RNA–Protein interactions for RNA: ENST00000355135.6

GPM6B-202, Transcript of glycoprotein M6B, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene GPM6B, Length 1,673 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPM6B-202ENST00000355135 NISCHQ9Y2I1 1504 aa32.41■■■□□ 2.78
GPM6B-202ENST00000355135 CCDC180Q9P1Z9 1646 aa28.87■■■□□ 2.21
GPM6B-202ENST00000355135 ABCC9O60706 1549 aa28.27■■■□□ 2.12
GPM6B-202ENST00000355135 RB1CC1Q8TDY2 1594 aa27.2■■□□□ 1.94
GPM6B-202ENST00000355135 NACADO15069 1562 aa27.16■■□□□ 1.94
GPM6B-202ENST00000355135 DCAF8L2P0C7V8 631 aa27.06■■□□□ 1.92
GPM6B-202ENST00000355135 MYO15BQ96JP2 1530 aa26.98■■□□□ 1.91
GPM6B-202ENST00000355135 ZCCHC6Q5VYS8 1495 aaKnown RBP26.98■■□□□ 1.91
GPM6B-202ENST00000355135 DCAF1Q9Y4B6 1507 aa26.83■■□□□ 1.89
GPM6B-202ENST00000355135 UNC13AQ9UPW8 1703 aa26.6■■□□□ 1.85
GPM6B-202ENST00000355135 PABPN1Q86U42 306 aaKnown RBP eCLIP26.4■■□□□ 1.82
GPM6B-202ENST00000355135 BICRAQ9NZM4 1560 aa26.37■■□□□ 1.81
GPM6B-202ENST00000355135 SCRIBQ14160 1630 aa26.3■■□□□ 1.8
GPM6B-202ENST00000355135 SHROOM4Q9ULL8 1493 aa26.12■■□□□ 1.77
GPM6B-202ENST00000355135 DNAJC5BQ9UF47 199 aa26.01■■□□□ 1.75
GPM6B-202ENST00000355135 EIF4G1Q04637 1599 aaKnown RBP25.68■■□□□ 1.7
GPM6B-202ENST00000355135 CC2D2AQ9P2K1 1620 aa25.59■■□□□ 1.69
GPM6B-202ENST00000355135 CECR2Q9BXF3 1484 aa25.42■■□□□ 1.66
GPM6B-202ENST00000355135 SMARCA4P51532 1647 aa25.17■■□□□ 1.62
GPM6B-202ENST00000355135 BAZ1AQ9NRL2 1556 aaPredicted RBP25.13■■□□□ 1.61
GPM6B-202ENST00000355135 NCAPD3P42695 1498 aa25.05■■□□□ 1.6
GPM6B-202ENST00000355135 ATAD2BQ9ULI0 1458 aa25.04■■□□□ 1.6
GPM6B-202ENST00000355135 SMARCA2P51531 1590 aa25.02■■□□□ 1.6
GPM6B-202ENST00000355135 MROH2BQ7Z745 1585 aa24.96■■□□□ 1.59
GPM6B-202ENST00000355135 PEG3Q9GZU2 1588 aa24.94■■□□□ 1.58
GPM6B-202ENST00000355135 HMGXB3Q12766 1538 aa24.92■■□□□ 1.58
GPM6B-202ENST00000355135 BAZ1BQ9UIG0 1483 aaKnown RBP24.83■■□□□ 1.57
GPM6B-202ENST00000355135 WIZO95785 1651 aa24.69■■□□□ 1.54
GPM6B-202ENST00000355135 RSF1Q96T23 1441 aaPredicted RBP24.65■■□□□ 1.54
GPM6B-202ENST00000355135 NESP48681 1621 aa24.44■■□□□ 1.5
GPM6B-202ENST00000355135 TOP2AP11388 1531 aaKnown RBP24.44■■□□□ 1.5
GPM6B-202ENST00000355135 SUPT5HO00267 1087 aaKnown RBP24.42■■□□□ 1.5
GPM6B-202ENST00000355135 LAMC3Q9Y6N6 1575 aa24.41■■□□□ 1.5
GPM6B-202ENST00000355135 ERCC6Q03468 1493 aa24.38■■□□□ 1.49
GPM6B-202ENST00000355135 CADPSQ9ULU8 1353 aa24.31■■□□□ 1.48
GPM6B-202ENST00000355135 PDS5BQ9NTI5 1447 aa24.24■■□□□ 1.47
GPM6B-202ENST00000355135 CUX2O14529 1486 aa24.18■■□□□ 1.46
GPM6B-202ENST00000355135 KIF21AQ7Z4S6 1674 aa24.18■■□□□ 1.46
GPM6B-202ENST00000355135 CFTRP13569 1480 aa24.15■■□□□ 1.46
GPM6B-202ENST00000355135 CCDC88BA6NC98 1476 aa24.14■■□□□ 1.46
GPM6B-202ENST00000355135 THOC2Q8NI27 1593 aaKnown RBP24.12■■□□□ 1.45
GPM6B-202ENST00000355135 FANCD2Q9BXW9 1451 aa24.02■■□□□ 1.44
GPM6B-202ENST00000355135 CEP164Q9UPV0 1460 aa24■■□□□ 1.43
GPM6B-202ENST00000355135 PRDM2Q13029 1718 aa24■■□□□ 1.43
GPM6B-202ENST00000355135 MRC2Q9UBG0 1479 aa23.99■■□□□ 1.43
GPM6B-202ENST00000355135 WDR62O43379 1518 aa23.92■■□□□ 1.42
GPM6B-202ENST00000355135 URB2Q14146 1524 aaKnown RBP23.79■■□□□ 1.4
GPM6B-202ENST00000355135 ABCC8Q09428 1581 aa23.65■■□□□ 1.38
GPM6B-202ENST00000355135 TOPBP1Q92547 1522 aa23.64■■□□□ 1.37
GPM6B-202ENST00000355135 DNMBPQ6XZF7 1577 aa23.61■■□□□ 1.37
GPM6B-202ENST00000355135 DNAJC5Q9H3Z4 198 aa23.51■■□□□ 1.35
GPM6B-202ENST00000355135 IFT140Q96RY7 1462 aa23.51■■□□□ 1.35
GPM6B-202ENST00000355135 CHIC1Q5VXU3 224 aa23.48■■□□□ 1.35
GPM6B-202ENST00000355135 POLA1P09884 1462 aaPredicted RBP23.42■■□□□ 1.34
GPM6B-202ENST00000355135 CUX1P39880 1505 aa23.42■■□□□ 1.34
GPM6B-202ENST00000355135 TARBP1Q13395 1621 aaKnown RBP23.39■■□□□ 1.33
GPM6B-202ENST00000355135 ZNF608Q9ULD9 1512 aaPredicted RBP23.39■■□□□ 1.33
GPM6B-202ENST00000355135 FGD5Q6ZNL6 1462 aa23.36■■□□□ 1.33
GPM6B-202ENST00000355135 SOGA1O94964 1423 aa23.33■■□□□ 1.32
GPM6B-202ENST00000355135 RAD54L2Q9Y4B4 1467 aa23.31■■□□□ 1.32
GPM6B-202ENST00000355135 EIF4G3O43432 1585 aaKnown RBP23.31■■□□□ 1.32
GPM6B-202ENST00000355135 AQRO60306 1485 aaKnown RBP eCLIP23.25■■□□□ 1.31
GPM6B-202ENST00000355135 WRNQ14191 1432 aaPredicted RBP eCLIP23.24■■□□□ 1.31
GPM6B-202ENST00000355135 WDR97A6NE52 1622 aa23.23■■□□□ 1.31
GPM6B-202ENST00000355135 BIVM-ERCC5R4GMW8 1640 aa23.22■■□□□ 1.31
GPM6B-202ENST00000355135 TOP2BQ02880 1626 aa23.21■■□□□ 1.31
GPM6B-202ENST00000355135 TDRD9Q8NDG6 1382 aaKnown RBP23.19■■□□□ 1.3
GPM6B-202ENST00000355135 SYNJ1O43426 1573 aa23.19■■□□□ 1.3
GPM6B-202ENST00000355135 OSCARQ8IYS5 282 aa23.15■■□□□ 1.3
GPM6B-202ENST00000355135 ABCA10Q8WWZ4 1543 aa23.14■■□□□ 1.29
GPM6B-202ENST00000355135 GRIN2BQ13224 1484 aa23.08■■□□□ 1.28
GPM6B-202ENST00000355135 GAPVD1Q14C86 1478 aa23.06■■□□□ 1.28
GPM6B-202ENST00000355135 ABCA5Q8WWZ7 1642 aa23.06■■□□□ 1.28
GPM6B-202ENST00000355135 CHD1O14646 1710 aa23.05■■□□□ 1.28
GPM6B-202ENST00000355135 SNAPC4Q5SXM2 1469 aa23.04■■□□□ 1.28
GPM6B-202ENST00000355135 PBRM1Q86U86 1689 aa23.04■■□□□ 1.28
GPM6B-202ENST00000355135 MAGI1Q96QZ7 1491 aaPredicted RBP23.03■■□□□ 1.28
GPM6B-202ENST00000355135 FBLN2P98095 1184 aa22.97■■□□□ 1.27
GPM6B-202ENST00000355135 TRIM41Q8WV44 630 aa22.94■■□□□ 1.26
GPM6B-202ENST00000355135 SYNJ2O15056 1496 aa22.93■■□□□ 1.26
GPM6B-202ENST00000355135 CHMP7Q8WUX9 453 aaPredicted RBP22.92■■□□□ 1.26
GPM6B-202ENST00000355135 ERICH3Q5RHP9 1530 aa22.87■■□□□ 1.25
GPM6B-202ENST00000355135 ADAMTS12P58397 1594 aa22.84■■□□□ 1.25
GPM6B-202ENST00000355135 FHAD1B1AJZ9 1412 aa22.8■■□□□ 1.24
GPM6B-202ENST00000355135 RIMBP3CA6NJZ7 1639 aa22.79■■□□□ 1.24
GPM6B-202ENST00000355135 RIMBP3BA6NNM3 1639 aa22.79■■□□□ 1.24
GPM6B-202ENST00000355135 RIMBP3Q9UFD9 1639 aa22.79■■□□□ 1.24
GPM6B-202ENST00000355135 CLASP1Q7Z460 1538 aa22.79■■□□□ 1.24
GPM6B-202ENST00000355135 ARHGEF11O15085 1522 aa22.78■■□□□ 1.24
GPM6B-202ENST00000355135 KIF27Q86VH2 1401 aa22.77■■□□□ 1.24
GPM6B-202ENST00000355135 GRIN2AQ12879 1464 aa22.77■■□□□ 1.24
GPM6B-202ENST00000355135 NUP160Q12769 1436 aa22.68■■□□□ 1.22
GPM6B-202ENST00000355135 IGF1RP08069 1367 aa22.68■■□□□ 1.22
GPM6B-202ENST00000355135 CEP170Q5SW79 1584 aa22.66■■□□□ 1.22
GPM6B-202ENST00000355135 CUL7Q14999 1698 aa22.65■■□□□ 1.22
GPM6B-202ENST00000355135 ARAP1Q96P48 1450 aa22.58■■□□□ 1.21
GPM6B-202ENST00000355135 LOC105371045A0A1W2PR82 267 aa22.57■■□□□ 1.2
GPM6B-202ENST00000355135 CYB5RLQ6IPT4 315 aa22.55■■□□□ 1.2
GPM6B-202ENST00000355135 CARMIL1Q5VZK9 1371 aa22.54■■□□□ 1.2
GPM6B-202ENST00000355135 FAM9AQ8IZU1 332 aaPredicted RBP22.54■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms