RNA–Protein interactions for RNA: ENST00000467279.1

DDX17-206, Transcript of DEAD-box helicase 17, humanhuman

TSL 5

Gene DDX17, Length 712 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX17-206ENST00000467279 NISCHQ9Y2I1 1504 aa57.36■■■■■ 6.77
DDX17-206ENST00000467279 CCDC180Q9P1Z9 1646 aa51.02■■■■■ 5.76
DDX17-206ENST00000467279 ABCC9O60706 1549 aa49.73■■■■■ 5.55
DDX17-206ENST00000467279 RB1CC1Q8TDY2 1594 aa47.96■■■■■ 5.27
DDX17-206ENST00000467279 NACADO15069 1562 aa47.93■■■■■ 5.26
DDX17-206ENST00000467279 ZCCHC6Q5VYS8 1495 aaKnown RBP47.83■■■■■ 5.25
DDX17-206ENST00000467279 DCAF8L2P0C7V8 631 aa47.74■■■■■ 5.23
DDX17-206ENST00000467279 MYO15BQ96JP2 1530 aa47.74■■■■■ 5.23
DDX17-206ENST00000467279 DCAF1Q9Y4B6 1507 aa47.54■■■■■ 5.2
DDX17-206ENST00000467279 UNC13AQ9UPW8 1703 aa46.78■■■■■ 5.08
DDX17-206ENST00000467279 SCRIBQ14160 1630 aa46.46■■■■■ 5.03
DDX17-206ENST00000467279 BICRAQ9NZM4 1560 aa46.46■■■■■ 5.03
DDX17-206ENST00000467279 PABPN1Q86U42 306 aaKnown RBP eCLIP46.43■■■■■ 5.02
DDX17-206ENST00000467279 SHROOM4Q9ULL8 1493 aa46.12■■■■■ 4.97
DDX17-206ENST00000467279 DNAJC5BQ9UF47 199 aa45.51■■■■■ 4.88
DDX17-206ENST00000467279 EIF4G1Q04637 1599 aaKnown RBP45.24■■■■■ 4.83
DDX17-206ENST00000467279 CC2D2AQ9P2K1 1620 aa45.02■■■■■ 4.8
DDX17-206ENST00000467279 CECR2Q9BXF3 1484 aa44.72■■■■■ 4.75
DDX17-206ENST00000467279 SMARCA4P51532 1647 aa44.5■■■■■ 4.71
DDX17-206ENST00000467279 BAZ1AQ9NRL2 1556 aaPredicted RBP44.48■■■■■ 4.71
DDX17-206ENST00000467279 NCAPD3P42695 1498 aa44.22■■■■■ 4.67
DDX17-206ENST00000467279 ATAD2BQ9ULI0 1458 aa44.22■■■■■ 4.67
DDX17-206ENST00000467279 SMARCA2P51531 1590 aa44.22■■■■■ 4.67
DDX17-206ENST00000467279 MROH2BQ7Z745 1585 aa44.18■■■■■ 4.66
DDX17-206ENST00000467279 PEG3Q9GZU2 1588 aa44.11■■■■■ 4.65
DDX17-206ENST00000467279 HMGXB3Q12766 1538 aa44.04■■■■■ 4.64
DDX17-206ENST00000467279 BAZ1BQ9UIG0 1483 aaKnown RBP43.88■■■■■ 4.61
DDX17-206ENST00000467279 RSF1Q96T23 1441 aaPredicted RBP43.71■■■■■ 4.59
DDX17-206ENST00000467279 WIZO95785 1651 aa43.68■■■■■ 4.58
DDX17-206ENST00000467279 TOP2AP11388 1531 aaKnown RBP43.3■■■■■ 4.52
DDX17-206ENST00000467279 NESP48681 1621 aa43.04■■■■■ 4.48
DDX17-206ENST00000467279 LAMC3Q9Y6N6 1575 aa43.04■■■■■ 4.48
DDX17-206ENST00000467279 CADPSQ9ULU8 1353 aa42.91■■■■■ 4.46
DDX17-206ENST00000467279 ERCC6Q03468 1493 aa42.89■■■■■ 4.46
DDX17-206ENST00000467279 PDS5BQ9NTI5 1447 aa42.74■■■■■ 4.43
DDX17-206ENST00000467279 CCDC88BA6NC98 1476 aa42.74■■■■■ 4.43
DDX17-206ENST00000467279 CFTRP13569 1480 aa42.69■■■■■ 4.42
DDX17-206ENST00000467279 SUPT5HO00267 1087 aaKnown RBP42.56■■■■■ 4.4
DDX17-206ENST00000467279 KIF21AQ7Z4S6 1674 aa42.56■■■■■ 4.4
DDX17-206ENST00000467279 CUX2O14529 1486 aa42.47■■■■■ 4.39
DDX17-206ENST00000467279 THOC2Q8NI27 1593 aaKnown RBP42.45■■■■■ 4.39
DDX17-206ENST00000467279 FANCD2Q9BXW9 1451 aa42.41■■■■■ 4.38
DDX17-206ENST00000467279 CEP164Q9UPV0 1460 aa42.36■■■■■ 4.37
DDX17-206ENST00000467279 PRDM2Q13029 1718 aa42.36■■■■■ 4.37
DDX17-206ENST00000467279 MRC2Q9UBG0 1479 aa42.3■■■■■ 4.36
DDX17-206ENST00000467279 WDR62O43379 1518 aa42.17■■■■■ 4.34
DDX17-206ENST00000467279 URB2Q14146 1524 aaKnown RBP41.97■■■■■ 4.31
DDX17-206ENST00000467279 ABCC8Q09428 1581 aa41.8■■■■■ 4.28
DDX17-206ENST00000467279 TOPBP1Q92547 1522 aa41.74■■■■■ 4.27
DDX17-206ENST00000467279 DNMBPQ6XZF7 1577 aa41.73■■■■■ 4.27
DDX17-206ENST00000467279 IFT140Q96RY7 1462 aa41.5■■■■■ 4.23
DDX17-206ENST00000467279 CUX1P39880 1505 aa41.44■■■■■ 4.23
DDX17-206ENST00000467279 POLA1P09884 1462 aaPredicted RBP41.4■■■■■ 4.22
DDX17-206ENST00000467279 FGD5Q6ZNL6 1462 aa41.3■■■■■ 4.2
DDX17-206ENST00000467279 TARBP1Q13395 1621 aaKnown RBP41.29■■■■■ 4.2
DDX17-206ENST00000467279 ZNF608Q9ULD9 1512 aaPredicted RBP41.23■■■■■ 4.19
DDX17-206ENST00000467279 WRNQ14191 1432 aaPredicted RBP eCLIP41.23■■■■■ 4.19
DDX17-206ENST00000467279 SOGA1O94964 1423 aa41.21■■■■■ 4.19
DDX17-206ENST00000467279 RAD54L2Q9Y4B4 1467 aa41.17■■■■■ 4.18
DDX17-206ENST00000467279 TOP2BQ02880 1626 aa41.15■■■■■ 4.18
DDX17-206ENST00000467279 BIVM-ERCC5R4GMW8 1640 aa41.14■■■■■ 4.18
DDX17-206ENST00000467279 EIF4G3O43432 1585 aaKnown RBP41.12■■■■■ 4.17
DDX17-206ENST00000467279 SYNJ1O43426 1573 aa41.1■■■■■ 4.17
DDX17-206ENST00000467279 WDR97A6NE52 1622 aa41.05■■■■■ 4.16
DDX17-206ENST00000467279 AQRO60306 1485 aaKnown RBP eCLIP41.01■■■■■ 4.164e-7■■■■□ 21.1
DDX17-206ENST00000467279 DNAJC5Q9H3Z4 198 aa40.99■■■■■ 4.15
DDX17-206ENST00000467279 ABCA10Q8WWZ4 1543 aa40.94■■■■■ 4.14
DDX17-206ENST00000467279 TDRD9Q8NDG6 1382 aaKnown RBP40.94■■■■■ 4.14
DDX17-206ENST00000467279 ABCA5Q8WWZ7 1642 aa40.77■■■■■ 4.12
DDX17-206ENST00000467279 GRIN2BQ13224 1484 aa40.76■■■■■ 4.12
DDX17-206ENST00000467279 GAPVD1Q14C86 1478 aa40.75■■■■■ 4.11
DDX17-206ENST00000467279 SNAPC4Q5SXM2 1469 aa40.67■■■■■ 4.1
DDX17-206ENST00000467279 MAGI1Q96QZ7 1491 aaPredicted RBP40.67■■■■■ 4.1
DDX17-206ENST00000467279 OSCARQ8IYS5 282 aa40.65■■■■■ 4.1
DDX17-206ENST00000467279 PBRM1Q86U86 1689 aa40.65■■■■■ 4.1
DDX17-206ENST00000467279 CHD1O14646 1710 aa40.54■■■■■ 4.08
DDX17-206ENST00000467279 SYNJ2O15056 1496 aa40.49■■■■■ 4.07
DDX17-206ENST00000467279 ERICH3Q5RHP9 1530 aa40.47■■■■■ 4.07
DDX17-206ENST00000467279 FBLN2P98095 1184 aa40.45■■■■■ 4.07
DDX17-206ENST00000467279 CHMP7Q8WUX9 453 aaPredicted RBP40.41■■■■■ 4.06
DDX17-206ENST00000467279 ADAMTS12P58397 1594 aa40.38■■■■■ 4.05
DDX17-206ENST00000467279 KIF27Q86VH2 1401 aa40.37■■■■■ 4.05
DDX17-206ENST00000467279 FHAD1B1AJZ9 1412 aa40.31■■■■■ 4.04
DDX17-206ENST00000467279 TRIM41Q8WV44 630 aa40.24■■■■■ 4.03
DDX17-206ENST00000467279 GRIN2AQ12879 1464 aa40.23■■■■■ 4.03
DDX17-206ENST00000467279 CLASP1Q7Z460 1538 aa40.16■■■■■ 4.02
DDX17-206ENST00000467279 IGF1RP08069 1367 aa40.16■■■■■ 4.02
DDX17-206ENST00000467279 CUL7Q14999 1698 aa40.11■■■■■ 4.01
DDX17-206ENST00000467279 NUP160Q12769 1436 aa40.07■■■■■ 4
DDX17-206ENST00000467279 ARHGEF11O15085 1522 aa40.02■■■■■ 4
DDX17-206ENST00000467279 CEP170Q5SW79 1584 aa40.01■■■■□ 3.99
DDX17-206ENST00000467279 RIMBP3CA6NJZ7 1639 aa40■■■■□ 3.99
DDX17-206ENST00000467279 RIMBP3BA6NNM3 1639 aa40■■■■□ 3.99
DDX17-206ENST00000467279 RIMBP3Q9UFD9 1639 aa40■■■■□ 3.99
DDX17-206ENST00000467279 RUSC2Q8N2Y8 1516 aa39.94■■■■□ 3.98
DDX17-206ENST00000467279 CARMIL1Q5VZK9 1371 aa39.93■■■■□ 3.98
DDX17-206ENST00000467279 CHIC1Q5VXU3 224 aa39.8■■■■□ 3.96
DDX17-206ENST00000467279 SHROOM2Q13796 1616 aa39.76■■■■□ 3.95
DDX17-206ENST00000467279 RAPGEF2Q9Y4G8 1499 aa39.73■■■■□ 3.95
DDX17-206ENST00000467279 ARAP1Q96P48 1450 aa39.7■■■■□ 3.95
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms