RNA–Protein interactions for RNA: ENST00000592062.5

TRMT1-217, Transcript of tRNA methyltransferase 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene TRMT1, Length 2,579 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRMT1-217ENST00000592062 NISCHQ9Y2I1 1504 aa29.67■■■□□ 2.34
TRMT1-217ENST00000592062 SHROOM4Q9ULL8 1493 aa25.52■■□□□ 1.68
TRMT1-217ENST00000592062 SUPT5HO00267 1087 aaKnown RBP25.16■■□□□ 1.62
TRMT1-217ENST00000592062 ZCCHC6Q5VYS8 1495 aaKnown RBP25.15■■□□□ 1.62
TRMT1-217ENST00000592062 CCDC180Q9P1Z9 1646 aa25.1■■□□□ 1.61
TRMT1-217ENST00000592062 CHIC1Q5VXU3 224 aa24.58■■□□□ 1.53
TRMT1-217ENST00000592062 DCAF8L2P0C7V8 631 aa24.56■■□□□ 1.52
TRMT1-217ENST00000592062 MYO15BQ96JP2 1530 aa24.55■■□□□ 1.52
TRMT1-217ENST00000592062 DCAF1Q9Y4B6 1507 aa24.33■■□□□ 1.49
TRMT1-217ENST00000592062 HRCP23327 699 aa24.3■■□□□ 1.48
TRMT1-217ENST00000592062 PCGF6Q9BYE7 350 aa24.1■■□□□ 1.45
TRMT1-217ENST00000592062 LOC105371045A0A1W2PR82 267 aa23.87■■□□□ 1.41
TRMT1-217ENST00000592062 ABCC9O60706 1549 aa23.79■■□□□ 1.4
TRMT1-217ENST00000592062 PPARGC1BQ86YN6 1023 aaKnown RBP23.74■■□□□ 1.39
TRMT1-217ENST00000592062 SCRIBQ14160 1630 aa23.59■■□□□ 1.37
TRMT1-217ENST00000592062 TRIM26Q12899 539 aaPredicted RBP23.59■■□□□ 1.37
TRMT1-217ENST00000592062 RSF1Q96T23 1441 aaPredicted RBP23.59■■□□□ 1.37
TRMT1-217ENST00000592062 TRIM41Q8WV44 630 aa23.42■■□□□ 1.34
TRMT1-217ENST00000592062 RB1CC1Q8TDY2 1594 aa23.38■■□□□ 1.33
TRMT1-217ENST00000592062 FAM9AQ8IZU1 332 aaPredicted RBP23.24■■□□□ 1.31
TRMT1-217ENST00000592062 PELP1Q8IZL8 1130 aaKnown RBP23.22■■□□□ 1.31
TRMT1-217ENST00000592062 ZEB1P37275 1124 aaPredicted RBP23.21■■□□□ 1.31
TRMT1-217ENST00000592062 NACADO15069 1562 aa23.15■■□□□ 1.3
TRMT1-217ENST00000592062 CECR2Q9BXF3 1484 aa23.13■■□□□ 1.29
TRMT1-217ENST00000592062 MROH2BQ7Z745 1585 aa23.09■■□□□ 1.29
TRMT1-217ENST00000592062 EHMT2Q96KQ7 1210 aa23.04■■□□□ 1.28
TRMT1-217ENST00000592062 WIZO95785 1651 aa22.99■■□□□ 1.27
TRMT1-217ENST00000592062 BAZ1AQ9NRL2 1556 aaPredicted RBP22.86■■□□□ 1.25
TRMT1-217ENST00000592062 EIF4G1Q04637 1599 aaKnown RBP22.78■■□□□ 1.24
TRMT1-217ENST00000592062 TOP2AP11388 1531 aaKnown RBP22.63■■□□□ 1.21
TRMT1-217ENST00000592062 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.58■■□□□ 1.21
TRMT1-217ENST00000592062 ABCC8Q09428 1581 aa22.57■■□□□ 1.2
TRMT1-217ENST00000592062 CCER1Q8TC90 406 aaPredicted RBP22.56■■□□□ 1.2
TRMT1-217ENST00000592062 SMARCA4P51532 1647 aa22.55■■□□□ 1.2
TRMT1-217ENST00000592062 SCAF1Q9H7N4 1312 aaKnown RBP22.55■■□□□ 1.2
TRMT1-217ENST00000592062 CCDC88BA6NC98 1476 aa22.54■■□□□ 1.2
TRMT1-217ENST00000592062 SMARCA2P51531 1590 aa22.51■■□□□ 1.19
TRMT1-217ENST00000592062 WRNQ14191 1432 aaPredicted RBP eCLIP22.49■■□□□ 1.19
TRMT1-217ENST00000592062 MYT1Q01538 1121 aa22.47■■□□□ 1.19
TRMT1-217ENST00000592062 CEP162Q5TB80 1403 aa22.44■■□□□ 1.18
TRMT1-217ENST00000592062 SOGA1O94964 1423 aa22.41■■□□□ 1.18
TRMT1-217ENST00000592062 TNIKQ9UKE5 1360 aa22.39■■□□□ 1.18
TRMT1-217ENST00000592062 UNC13AQ9UPW8 1703 aa22.39■■□□□ 1.17
TRMT1-217ENST00000592062 TTBK1Q5TCY1 1321 aaPredicted RBP22.37■■□□□ 1.17
TRMT1-217ENST00000592062 EEA1Q15075 1411 aa22.35■■□□□ 1.17
TRMT1-217ENST00000592062 PABPN1Q86U42 306 aaKnown RBP eCLIP22.35■■□□□ 1.176e-7■■■□□ 15.9
TRMT1-217ENST00000592062 CSRNP3Q8WYN3 585 aa22.32■■□□□ 1.16
TRMT1-217ENST00000592062 RUSC2Q8N2Y8 1516 aa22.28■■□□□ 1.16
TRMT1-217ENST00000592062 UBTFP17480 764 aaKnown RBP22.27■■□□□ 1.16
TRMT1-217ENST00000592062 DIEXFQ68CQ4 756 aaKnown RBP22.26■■□□□ 1.15
TRMT1-217ENST00000592062 ACIN1Q9UKV3 1341 aaKnown RBP22.26■■□□□ 1.15
TRMT1-217ENST00000592062 GOLGA3Q08378 1498 aa22.22■■□□□ 1.15
TRMT1-217ENST00000592062 NEUROD1Q13562 356 aa22.19■■□□□ 1.14
TRMT1-217ENST00000592062 CENPBP07199 599 aaPredicted RBP22.11■■□□□ 1.13
TRMT1-217ENST00000592062 BICRAQ9NZM4 1560 aa22.09■■□□□ 1.13
TRMT1-217ENST00000592062 PEG3Q9GZU2 1588 aa22.08■■□□□ 1.13
TRMT1-217ENST00000592062 CEP164Q9UPV0 1460 aa22.06■■□□□ 1.12
TRMT1-217ENST00000592062 SYNJ1O43426 1573 aa22.04■■□□□ 1.12
TRMT1-217ENST00000592062 KIF21BO75037 1637 aa22.04■■□□□ 1.12
TRMT1-217ENST00000592062 ZNF316A6NFI3 1004 aaPredicted RBP22.03■■□□□ 1.12
TRMT1-217ENST00000592062 GTF3C3Q9Y5Q9 886 aa22■■□□□ 1.11
TRMT1-217ENST00000592062 CLIP1P30622 1438 aa21.97■■□□□ 1.11
TRMT1-217ENST00000592062 HNRNPUL2Q1KMD3 747 aaKnown RBP21.94■■□□□ 1.1
TRMT1-217ENST00000592062 VPS8Q8N3P4 1428 aa21.91■■□□□ 1.1
TRMT1-217ENST00000592062 ATAD2BQ9ULI0 1458 aa21.9■■□□□ 1.1
TRMT1-217ENST00000592062 BAZ1BQ9UIG0 1483 aaKnown RBP21.9■■□□□ 1.1
TRMT1-217ENST00000592062 APLP2Q06481 763 aa21.85■■□□□ 1.09
TRMT1-217ENST00000592062 RAPGEF2Q9Y4G8 1499 aa21.85■■□□□ 1.09
TRMT1-217ENST00000592062 RANGAP1P46060 587 aaPredicted RBP21.76■■□□□ 1.07
TRMT1-217ENST00000592062 YTHDC1Q96MU7 727 aaKnown RBP21.76■■□□□ 1.07
TRMT1-217ENST00000592062 TOP2BQ02880 1626 aa21.74■■□□□ 1.07
TRMT1-217ENST00000592062 MIER1Q8N108 512 aa21.74■■□□□ 1.07
TRMT1-217ENST00000592062 BIVM-ERCC5R4GMW8 1640 aa21.66■■□□□ 1.06
TRMT1-217ENST00000592062 ERICH3Q5RHP9 1530 aa21.63■■□□□ 1.05
TRMT1-217ENST00000592062 PRXQ9BXM0 1461 aa21.6■■□□□ 1.05
TRMT1-217ENST00000592062 ARAP1Q96P48 1450 aa21.58■■□□□ 1.05
TRMT1-217ENST00000592062 CLSPNQ9HAW4 1339 aa21.56■■□□□ 1.04
TRMT1-217ENST00000592062 DHX57Q6P158 1386 aaKnown RBP21.54■■□□□ 1.04
TRMT1-217ENST00000592062 KANK4Q5T7N3 995 aaPredicted RBP21.5■■□□□ 1.03
TRMT1-217ENST00000592062 CUX1P39880 1505 aa21.48■■□□□ 1.03
TRMT1-217ENST00000592062 KIF27Q86VH2 1401 aa21.46■■□□□ 1.03
TRMT1-217ENST00000592062 HMGXB3Q12766 1538 aa21.44■■□□□ 1.02
TRMT1-217ENST00000592062 RRBP1Q9P2E9 1410 aaKnown RBP21.43■■□□□ 1.02
TRMT1-217ENST00000592062 NCAPD3P42695 1498 aa21.42■■□□□ 1.02
TRMT1-217ENST00000592062 ARHGAP35Q9NRY4 1499 aa21.35■■□□□ 1.01
TRMT1-217ENST00000592062 CUX2O14529 1486 aa21.34■■□□□ 1.01
TRMT1-217ENST00000592062 CCNB3Q8WWL7 1395 aa21.34■■□□□ 1.01
TRMT1-217ENST00000592062 CFTRP13569 1480 aa21.33■■□□□ 1
TRMT1-217ENST00000592062 ITGAEP38570 1179 aa21.26■□□□□ 0.99
TRMT1-217ENST00000592062 IGF1RP08069 1367 aa21.19■□□□□ 0.98
TRMT1-217ENST00000592062 RAB3GAP2Q9H2M9 1393 aa21.18■□□□□ 0.98
TRMT1-217ENST00000592062 TIAM1Q13009 1591 aa21.18■□□□□ 0.98
TRMT1-217ENST00000592062 PRDM2Q13029 1718 aa21.18■□□□□ 0.98
TRMT1-217ENST00000592062 CC2D2AQ9P2K1 1620 aa21.17■□□□□ 0.98
TRMT1-217ENST00000592062 MAP3K1Q13233 1512 aa21.16■□□□□ 0.98
TRMT1-217ENST00000592062 DNAJC5BQ9UF47 199 aa21.16■□□□□ 0.98
TRMT1-217ENST00000592062 SUPT16HQ9Y5B9 1047 aaKnown RBP21.14■□□□□ 0.98
TRMT1-217ENST00000592062 MAPKBP1O60336 1514 aa21.13■□□□□ 0.97
TRMT1-217ENST00000592062 CARMIL1Q5VZK9 1371 aa21.11■□□□□ 0.97
TRMT1-217ENST00000592062 SETD5Q9C0A6 1442 aa21.09■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms