-232ENST00000530445 ATAD2BQ9ULI0 1458 aa28.46■■■□□ 2.15
EEF1D-232ENST00000530445 SMARCA2P51531 1590 aa28.37■■■□□ 2.13
EEF1D-232ENST00000530445 BAZ1AQ9NRL2 1556 aaPredicted RBP28.37■■■□□ 2.13
EEF1D-232ENST00000530445 CNKSR2Q8WXI2 1034 aa28.36■■■□□ 2.13
EEF1D-232ENST00000530445 HMGXB3Q12766 1538 aa28.32■■■□□ 2.12
EEF1D-232ENST00000530445 MROH2BQ7Z745 1585 aa28.25■■■□□ 2.11
EEF1D-232ENST00000530445 BAZ1BQ9UIG0 1483 aaKnown RBP28.22■■■□□ 2.11
EEF1D-232ENST00000530445 NCBP3Q53F19 620 aaKnown RBP28.19■■■□□ 2.1
EEF1D-232ENST00000530445 PEG3Q9GZU2 1588 aa28.18■■■□□ 2.1
EEF1D-232ENST00000530445 NESP48681 1621 aa28.1■■■□□ 2.09
EEF1D-232ENST00000530445 ERCC6Q03468 1493 aa28.1■■■□□ 2.09
EEF1D-232ENST00000530445 WIZO95785 1651 aa27.96■■■□□ 2.07
EEF1D-232ENST00000530445 HOXD11P31277 338 aaPredicted RBP27.93■■■□□ 2.06
EEF1D-232ENST00000530445 RNF216Q9NWF9 866 aaPredicted RBP27.93■■■□□ 2.06
EEF1D-232ENST00000530445 CUX2O14529 1486 aa27.91■■■□□ 2.06
EEF1D-232ENST00000530445 LAMC3Q9Y6N6 1575 aa27.83■■■□□ 2.05
EEF1D-232ENST00000530445 KIF21AQ7Z4S6 1674 aa27.76■■■□□ 2.03
EEF1D-232ENST00000530445 THOC2Q8NI27 1593 aaKnown RBP27.74■■■□□ 2.03
EEF1D-232ENST00000530445 KCNA4P22459 653 aa27.73■■■□□ 2.03
EEF1D-232ENST00000530445 RSF1Q96T23 1441 aaPredicted RBP27.7■■■□□ 2.03
EEF1D-232ENST00000530445 NPM3O75607 178 aaKnown RBP27.68■■■□□ 2.02
EEF1D-232ENST00000530445 DNAJC5Q9H3Z4 198 aa27.67■■■□□ 2.02
EEF1D-232ENST00000530445 CADPSQ9ULU8 1353 aa27.63■■■□□ 2.01
EEF1D-232ENST00000530445 PDS5BQ9NTI5 1447 aa27.63■■■□□ 2.01
EEF1D-232ENST00000530445 TOP2AP11388 1531 aaKnown RBP27.55■■■□□ 2
EEF1D-232ENST00000530445 DCAF8L1A6NGE4 600 aa27.54■■■□□ 2
EEF1D-232ENST00000530445 MRC2Q9UBG0 1479 aa27.44■■□□□ 1.98
EEF1D-232ENST00000530445 CFTRP13569 1480 aa27.38■■□□□ 1.97
EEF1D-232ENST00000530445 FANCD2Q9BXW9 1451 aa27.38■■□□□ 1.97
EEF1D-232ENST00000530445 CEP164Q9UPV0 1460 aa27.38■■□□□ 1.97
EEF1D-232ENST00000530445 WDR62O43379 1518 aa27.36■■□□□ 1.97
EEF1D-232ENST00000530445 CCDC88BA6NC98 1476 aa27.24■■□□□ 1.95
EEF1D-232ENST00000530445 PRDM2Q13029 1718 aa27.2■■□□□ 1.94
EEF1D-232ENST00000530445 URB2Q14146 1524 aaKnown RBP27.17■■□□□ 1.94
EEF1D-232ENST00000530445 TOPBP1Q92547 1522 aa26.89■■□□□ 1.89
EEF1D-232ENST00000530445 ZNF608Q9ULD9 1512 aaPredicted RBP26.82■■□□□ 1.88
EEF1D-232ENST00000530445 DNMBPQ6XZF7 1577 aa26.8■■□□□ 1.88
EEF1D-232ENST00000530445 IFT140Q96RY7 1462 aa26.78■■□□□ 1.88
EEF1D-232ENST00000530445 ABCC8Q09428 1581 aa26.73■■□□□ 1.87
EEF1D-232ENST00000530445 SUPT5HO00267 1087 aaKnown RBP26.69■■□□□ 1.86
EEF1D-232ENST00000530445 EIF4G3O43432 1585 aaKnown RBP26.68■■□□□ 1.86
EEF1D-232ENST00000530445 OSCARQ8IYS5 282 aa26.67■■□□□ 1.86
EEF1D-232ENST00000530445 GRWD1Q9BQ67 446 aaKnown RBP eCLIP26.66■■□□□ 1.869e-25■□□□□ 9.7
EEF1D-232ENST00000530445 TRIM41Q8WV44 630 aa26.65■■□□□ 1.86
EEF1D-232ENST00000530445 TARBP1Q13395 1621 aaKnown RBP26.65■■□□□ 1.86
EEF1D-232ENST00000530445 RNF39Q9H2S5 420 aa26.64■■□□□ 1.86
EEF1D-232ENST00000530445 POLA1P09884 1462 aaPredicted RBP26.62■■□□□ 1.85
EEF1D-232ENST00000530445 AQRO60306 1485 aaKnown RBP eCLIP26.58■■□□□ 1.851e-9■■■■□ 21.4
EEF1D-232ENST00000530445 RAD54L2Q9Y4B4 1467 aa26.56■■□□□ 1.84
EEF1D-232ENST00000530445 CUX1P39880 1505 aa26.54■■□□□ 1.84
EEF1D-232ENST00000530445 FGD5Q6ZNL6 1462 aa26.51■■□□□ 1.83
EEF1D-232ENST00000530445 CHD1O14646 1710 aa26.48■■□□□ 1.83
EEF1D-232ENST00000530445 SOGA1O94964 1423 aa26.48■■□□□ 1.83
EEF1D-232ENST00000530445 TDRD9Q8NDG6 1382 aaKnown RBP26.45■■□□□ 1.82
EEF1D-232ENST00000530445 RIMBP3CA6NJZ7 1639 aa26.42■■□□□ 1.82
EEF1D-232ENST00000530445 RIMBP3BA6NNM3 1639 aa26.42■■□□□ 1.82
EEF1D-232ENST00000530445 RIMBP3Q9UFD9 1639 aa26.42■■□□□ 1.82
EEF1D-232ENST00000530445 FBLN2P98095 1184 aa26.36■■□□□ 1.81
EEF1D-232ENST00000530445 CACNB1Q02641 598 aaPredicted RBP26.36■■□□□ 1.81
EEF1D-232ENST00000530445 SLC4A1APQ9BWU0 796 aaKnown RBP26.36■■□□□ 1.81
EEF1D-232ENST00000530445 C1QBPQ07021 282 aaKnown RBP26.34■■□□□ 1.81
EEF1D-232ENST00000530445 WDR97A6NE52 1622 aa26.33■■□□□ 1.81
EEF1D-232ENST00000530445 SNAPC4Q5SXM2 1469 aa26.32■■□□□ 1.8
EEF1D-232ENST00000530445 ARHGEF11O15085 1522 aa26.32■■□□□ 1.8
EEF1D-232ENST00000530445 SLC4A2P04920 1241 aa26.25■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms