Protein–RNA interactions for Protein: Q9H0D6

XRN2, 5'-3' exoribonuclease 2, humanhuman

Known RBP eCLIP

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRN2Q9H0D6 CORO7-PAM16-203ENST00000575334 3815 ntTSL 216.99■□□□□ 0.314e-6■■□□□ 12.4
XRN2Q9H0D6 PAM16-214ENST00000576217 493 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.34e-6■■□□□ 12.4
XRN2Q9H0D6 CORO7-PAM16-202ENST00000572467 3284 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.414e-6■■□□□ 12.4
XRN2Q9H0D6 CDYL-207ENST00000472453 1764 ntTSL 1 (best)27.34■■□□□ 1.975e-6■■□□□ 12.4
XRN2Q9H0D6 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.255e-6■■□□□ 12.4
XRN2Q9H0D6 CDYL-208ENST00000483019 773 ntTSL 212.06□□□□□ -0.485e-6■■□□□ 12.4
XRN2Q9H0D6 CDYL-204ENST00000440139 690 ntTSL 310.41□□□□□ -0.745e-6■■□□□ 12.4
XRN2Q9H0D6 CDYL-201ENST00000328908 3419 ntTSL 1 (best) BASIC9.57□□□□□ -0.885e-6■■□□□ 12.4
XRN2Q9H0D6 CDYL-209ENST00000491864 614 ntTSL 57.46□□□□□ -1.225e-6■■□□□ 12.4
XRN2Q9H0D6 BCAM-209ENST00000590624 991 ntTSL 1 (best)23.75■■□□□ 1.396e-16■■□□□ 12.4
XRN2Q9H0D6 DDX17-206ENST00000467279 712 ntTSL 527.51■■□□□ 1.993e-13■■□□□ 12.4
XRN2Q9H0D6 VARS2-204ENST00000467717 863 ntTSL 319.34■□□□□ 0.693e-13■■□□□ 12.4
XRN2Q9H0D6 VARS2-209ENST00000477288 6054 ntTSL 218.63■□□□□ 0.573e-13■■□□□ 12.4
XRN2Q9H0D6 DDX17-209ENST00000479734 441 ntTSL 418.59■□□□□ 0.573e-13■■□□□ 12.4
XRN2Q9H0D6 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.493e-13■■□□□ 12.4
XRN2Q9H0D6 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.493e-13■■□□□ 12.4
XRN2Q9H0D6 VARS2-203ENST00000428017 1103 ntTSL 217.24■□□□□ 0.353e-13■■□□□ 12.4
XRN2Q9H0D6 IRF3-218ENST00000597369 550 ntTSL 216.74■□□□□ 0.273e-13■■□□□ 12.4
XRN2Q9H0D6 DDX17-203ENST00000403230 2322 ntAPPRIS ALT2 TSL 1 (best)16.45■□□□□ 0.223e-13■■□□□ 12.4
XRN2Q9H0D6 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.143e-13■■□□□ 12.4
XRN2Q9H0D6 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC14.96□□□□□ -0.023e-13■■□□□ 12.4
XRN2Q9H0D6 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.033e-13■■□□□ 12.4
XRN2Q9H0D6 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC14.66□□□□□ -0.063e-13■■□□□ 12.4
XRN2Q9H0D6 DDX17-201ENST00000216019 6441 ntTSL 1 (best)13□□□□□ -0.333e-13■■□□□ 12.4
XRN2Q9H0D6 DDX17-205ENST00000432525 1354 ntTSL 212.34□□□□□ -0.433e-13■■□□□ 12.4
XRN2Q9H0D6 VARS2-213ENST00000625423 3362 ntTSL 2 BASIC11.13□□□□□ -0.633e-13■■□□□ 12.4
XRN2Q9H0D6 CTSB-215ENST00000528965 556 ntTSL 319.03■□□□□ 0.643e-6■■□□□ 12.4
XRN2Q9H0D6 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC16.43■□□□□ 0.222e-6■■□□□ 12.3
XRN2Q9H0D6 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC25.04■■□□□ 1.62e-6■■□□□ 12.3
XRN2Q9H0D6 TCF25-224ENST00000570116 1947 ntTSL 516.84■□□□□ 0.292e-6■■□□□ 12.3
XRN2Q9H0D6 Telomerase-vert.1-201ENST00000363312 438 ntBASIC21.87■■□□□ 1.099e-34■■□□□ 12.3
XRN2Q9H0D6 TERC-201ENST00000602385 541 ntBASIC20.97■□□□□ 0.959e-34■■□□□ 12.3
XRN2Q9H0D6 ITGA5-211ENST00000552564 4996 ntTSL 214.09□□□□□ -0.152e-6■■□□□ 12.3
XRN2Q9H0D6 GPI-201ENST00000356487 2210 ntAPPRIS P1 TSL 1 (best) BASIC28.08■■■□□ 2.096e-7■■□□□ 12.3
XRN2Q9H0D6 GPI-208ENST00000588991 2021 ntTSL 221.14■□□□□ 0.986e-7■■□□□ 12.3
XRN2Q9H0D6 GPI-205ENST00000586425 1799 ntTSL 5 BASIC15.5■□□□□ 0.076e-7■■□□□ 12.3
XRN2Q9H0D6 GPI-202ENST00000415930 4000 ntTSL 2 BASIC8.22□□□□□ -1.096e-7■■□□□ 12.3
XRN2Q9H0D6 EPS8L2-221ENST00000531471 448 ntTSL 326.85■■□□□ 1.898e-13■■□□□ 12.3
XRN2Q9H0D6 TRMT1-211ENST00000588511 2251 ntTSL 519.67■□□□□ 0.745e-22■■□□□ 12.3
XRN2Q9H0D6 TRMT1-222ENST00000593157 2127 ntTSL 219.2■□□□□ 0.665e-22■■□□□ 12.3
XRN2Q9H0D6 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.445e-22■■□□□ 12.3
XRN2Q9H0D6 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.015e-22■■□□□ 12.3
XRN2Q9H0D6 TRMT1-217ENST00000592062 2579 ntAPPRIS P3 TSL 5 BASIC14.32□□□□□ -0.125e-22■■□□□ 12.3
XRN2Q9H0D6 TRMT1-202ENST00000357720 2142 ntAPPRIS P3 TSL 2 BASIC13.95□□□□□ -0.185e-22■■□□□ 12.3
XRN2Q9H0D6 KLF6-205ENST00000492125 432 ntTSL 1 (best)12.57□□□□□ -0.41e-6■■□□□ 12.3
XRN2Q9H0D6 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC19.1■□□□□ 0.654e-6■■□□□ 12.3
XRN2Q9H0D6 GPS1-217ENST00000583009 574 ntTSL 414.77□□□□□ -0.054e-6■■□□□ 12.3
XRN2Q9H0D6 FOXP1-202ENST00000318789 7114 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.094e-6■■□□□ 12.3
XRN2Q9H0D6 FOXP1-222ENST00000615603 7140 ntTSL 5 BASIC14.5□□□□□ -0.094e-6■■□□□ 12.3
XRN2Q9H0D6 FOXP1-209ENST00000475937 4967 ntAPPRIS P3 TSL 1 (best) BASIC9.87□□□□□ -0.834e-6■■□□□ 12.3
XRN2Q9H0D6 FOXP1-203ENST00000327590 5685 ntTSL 27.75□□□□□ -1.174e-6■■□□□ 12.3
XRN2Q9H0D6 MAN2A2-206ENST00000558290 1049 ntTSL 521.36■■□□□ 1.019e-7■■□□□ 12.3
XRN2Q9H0D6 MAN2A2-223ENST00000560534 361 ntTSL 520.07■□□□□ 0.89e-7■■□□□ 12.3
XRN2Q9H0D6 MAN2A2-210ENST00000558853 624 ntTSL 319.55■□□□□ 0.729e-7■■□□□ 12.3
XRN2Q9H0D6 MAN2A2-218ENST00000559999 529 ntTSL 418.38■□□□□ 0.539e-7■■□□□ 12.3
XRN2Q9H0D6 RBM14-206ENST00000460762 459 ntTSL 224.28■■□□□ 1.481e-8■■□□□ 12.3
XRN2Q9H0D6 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC26.67■■□□□ 1.865e-6■■□□□ 12.3
XRN2Q9H0D6 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC25.22■■□□□ 1.635e-6■■□□□ 12.3
XRN2Q9H0D6 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC25.22■■□□□ 1.635e-6■■□□□ 12.3
XRN2Q9H0D6 PCMT1-209ENST00000494411 600 ntTSL 422.46■■□□□ 1.195e-6■■□□□ 12.3
XRN2Q9H0D6 PCMT1-207ENST00000484601 1095 ntTSL 521.86■■□□□ 1.095e-6■■□□□ 12.3
XRN2Q9H0D6 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.065e-6■■□□□ 12.3
XRN2Q9H0D6 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC21.41■■□□□ 1.025e-6■■□□□ 12.3
XRN2Q9H0D6 PCMT1-204ENST00000460828 582 ntTSL 521.15■□□□□ 0.985e-6■■□□□ 12.3
XRN2Q9H0D6 PCMT1-210ENST00000495487 548 ntTSL 318.53■□□□□ 0.565e-6■■□□□ 12.3
XRN2Q9H0D6 PCMT1-208ENST00000486585 801 ntTSL 312.14□□□□□ -0.475e-6■■□□□ 12.3
XRN2Q9H0D6 DNM2-214ENST00000590787 4299 ntTSL 211.4□□□□□ -0.581e-6■■□□□ 12.3
XRN2Q9H0D6 EPS8L2-213ENST00000529346 1718 ntTSL 224.72■■□□□ 1.555e-8■■□□□ 12.3
XRN2Q9H0D6 TCF7L2-208ENST00000369389 691 ntTSL 428.07■■■□□ 2.084e-8■■□□□ 12.3
XRN2Q9H0D6 TECR-221ENST00000600395 846 ntTSL 327.52■■■□□ 24e-8■■□□□ 12.3
XRN2Q9H0D6 TECR-213ENST00000598408 508 ntTSL 323.74■■□□□ 1.394e-8■■□□□ 12.3
XRN2Q9H0D6 MSH6-206ENST00000455383 578 ntTSL 523.04■■□□□ 1.284e-8■■□□□ 12.3
XRN2Q9H0D6 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC22.53■■□□□ 1.24e-8■■□□□ 12.3
XRN2Q9H0D6 MSH6-207ENST00000456246 846 ntTSL 321.3■■□□□ 14e-8■■□□□ 12.3
XRN2Q9H0D6 MSH6-203ENST00000420813 491 ntTSL 421.04■□□□□ 0.964e-8■■□□□ 12.3
XRN2Q9H0D6 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.784e-8■■□□□ 12.3
XRN2Q9H0D6 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC19.82■□□□□ 0.764e-8■■□□□ 12.3
XRN2Q9H0D6 TECR-223ENST00000601350 687 ntTSL 319.06■□□□□ 0.644e-8■■□□□ 12.3
XRN2Q9H0D6 CSNK1E-208ENST00000431611 814 ntTSL 518.46■□□□□ 0.554e-8■■□□□ 12.3
XRN2Q9H0D6 TECR-222ENST00000601187 559 ntTSL 318.37■□□□□ 0.534e-8■■□□□ 12.3
XRN2Q9H0D6 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC17.73■□□□□ 0.434e-8■■□□□ 12.3
XRN2Q9H0D6 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.434e-8■■□□□ 12.3
XRN2Q9H0D6 CSNK1E-210ENST00000442216 787 ntTSL 217.46■□□□□ 0.394e-8■■□□□ 12.3
XRN2Q9H0D6 CSNK1E-209ENST00000431632 763 ntTSL 216.64■□□□□ 0.254e-8■■□□□ 12.3
XRN2Q9H0D6 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.254e-8■■□□□ 12.3
XRN2Q9H0D6 TECR-203ENST00000593775 720 ntTSL 216.06■□□□□ 0.164e-8■■□□□ 12.3
XRN2Q9H0D6 GPM6B-206ENST00000468080 587 ntTSL 415.72■□□□□ 0.114e-8■■□□□ 12.3
XRN2Q9H0D6 MSH6-208ENST00000493177 813 ntTSL 315.61■□□□□ 0.094e-8■■□□□ 12.3
XRN2Q9H0D6 GPM6B-202ENST00000355135 1673 ntAPPRIS ALT1 TSL 1 (best) BASIC15.58■□□□□ 0.084e-8■■□□□ 12.3
XRN2Q9H0D6 AHCY-202ENST00000468908 675 ntTSL 514.95□□□□□ -0.024e-8■■□□□ 12.3
XRN2Q9H0D6 HS3ST3B1-202ENST00000466596 2808 ntTSL 214.4□□□□□ -0.14e-8■■□□□ 12.3
XRN2Q9H0D6 GPM6B-203ENST00000356942 1830 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.134e-8■■□□□ 12.3
XRN2Q9H0D6 GPM6B-208ENST00000475307 678 ntTSL 313.67□□□□□ -0.224e-8■■□□□ 12.3
XRN2Q9H0D6 TECR-206ENST00000594958 601 ntTSL 313.53□□□□□ -0.244e-8■■□□□ 12.3
XRN2Q9H0D6 RBAK-201ENST00000353796 4125 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.274e-8■■□□□ 12.3
XRN2Q9H0D6 TECR-224ENST00000601461 828 ntTSL 313.3□□□□□ -0.284e-8■■□□□ 12.3
XRN2Q9H0D6 DESI1-201ENST00000263256 3833 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.354e-8■■□□□ 12.3
XRN2Q9H0D6 MSH6-215ENST00000622629 4324 ntTSL 5 BASIC12.81□□□□□ -0.364e-8■■□□□ 12.3
XRN2Q9H0D6 MLXIPL-209ENST00000467221 774 ntTSL 512.57□□□□□ -0.41e-44■■□□□ 12.3
XRN2Q9H0D6 MSH6-210ENST00000540021 3930 ntTSL 2 BASIC12.5□□□□□ -0.414e-8■■□□□ 12.3
Retrieved 100 of 21,068 protein–RNA pairs in 96 ms