RNA–Protein interactions for RNA: ENST00000553967.1

TUBB3-203, Transcript of tubulin beta 3 class III, humanhuman

TSL 2 BASIC

Gene TUBB3, Length 736 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-203ENST00000553967 NISCHQ9Y2I1 1504 aa39.47■■■■□ 3.91
TUBB3-203ENST00000553967 CCDC180Q9P1Z9 1646 aa35.36■■■■□ 3.25
TUBB3-203ENST00000553967 ABCC9O60706 1549 aa35.34■■■■□ 3.25
TUBB3-203ENST00000553967 RB1CC1Q8TDY2 1594 aa33.65■■■□□ 2.98
TUBB3-203ENST00000553967 NACADO15069 1562 aa33.44■■■□□ 2.94
TUBB3-203ENST00000553967 DCAF8L2P0C7V8 631 aa33.34■■■□□ 2.93
TUBB3-203ENST00000553967 DNAJC5BQ9UF47 199 aa33.12■■■□□ 2.89
TUBB3-203ENST00000553967 MYO15BQ96JP2 1530 aa33.01■■■□□ 2.87
TUBB3-203ENST00000553967 PABPN1Q86U42 306 aaKnown RBP eCLIP32.94■■■□□ 2.86
TUBB3-203ENST00000553967 UNC13AQ9UPW8 1703 aa32.86■■■□□ 2.85
TUBB3-203ENST00000553967 ZCCHC6Q5VYS8 1495 aaKnown RBP32.72■■■□□ 2.83
TUBB3-203ENST00000553967 BICRAQ9NZM4 1560 aa32.66■■■□□ 2.82
TUBB3-203ENST00000553967 DCAF1Q9Y4B6 1507 aa32.6■■■□□ 2.81
TUBB3-203ENST00000553967 SCRIBQ14160 1630 aa32.24■■■□□ 2.75
TUBB3-203ENST00000553967 SHROOM4Q9ULL8 1493 aa32.23■■■□□ 2.75
TUBB3-203ENST00000553967 CC2D2AQ9P2K1 1620 aa31.92■■■□□ 2.7
TUBB3-203ENST00000553967 EIF4G1Q04637 1599 aaKnown RBP31.86■■■□□ 2.69
TUBB3-203ENST00000553967 CECR2Q9BXF3 1484 aa31.83■■■□□ 2.69
TUBB3-203ENST00000553967 NCAPD3P42695 1498 aa30.89■■■□□ 2.53
TUBB3-203ENST00000553967 ATAD2BQ9ULI0 1458 aa30.8■■■□□ 2.52
TUBB3-203ENST00000553967 SMARCA4P51532 1647 aa30.76■■■□□ 2.52
TUBB3-203ENST00000553967 SMARCA2P51531 1590 aa30.71■■■□□ 2.51
TUBB3-203ENST00000553967 HMGXB3Q12766 1538 aa30.64■■■□□ 2.5
TUBB3-203ENST00000553967 BAZ1AQ9NRL2 1556 aaPredicted RBP30.63■■■□□ 2.49
TUBB3-203ENST00000553967 ERCC6Q03468 1493 aa30.51■■■□□ 2.48
TUBB3-203ENST00000553967 BAZ1BQ9UIG0 1483 aaKnown RBP30.5■■■□□ 2.47
TUBB3-203ENST00000553967 PEG3Q9GZU2 1588 aa30.46■■■□□ 2.47
TUBB3-203ENST00000553967 CUX2O14529 1486 aa30.43■■■□□ 2.46
TUBB3-203ENST00000553967 MROH2BQ7Z745 1585 aa30.41■■■□□ 2.46
TUBB3-203ENST00000553967 NESP48681 1621 aa30.37■■■□□ 2.45
TUBB3-203ENST00000553967 DNAJC5Q9H3Z4 198 aa30.37■■■□□ 2.45
TUBB3-203ENST00000553967 LAMC3Q9Y6N6 1575 aa30.16■■■□□ 2.42
TUBB3-203ENST00000553967 WIZO95785 1651 aa30.04■■■□□ 2.4
TUBB3-203ENST00000553967 THOC2Q8NI27 1593 aaKnown RBP30.03■■■□□ 2.4
TUBB3-203ENST00000553967 PDS5BQ9NTI5 1447 aa30.01■■■□□ 2.39
TUBB3-203ENST00000553967 KIF21AQ7Z4S6 1674 aa29.96■■■□□ 2.39
TUBB3-203ENST00000553967 CADPSQ9ULU8 1353 aa29.96■■■□□ 2.39
TUBB3-203ENST00000553967 RSF1Q96T23 1441 aaPredicted RBP29.82■■■□□ 2.36
TUBB3-203ENST00000553967 MRC2Q9UBG0 1479 aa29.74■■■□□ 2.35
TUBB3-203ENST00000553967 TOP2AP11388 1531 aaKnown RBP29.67■■■□□ 2.34
TUBB3-203ENST00000553967 WDR62O43379 1518 aa29.65■■■□□ 2.34
TUBB3-203ENST00000553967 CEP164Q9UPV0 1460 aa29.63■■■□□ 2.33
TUBB3-203ENST00000553967 CFTRP13569 1480 aa29.62■■■□□ 2.33
TUBB3-203ENST00000553967 FANCD2Q9BXW9 1451 aa29.61■■■□□ 2.33
TUBB3-203ENST00000553967 CCDC88BA6NC98 1476 aa29.36■■■□□ 2.29
TUBB3-203ENST00000553967 URB2Q14146 1524 aaKnown RBP29.35■■■□□ 2.29
TUBB3-203ENST00000553967 PRDM2Q13029 1718 aa29.28■■■□□ 2.28
TUBB3-203ENST00000553967 OSCARQ8IYS5 282 aa29.09■■■□□ 2.25
TUBB3-203ENST00000553967 TRIM41Q8WV44 630 aa29.07■■■□□ 2.24
TUBB3-203ENST00000553967 TOPBP1Q92547 1522 aa29.05■■■□□ 2.24
TUBB3-203ENST00000553967 IFT140Q96RY7 1462 aa29.04■■■□□ 2.24
TUBB3-203ENST00000553967 ABCC8Q09428 1581 aa29.01■■■□□ 2.23
TUBB3-203ENST00000553967 ZNF608Q9ULD9 1512 aaPredicted RBP28.99■■■□□ 2.23
TUBB3-203ENST00000553967 DNMBPQ6XZF7 1577 aa28.94■■■□□ 2.22
TUBB3-203ENST00000553967 EIF4G3O43432 1585 aaKnown RBP28.8■■■□□ 2.2
TUBB3-203ENST00000553967 TARBP1Q13395 1621 aaKnown RBP28.77■■■□□ 2.2
TUBB3-203ENST00000553967 POLA1P09884 1462 aaPredicted RBP28.76■■■□□ 2.19
TUBB3-203ENST00000553967 AQRO60306 1485 aaKnown RBP eCLIP28.75■■■□□ 2.19
TUBB3-203ENST00000553967 RAD54L2Q9Y4B4 1467 aa28.66■■■□□ 2.18
TUBB3-203ENST00000553967 RIMBP3CA6NJZ7 1639 aa28.65■■■□□ 2.18
TUBB3-203ENST00000553967 RIMBP3BA6NNM3 1639 aa28.65■■■□□ 2.18
TUBB3-203ENST00000553967 RIMBP3Q9UFD9 1639 aa28.65■■■□□ 2.18
TUBB3-203ENST00000553967 SOGA1O94964 1423 aa28.65■■■□□ 2.18
TUBB3-203ENST00000553967 TDRD9Q8NDG6 1382 aaKnown RBP28.59■■■□□ 2.17
TUBB3-203ENST00000553967 FGD5Q6ZNL6 1462 aa28.59■■■□□ 2.17
TUBB3-203ENST00000553967 SUPT5HO00267 1087 aaKnown RBP28.58■■■□□ 2.17
TUBB3-203ENST00000553967 ARHGEF11O15085 1522 aa28.58■■■□□ 2.17
TUBB3-203ENST00000553967 CUX1P39880 1505 aa28.58■■■□□ 2.17
TUBB3-203ENST00000553967 CHD1O14646 1710 aa28.57■■■□□ 2.16
TUBB3-203ENST00000553967 FBLN2P98095 1184 aa28.57■■■□□ 2.16
TUBB3-203ENST00000553967 WDR97A6NE52 1622 aa28.48■■■□□ 2.15
TUBB3-203ENST00000553967 SNAPC4Q5SXM2 1469 aa28.44■■■□□ 2.14
TUBB3-203ENST00000553967 CYB5RLQ6IPT4 315 aa28.4■■■□□ 2.14
TUBB3-203ENST00000553967 GRIN2BQ13224 1484 aa28.38■■■□□ 2.13
TUBB3-203ENST00000553967 CHMP7Q8WUX9 453 aaPredicted RBP28.37■■■□□ 2.13
TUBB3-203ENST00000553967 MAGI1Q96QZ7 1491 aaPredicted RBP28.37■■■□□ 2.13
TUBB3-203ENST00000553967 ARAP1Q96P48 1450 aa28.3■■■□□ 2.12
TUBB3-203ENST00000553967 GAPVD1Q14C86 1478 aa28.29■■■□□ 2.12
TUBB3-203ENST00000553967 SYNJ2O15056 1496 aa28.28■■■□□ 2.12
TUBB3-203ENST00000553967 CLASP1Q7Z460 1538 aa28.27■■■□□ 2.12
TUBB3-203ENST00000553967 ABCA10Q8WWZ4 1543 aa28.27■■■□□ 2.12
TUBB3-203ENST00000553967 SYNJ1O43426 1573 aa28.26■■■□□ 2.11
TUBB3-203ENST00000553967 PBRM1Q86U86 1689 aa28.24■■■□□ 2.11
TUBB3-203ENST00000553967 ABCA5Q8WWZ7 1642 aa28.2■■■□□ 2.1
TUBB3-203ENST00000553967 WRNQ14191 1432 aaPredicted RBP eCLIP28.18■■■□□ 2.1
TUBB3-203ENST00000553967 TOP2BQ02880 1626 aa28.13■■■□□ 2.09
TUBB3-203ENST00000553967 BIVM-ERCC5R4GMW8 1640 aa28.11■■■□□ 2.09
TUBB3-203ENST00000553967 TRHP20396 242 aaPredicted RBP28.07■■■□□ 2.08
TUBB3-203ENST00000553967 GRIN2AQ12879 1464 aa28.02■■■□□ 2.08
TUBB3-203ENST00000553967 ADAMTS12P58397 1594 aa27.99■■■□□ 2.07
TUBB3-203ENST00000553967 FHAD1B1AJZ9 1412 aa27.94■■■□□ 2.06
TUBB3-203ENST00000553967 ERICH3Q5RHP9 1530 aa27.92■■■□□ 2.06
TUBB3-203ENST00000553967 NUP160Q12769 1436 aa27.92■■■□□ 2.06
TUBB3-203ENST00000553967 CEP170Q5SW79 1584 aa27.9■■■□□ 2.06
TUBB3-203ENST00000553967 ERCC6L2Q5T890 1561 aa27.83■■■□□ 2.05
TUBB3-203ENST00000553967 SHROOM2Q13796 1616 aa27.77■■■□□ 2.04
TUBB3-203ENST00000553967 JPH4Q96JJ6 628 aa27.66■■■□□ 2.02
TUBB3-203ENST00000553967 PRG4Q92954 1404 aaPredicted RBP27.66■■■□□ 2.02
TUBB3-203ENST00000553967 IGF1RP08069 1367 aa27.6■■■□□ 2.01
TUBB3-203ENST00000553967 KIF27Q86VH2 1401 aa27.6■■■□□ 2.01
Retrieved 100 of 20,778 RNA–protein pairs in 100.3 ms