RNA–Protein interactions for RNA: ENST00000398361.7

GPM6B-204, Transcript of glycoprotein M6B, humanhuman

TSL 2 BASIC

Gene GPM6B, Length 1,033 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPM6B-204ENST00000398361 NISCHQ9Y2I1 1504 aa46.49■■■■■ 5.03
GPM6B-204ENST00000398361 CCDC180Q9P1Z9 1646 aa41.71■■■■■ 4.27
GPM6B-204ENST00000398361 ABCC9O60706 1549 aa41.34■■■■■ 4.21
GPM6B-204ENST00000398361 RB1CC1Q8TDY2 1594 aa39.54■■■■□ 3.92
GPM6B-204ENST00000398361 NACADO15069 1562 aa39.32■■■■□ 3.88
GPM6B-204ENST00000398361 DCAF8L2P0C7V8 631 aa39.08■■■■□ 3.85
GPM6B-204ENST00000398361 MYO15BQ96JP2 1530 aa38.84■■■■□ 3.81
GPM6B-204ENST00000398361 UNC13AQ9UPW8 1703 aa38.72■■■■□ 3.79
GPM6B-204ENST00000398361 ZCCHC6Q5VYS8 1495 aaKnown RBP38.6■■■■□ 3.77
GPM6B-204ENST00000398361 PABPN1Q86U42 306 aaKnown RBP eCLIP38.48■■■■□ 3.75
GPM6B-204ENST00000398361 DNAJC5BQ9UF47 199 aa38.45■■■■□ 3.75
GPM6B-204ENST00000398361 DCAF1Q9Y4B6 1507 aa38.44■■■■□ 3.74
GPM6B-204ENST00000398361 BICRAQ9NZM4 1560 aa38.33■■■■□ 3.73
GPM6B-204ENST00000398361 SCRIBQ14160 1630 aa37.97■■■■□ 3.67
GPM6B-204ENST00000398361 SHROOM4Q9ULL8 1493 aa37.88■■■■□ 3.65
GPM6B-204ENST00000398361 CC2D2AQ9P2K1 1620 aa37.4■■■■□ 3.58
GPM6B-204ENST00000398361 EIF4G1Q04637 1599 aaKnown RBP37.38■■■■□ 3.57
GPM6B-204ENST00000398361 CECR2Q9BXF3 1484 aa37.22■■■■□ 3.55
GPM6B-204ENST00000398361 SMARCA4P51532 1647 aa36.26■■■■□ 3.39
GPM6B-204ENST00000398361 NCAPD3P42695 1498 aa36.24■■■■□ 3.39
GPM6B-204ENST00000398361 ATAD2BQ9ULI0 1458 aa36.16■■■■□ 3.38
GPM6B-204ENST00000398361 SMARCA2P51531 1590 aa36.14■■■■□ 3.38
GPM6B-204ENST00000398361 BAZ1AQ9NRL2 1556 aaPredicted RBP36.1■■■■□ 3.37
GPM6B-204ENST00000398361 HMGXB3Q12766 1538 aa36.04■■■■□ 3.36
GPM6B-204ENST00000398361 DNAJC5Q9H3Z4 198 aa36.04■■■■□ 3.36
GPM6B-204ENST00000398361 PEG3Q9GZU2 1588 aa35.89■■■■□ 3.34
GPM6B-204ENST00000398361 BAZ1BQ9UIG0 1483 aaKnown RBP35.86■■■■□ 3.33
GPM6B-204ENST00000398361 MROH2BQ7Z745 1585 aa35.81■■■■□ 3.32
GPM6B-204ENST00000398361 ERCC6Q03468 1493 aa35.71■■■■□ 3.31
GPM6B-204ENST00000398361 NESP48681 1621 aa35.58■■■■□ 3.29
GPM6B-204ENST00000398361 CUX2O14529 1486 aa35.55■■■■□ 3.28
GPM6B-204ENST00000398361 WIZO95785 1651 aa35.46■■■■□ 3.27
GPM6B-204ENST00000398361 LAMC3Q9Y6N6 1575 aa35.44■■■■□ 3.26
GPM6B-204ENST00000398361 RSF1Q96T23 1441 aaPredicted RBP35.29■■■■□ 3.24
GPM6B-204ENST00000398361 KIF21AQ7Z4S6 1674 aa35.24■■■■□ 3.23
GPM6B-204ENST00000398361 THOC2Q8NI27 1593 aaKnown RBP35.23■■■■□ 3.23
GPM6B-204ENST00000398361 PDS5BQ9NTI5 1447 aa35.18■■■■□ 3.22
GPM6B-204ENST00000398361 CADPSQ9ULU8 1353 aa35.13■■■■□ 3.21
GPM6B-204ENST00000398361 TOP2AP11388 1531 aaKnown RBP35.01■■■■□ 3.2
GPM6B-204ENST00000398361 MRC2Q9UBG0 1479 aa34.88■■■■□ 3.17
GPM6B-204ENST00000398361 CFTRP13569 1480 aa34.81■■■■□ 3.16
GPM6B-204ENST00000398361 CEP164Q9UPV0 1460 aa34.8■■■■□ 3.16
GPM6B-204ENST00000398361 WDR62O43379 1518 aa34.8■■■■□ 3.16
GPM6B-204ENST00000398361 FANCD2Q9BXW9 1451 aa34.77■■■■□ 3.16
GPM6B-204ENST00000398361 PRDM2Q13029 1718 aa34.67■■■■□ 3.14
GPM6B-204ENST00000398361 CCDC88BA6NC98 1476 aa34.57■■■■□ 3.12
GPM6B-204ENST00000398361 URB2Q14146 1524 aaKnown RBP34.45■■■■□ 3.11
GPM6B-204ENST00000398361 SUPT5HO00267 1087 aaKnown RBP34.42■■■■□ 3.1
GPM6B-204ENST00000398361 TOPBP1Q92547 1522 aa34.14■■■■□ 3.06
GPM6B-204ENST00000398361 ABCC8Q09428 1581 aa34.12■■■■□ 3.05
GPM6B-204ENST00000398361 IFT140Q96RY7 1462 aa34.09■■■■□ 3.05
GPM6B-204ENST00000398361 DNMBPQ6XZF7 1577 aa34.08■■■■□ 3.05
GPM6B-204ENST00000398361 ZNF608Q9ULD9 1512 aaPredicted RBP33.97■■■■□ 3.03
GPM6B-204ENST00000398361 OSCARQ8IYS5 282 aa33.93■■■■□ 3.02
GPM6B-204ENST00000398361 EIF4G3O43432 1585 aaKnown RBP33.87■■■■□ 3.01
GPM6B-204ENST00000398361 TARBP1Q13395 1621 aaKnown RBP33.84■■■■□ 3.01
GPM6B-204ENST00000398361 POLA1P09884 1462 aaPredicted RBP33.8■■■■□ 3
GPM6B-204ENST00000398361 TRIM41Q8WV44 630 aa33.78■■■■□ 3
GPM6B-204ENST00000398361 AQRO60306 1485 aaKnown RBP eCLIP33.69■■■□□ 2.98
GPM6B-204ENST00000398361 RAD54L2Q9Y4B4 1467 aa33.66■■■□□ 2.98
GPM6B-204ENST00000398361 CUX1P39880 1505 aa33.64■■■□□ 2.98
GPM6B-204ENST00000398361 SOGA1O94964 1423 aa33.64■■■□□ 2.98
GPM6B-204ENST00000398361 FGD5Q6ZNL6 1462 aa33.63■■■□□ 2.97
GPM6B-204ENST00000398361 CHD1O14646 1710 aa33.62■■■□□ 2.97
GPM6B-204ENST00000398361 WDR97A6NE52 1622 aa33.57■■■□□ 2.97
GPM6B-204ENST00000398361 RIMBP3CA6NJZ7 1639 aa33.53■■■□□ 2.96
GPM6B-204ENST00000398361 RIMBP3BA6NNM3 1639 aa33.53■■■□□ 2.96
GPM6B-204ENST00000398361 RIMBP3Q9UFD9 1639 aa33.53■■■□□ 2.96
GPM6B-204ENST00000398361 TDRD9Q8NDG6 1382 aaKnown RBP33.51■■■□□ 2.96
GPM6B-204ENST00000398361 FBLN2P98095 1184 aa33.42■■■□□ 2.94
GPM6B-204ENST00000398361 ARHGEF11O15085 1522 aa33.41■■■□□ 2.94
GPM6B-204ENST00000398361 SNAPC4Q5SXM2 1469 aa33.39■■■□□ 2.94
GPM6B-204ENST00000398361 GRIN2BQ13224 1484 aa33.34■■■□□ 2.93
GPM6B-204ENST00000398361 PBRM1Q86U86 1689 aa33.33■■■□□ 2.93
GPM6B-204ENST00000398361 MAGI1Q96QZ7 1491 aaPredicted RBP33.33■■■□□ 2.93
GPM6B-204ENST00000398361 ABCA10Q8WWZ4 1543 aa33.28■■■□□ 2.92
GPM6B-204ENST00000398361 WRNQ14191 1432 aaPredicted RBP eCLIP33.28■■■□□ 2.92
GPM6B-204ENST00000398361 GAPVD1Q14C86 1478 aa33.25■■■□□ 2.91
GPM6B-204ENST00000398361 BIVM-ERCC5R4GMW8 1640 aa33.25■■■□□ 2.91
GPM6B-204ENST00000398361 ABCA5Q8WWZ7 1642 aa33.24■■■□□ 2.91
GPM6B-204ENST00000398361 CHMP7Q8WUX9 453 aaPredicted RBP33.23■■■□□ 2.91
GPM6B-204ENST00000398361 TOP2BQ02880 1626 aa33.22■■■□□ 2.91
GPM6B-204ENST00000398361 SYNJ2O15056 1496 aa33.21■■■□□ 2.91
GPM6B-204ENST00000398361 SYNJ1O43426 1573 aa33.21■■■□□ 2.91
GPM6B-204ENST00000398361 CLASP1Q7Z460 1538 aa33.17■■■□□ 2.9
GPM6B-204ENST00000398361 CYB5RLQ6IPT4 315 aa33.1■■■□□ 2.89
GPM6B-204ENST00000398361 ARAP1Q96P48 1450 aa33.09■■■□□ 2.89
GPM6B-204ENST00000398361 ADAMTS12P58397 1594 aa32.97■■■□□ 2.87
GPM6B-204ENST00000398361 GRIN2AQ12879 1464 aa32.91■■■□□ 2.86
GPM6B-204ENST00000398361 ERICH3Q5RHP9 1530 aa32.88■■■□□ 2.85
GPM6B-204ENST00000398361 FHAD1B1AJZ9 1412 aa32.85■■■□□ 2.85
GPM6B-204ENST00000398361 CEP170Q5SW79 1584 aa32.8■■■□□ 2.84
GPM6B-204ENST00000398361 NUP160Q12769 1436 aa32.77■■■□□ 2.84
GPM6B-204ENST00000398361 TRHP20396 242 aaPredicted RBP32.67■■■□□ 2.82
GPM6B-204ENST00000398361 SHROOM2Q13796 1616 aa32.66■■■□□ 2.82
GPM6B-204ENST00000398361 ERCC6L2Q5T890 1561 aa32.64■■■□□ 2.82
GPM6B-204ENST00000398361 KIF27Q86VH2 1401 aa32.59■■■□□ 2.81
GPM6B-204ENST00000398361 CUL7Q14999 1698 aa32.51■■■□□ 2.79
GPM6B-204ENST00000398361 RUSC2Q8N2Y8 1516 aa32.5■■■□□ 2.79
GPM6B-204ENST00000398361 IGF1RP08069 1367 aa32.45■■■□□ 2.78
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms