RNA–Protein interactions for RNA: ENST00000538171.5

TRAP1-202, Transcript of TNF receptor associated protein 1, humanhuman

TSL 2 BASIC

Gene TRAP1, Length 2,052 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAP1-202ENST00000538171 NISCHQ9Y2I1 1504 aa48.7■■■■■ 5.39
TRAP1-202ENST00000538171 CCDC180Q9P1Z9 1646 aa41.82■■■■■ 4.29
TRAP1-202ENST00000538171 ZCCHC6Q5VYS8 1495 aaKnown RBP41.15■■■■■ 4.18
TRAP1-202ENST00000538171 SHROOM4Q9ULL8 1493 aa40.85■■■■■ 4.13
TRAP1-202ENST00000538171 DCAF1Q9Y4B6 1507 aa40.12■■■■■ 4.01
TRAP1-202ENST00000538171 DCAF8L2P0C7V8 631 aa40.06■■■■■ 4
TRAP1-202ENST00000538171 SUPT5HO00267 1087 aaKnown RBP39.87■■■■□ 3.97
TRAP1-202ENST00000538171 MYO15BQ96JP2 1530 aa39.15■■■■□ 3.86
TRAP1-202ENST00000538171 SCRIBQ14160 1630 aa38.84■■■■□ 3.81
TRAP1-202ENST00000538171 ABCC9O60706 1549 aa38.79■■■■□ 3.8
TRAP1-202ENST00000538171 CHIC1Q5VXU3 224 aa38.7■■■■□ 3.79
TRAP1-202ENST00000538171 NACADO15069 1562 aa38.65■■■■□ 3.78
TRAP1-202ENST00000538171 RSF1Q96T23 1441 aaPredicted RBP38.28■■■■□ 3.72
TRAP1-202ENST00000538171 RB1CC1Q8TDY2 1594 aa38.07■■■■□ 3.69
TRAP1-202ENST00000538171 CECR2Q9BXF3 1484 aa37.86■■■■□ 3.65
TRAP1-202ENST00000538171 MROH2BQ7Z745 1585 aa37.76■■■■□ 3.64
TRAP1-202ENST00000538171 WIZO95785 1651 aa37.58■■■■□ 3.61
TRAP1-202ENST00000538171 UNC13AQ9UPW8 1703 aa37.57■■■■□ 3.6
TRAP1-202ENST00000538171 BAZ1AQ9NRL2 1556 aaPredicted RBP37.48■■■■□ 3.59
TRAP1-202ENST00000538171 LOC105371045A0A1W2PR82 267 aa37.4■■■■□ 3.58
TRAP1-202ENST00000538171 TRIM41Q8WV44 630 aa37.29■■■■□ 3.56
TRAP1-202ENST00000538171 SMARCA4P51532 1647 aa37.21■■■■□ 3.55
TRAP1-202ENST00000538171 TOP2AP11388 1531 aaKnown RBP37.07■■■■□ 3.52
TRAP1-202ENST00000538171 EIF4G1Q04637 1599 aaKnown RBP37.02■■■■□ 3.52
TRAP1-202ENST00000538171 BICRAQ9NZM4 1560 aa37■■■■□ 3.51
TRAP1-202ENST00000538171 PCGF6Q9BYE7 350 aa36.98■■■■□ 3.51
TRAP1-202ENST00000538171 HRCP23327 699 aa36.82■■■■□ 3.49
TRAP1-202ENST00000538171 SMARCA2P51531 1590 aa36.82■■■■□ 3.48
TRAP1-202ENST00000538171 FAM9AQ8IZU1 332 aaPredicted RBP36.8■■■■□ 3.48
TRAP1-202ENST00000538171 CCDC88BA6NC98 1476 aa36.77■■■■□ 3.48
TRAP1-202ENST00000538171 PABPN1Q86U42 306 aaKnown RBP eCLIP36.76■■■■□ 3.475e-7■□□□□ 9.8
TRAP1-202ENST00000538171 PEG3Q9GZU2 1588 aa36.61■■■■□ 3.45
TRAP1-202ENST00000538171 TRIM26Q12899 539 aaPredicted RBP36.53■■■■□ 3.44
TRAP1-202ENST00000538171 ABCC8Q09428 1581 aa36.52■■■■□ 3.44
TRAP1-202ENST00000538171 EHMT2Q96KQ7 1210 aa36.36■■■■□ 3.41
TRAP1-202ENST00000538171 ATAD2BQ9ULI0 1458 aa36.27■■■■□ 3.4
TRAP1-202ENST00000538171 BAZ1BQ9UIG0 1483 aaKnown RBP36.15■■■■□ 3.38
TRAP1-202ENST00000538171 SOGA1O94964 1423 aa36.03■■■■□ 3.36
TRAP1-202ENST00000538171 EEA1Q15075 1411 aa36.01■■■■□ 3.35
TRAP1-202ENST00000538171 WRNQ14191 1432 aaPredicted RBP eCLIP35.99■■■■□ 3.351e-6■■■□□ 18.5
TRAP1-202ENST00000538171 PPARGC1BQ86YN6 1023 aaKnown RBP35.95■■■■□ 3.34
TRAP1-202ENST00000538171 SYNJ1O43426 1573 aa35.87■■■■□ 3.33
TRAP1-202ENST00000538171 RUSC2Q8N2Y8 1516 aa35.87■■■■□ 3.33
TRAP1-202ENST00000538171 CSRNP3Q8WYN3 585 aa35.8■■■■□ 3.32
TRAP1-202ENST00000538171 TNIKQ9UKE5 1360 aa35.76■■■■□ 3.32
TRAP1-202ENST00000538171 CEP162Q5TB80 1403 aa35.74■■■■□ 3.31
TRAP1-202ENST00000538171 HMGXB3Q12766 1538 aa35.74■■■■□ 3.31
TRAP1-202ENST00000538171 NCAPD3P42695 1498 aa35.68■■■■□ 3.3
TRAP1-202ENST00000538171 GOLGA3Q08378 1498 aa35.67■■■■□ 3.3
TRAP1-202ENST00000538171 ZEB1P37275 1124 aaPredicted RBP35.62■■■■□ 3.29
TRAP1-202ENST00000538171 KIF21BO75037 1637 aa35.57■■■■□ 3.28
TRAP1-202ENST00000538171 TOP2BQ02880 1626 aa35.56■■■■□ 3.28
TRAP1-202ENST00000538171 UBTFP17480 764 aaKnown RBP35.54■■■■□ 3.28
TRAP1-202ENST00000538171 CEP164Q9UPV0 1460 aa35.52■■■■□ 3.28
TRAP1-202ENST00000538171 BIVM-ERCC5R4GMW8 1640 aa35.5■■■■□ 3.27
TRAP1-202ENST00000538171 CFTRP13569 1480 aa35.27■■■■□ 3.24
TRAP1-202ENST00000538171 PRDM2Q13029 1718 aa35.23■■■■□ 3.23
TRAP1-202ENST00000538171 RAPGEF2Q9Y4G8 1499 aa35.23■■■■□ 3.23
TRAP1-202ENST00000538171 CUX1P39880 1505 aa35.21■■■■□ 3.23
TRAP1-202ENST00000538171 CLIP1P30622 1438 aa35.16■■■■□ 3.22
TRAP1-202ENST00000538171 TTBK1Q5TCY1 1321 aaPredicted RBP35.13■■■■□ 3.21
TRAP1-202ENST00000538171 ERICH3Q5RHP9 1530 aa35.07■■■■□ 3.2
TRAP1-202ENST00000538171 PRXQ9BXM0 1461 aa35.02■■■■□ 3.2
TRAP1-202ENST00000538171 VPS8Q8N3P4 1428 aa35.02■■■■□ 3.2
TRAP1-202ENST00000538171 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP35.01■■■■□ 3.2
TRAP1-202ENST00000538171 CC2D2AQ9P2K1 1620 aa34.98■■■■□ 3.19
TRAP1-202ENST00000538171 CCER1Q8TC90 406 aaPredicted RBP34.95■■■■□ 3.19
TRAP1-202ENST00000538171 KIF27Q86VH2 1401 aa34.94■■■■□ 3.18
TRAP1-202ENST00000538171 CADPSQ9ULU8 1353 aa34.89■■■■□ 3.18
TRAP1-202ENST00000538171 RANGAP1P46060 587 aaPredicted RBP34.75■■■■□ 3.15
TRAP1-202ENST00000538171 APLP2Q06481 763 aa34.71■■■■□ 3.15
TRAP1-202ENST00000538171 ARAP1Q96P48 1450 aa34.69■■■■□ 3.14
TRAP1-202ENST00000538171 CUX2O14529 1486 aa34.64■■■■□ 3.14
TRAP1-202ENST00000538171 FGD5Q6ZNL6 1462 aa34.63■■■■□ 3.13
TRAP1-202ENST00000538171 FANCD2Q9BXW9 1451 aa34.57■■■■□ 3.12
TRAP1-202ENST00000538171 IGF1RP08069 1367 aa34.52■■■■□ 3.12
TRAP1-202ENST00000538171 ARHGAP35Q9NRY4 1499 aa34.46■■■■□ 3.11
TRAP1-202ENST00000538171 DNMBPQ6XZF7 1577 aa34.45■■■■□ 3.11
TRAP1-202ENST00000538171 HNRNPUL2Q1KMD3 747 aaKnown RBP34.45■■■■□ 3.1
TRAP1-202ENST00000538171 CARMIL1Q5VZK9 1371 aa34.37■■■■□ 3.09
TRAP1-202ENST00000538171 NESP48681 1621 aa34.36■■■■□ 3.09
TRAP1-202ENST00000538171 TOPBP1Q92547 1522 aa34.33■■■■□ 3.09
TRAP1-202ENST00000538171 LAMC3Q9Y6N6 1575 aa34.3■■■■□ 3.08
TRAP1-202ENST00000538171 KANK4Q5T7N3 995 aaPredicted RBP34.28■■■■□ 3.08
TRAP1-202ENST00000538171 ABCA10Q8WWZ4 1543 aa34.28■■■■□ 3.08
TRAP1-202ENST00000538171 POLA1P09884 1462 aaPredicted RBP34.27■■■■□ 3.08
TRAP1-202ENST00000538171 RAD54L2Q9Y4B4 1467 aa34.24■■■■□ 3.07
TRAP1-202ENST00000538171 RRBP1Q9P2E9 1410 aaKnown RBP34.16■■■■□ 3.06
TRAP1-202ENST00000538171 CUL7Q14999 1698 aa34.14■■■■□ 3.06
TRAP1-202ENST00000538171 WDR97A6NE52 1622 aa34.12■■■■□ 3.05
TRAP1-202ENST00000538171 MAP3K1Q13233 1512 aa34.1■■■■□ 3.05
TRAP1-202ENST00000538171 URB2Q14146 1524 aaKnown RBP34.09■■■■□ 3.05
TRAP1-202ENST00000538171 TIAM1Q13009 1591 aa34.09■■■■□ 3.05
TRAP1-202ENST00000538171 DIEXFQ68CQ4 756 aaKnown RBP34.05■■■■□ 3.04
TRAP1-202ENST00000538171 CTTNBP2Q8WZ74 1663 aa34.03■■■■□ 3.04
TRAP1-202ENST00000538171 FHAD1B1AJZ9 1412 aa33.99■■■■□ 3.03
TRAP1-202ENST00000538171 PDS5BQ9NTI5 1447 aa33.98■■■■□ 3.03
TRAP1-202ENST00000538171 CCNB3Q8WWL7 1395 aa33.98■■■■□ 3.03
TRAP1-202ENST00000538171 ZNF316A6NFI3 1004 aaPredicted RBP33.96■■■■□ 3.03
TRAP1-202ENST00000538171 KIF21AQ7Z4S6 1674 aa33.96■■■■□ 3.03
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms