RNA–Protein interactions for RNA: ENST00000221504.12

TRMT1-201, Transcript of tRNA methyltransferase 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRMT1, Length 2,179 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRMT1-201ENST00000221504 NISCHQ9Y2I1 1504 aa31.73■■■□□ 2.67
TRMT1-201ENST00000221504 CCDC180Q9P1Z9 1646 aa27.21■■□□□ 1.95
TRMT1-201ENST00000221504 ZCCHC6Q5VYS8 1495 aaKnown RBP26.82■■□□□ 1.88
TRMT1-201ENST00000221504 SHROOM4Q9ULL8 1493 aa26.64■■□□□ 1.86
TRMT1-201ENST00000221504 DCAF1Q9Y4B6 1507 aa26.15■■□□□ 1.78
TRMT1-201ENST00000221504 DCAF8L2P0C7V8 631 aa26.1■■□□□ 1.77
TRMT1-201ENST00000221504 SUPT5HO00267 1087 aaKnown RBP26.01■■□□□ 1.75
TRMT1-201ENST00000221504 MYO15BQ96JP2 1530 aa25.51■■□□□ 1.67
TRMT1-201ENST00000221504 SCRIBQ14160 1630 aa25.29■■□□□ 1.64
TRMT1-201ENST00000221504 ABCC9O60706 1549 aa25.27■■□□□ 1.64
TRMT1-201ENST00000221504 CHIC1Q5VXU3 224 aa25.27■■□□□ 1.64
TRMT1-201ENST00000221504 NACADO15069 1562 aa25.17■■□□□ 1.62
TRMT1-201ENST00000221504 RSF1Q96T23 1441 aaPredicted RBP24.97■■□□□ 1.59
TRMT1-201ENST00000221504 RB1CC1Q8TDY2 1594 aa24.78■■□□□ 1.56
TRMT1-201ENST00000221504 CECR2Q9BXF3 1484 aa24.67■■□□□ 1.54
TRMT1-201ENST00000221504 MROH2BQ7Z745 1585 aa24.61■■□□□ 1.53
TRMT1-201ENST00000221504 WIZO95785 1651 aa24.46■■□□□ 1.51
TRMT1-201ENST00000221504 BAZ1AQ9NRL2 1556 aaPredicted RBP24.42■■□□□ 1.5
TRMT1-201ENST00000221504 LOC105371045A0A1W2PR82 267 aa24.41■■□□□ 1.5
TRMT1-201ENST00000221504 UNC13AQ9UPW8 1703 aa24.4■■□□□ 1.5
TRMT1-201ENST00000221504 TRIM41Q8WV44 630 aa24.32■■□□□ 1.48
TRMT1-201ENST00000221504 SMARCA4P51532 1647 aa24.23■■□□□ 1.47
TRMT1-201ENST00000221504 TOP2AP11388 1531 aaKnown RBP24.15■■□□□ 1.46
TRMT1-201ENST00000221504 PCGF6Q9BYE7 350 aa24.15■■□□□ 1.46
TRMT1-201ENST00000221504 EIF4G1Q04637 1599 aaKnown RBP24.13■■□□□ 1.45
TRMT1-201ENST00000221504 BICRAQ9NZM4 1560 aa24.08■■□□□ 1.45
TRMT1-201ENST00000221504 HRCP23327 699 aa24.08■■□□□ 1.44
TRMT1-201ENST00000221504 FAM9AQ8IZU1 332 aaPredicted RBP24■■□□□ 1.43
TRMT1-201ENST00000221504 SMARCA2P51531 1590 aa23.98■■□□□ 1.43
TRMT1-201ENST00000221504 CCDC88BA6NC98 1476 aa23.97■■□□□ 1.43
TRMT1-201ENST00000221504 PABPN1Q86U42 306 aaKnown RBP eCLIP23.95■■□□□ 1.426e-7■■■□□ 15.9
TRMT1-201ENST00000221504 TRIM26Q12899 539 aaPredicted RBP23.86■■□□□ 1.41
TRMT1-201ENST00000221504 PEG3Q9GZU2 1588 aa23.85■■□□□ 1.41
TRMT1-201ENST00000221504 ABCC8Q09428 1581 aa23.79■■□□□ 1.4
TRMT1-201ENST00000221504 EHMT2Q96KQ7 1210 aa23.71■■□□□ 1.39
TRMT1-201ENST00000221504 ATAD2BQ9ULI0 1458 aa23.63■■□□□ 1.37
TRMT1-201ENST00000221504 DNAJC5BQ9UF47 199 aa23.62■■□□□ 1.37
TRMT1-201ENST00000221504 BAZ1BQ9UIG0 1483 aaKnown RBP23.55■■□□□ 1.36
TRMT1-201ENST00000221504 SOGA1O94964 1423 aa23.5■■□□□ 1.35
TRMT1-201ENST00000221504 EEA1Q15075 1411 aa23.49■■□□□ 1.35
TRMT1-201ENST00000221504 PPARGC1BQ86YN6 1023 aaKnown RBP23.48■■□□□ 1.35
TRMT1-201ENST00000221504 WRNQ14191 1432 aaPredicted RBP eCLIP23.47■■□□□ 1.35
TRMT1-201ENST00000221504 RUSC2Q8N2Y8 1516 aa23.38■■□□□ 1.33
TRMT1-201ENST00000221504 SYNJ1O43426 1573 aa23.37■■□□□ 1.33
TRMT1-201ENST00000221504 CSRNP3Q8WYN3 585 aa23.36■■□□□ 1.33
TRMT1-201ENST00000221504 TNIKQ9UKE5 1360 aa23.34■■□□□ 1.33
TRMT1-201ENST00000221504 CEP162Q5TB80 1403 aa23.32■■□□□ 1.32
TRMT1-201ENST00000221504 HMGXB3Q12766 1538 aa23.28■■□□□ 1.32
TRMT1-201ENST00000221504 ZEB1P37275 1124 aaPredicted RBP23.27■■□□□ 1.32
TRMT1-201ENST00000221504 GOLGA3Q08378 1498 aa23.26■■□□□ 1.31
TRMT1-201ENST00000221504 NCAPD3P42695 1498 aa23.25■■□□□ 1.31
TRMT1-201ENST00000221504 KIF21BO75037 1637 aa23.18■■□□□ 1.3
TRMT1-201ENST00000221504 UBTFP17480 764 aaKnown RBP23.18■■□□□ 1.3
TRMT1-201ENST00000221504 CEP164Q9UPV0 1460 aa23.17■■□□□ 1.3
TRMT1-201ENST00000221504 TOP2BQ02880 1626 aa23.16■■□□□ 1.3
TRMT1-201ENST00000221504 BIVM-ERCC5R4GMW8 1640 aa23.11■■□□□ 1.29
TRMT1-201ENST00000221504 CFTRP13569 1480 aa22.98■■□□□ 1.27
TRMT1-201ENST00000221504 RAPGEF2Q9Y4G8 1499 aa22.97■■□□□ 1.27
TRMT1-201ENST00000221504 CLIP1P30622 1438 aa22.95■■□□□ 1.26
TRMT1-201ENST00000221504 CUX1P39880 1505 aa22.94■■□□□ 1.26
TRMT1-201ENST00000221504 TTBK1Q5TCY1 1321 aaPredicted RBP22.91■■□□□ 1.26
TRMT1-201ENST00000221504 PRDM2Q13029 1718 aa22.89■■□□□ 1.25
TRMT1-201ENST00000221504 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.86■■□□□ 1.25
TRMT1-201ENST00000221504 ERICH3Q5RHP9 1530 aa22.86■■□□□ 1.25
TRMT1-201ENST00000221504 VPS8Q8N3P4 1428 aa22.85■■□□□ 1.25
TRMT1-201ENST00000221504 PRXQ9BXM0 1461 aa22.84■■□□□ 1.25
TRMT1-201ENST00000221504 CCER1Q8TC90 406 aaPredicted RBP22.83■■□□□ 1.24
TRMT1-201ENST00000221504 KIF27Q86VH2 1401 aa22.78■■□□□ 1.24
TRMT1-201ENST00000221504 CC2D2AQ9P2K1 1620 aa22.75■■□□□ 1.23
TRMT1-201ENST00000221504 CADPSQ9ULU8 1353 aa22.74■■□□□ 1.23
TRMT1-201ENST00000221504 RANGAP1P46060 587 aaPredicted RBP22.66■■□□□ 1.22
TRMT1-201ENST00000221504 APLP2Q06481 763 aa22.65■■□□□ 1.22
TRMT1-201ENST00000221504 ARAP1Q96P48 1450 aa22.63■■□□□ 1.21
TRMT1-201ENST00000221504 CUX2O14529 1486 aa22.58■■□□□ 1.21
TRMT1-201ENST00000221504 FGD5Q6ZNL6 1462 aa22.56■■□□□ 1.2
TRMT1-201ENST00000221504 FANCD2Q9BXW9 1451 aa22.52■■□□□ 1.2
TRMT1-201ENST00000221504 IGF1RP08069 1367 aa22.51■■□□□ 1.19
TRMT1-201ENST00000221504 HNRNPUL2Q1KMD3 747 aaKnown RBP22.48■■□□□ 1.19
TRMT1-201ENST00000221504 ARHGAP35Q9NRY4 1499 aa22.47■■□□□ 1.19
TRMT1-201ENST00000221504 DNMBPQ6XZF7 1577 aa22.43■■□□□ 1.18
TRMT1-201ENST00000221504 CARMIL1Q5VZK9 1371 aa22.42■■□□□ 1.18
TRMT1-201ENST00000221504 NESP48681 1621 aa22.37■■□□□ 1.17
TRMT1-201ENST00000221504 KANK4Q5T7N3 995 aaPredicted RBP22.37■■□□□ 1.17
TRMT1-201ENST00000221504 TOPBP1Q92547 1522 aa22.36■■□□□ 1.17
TRMT1-201ENST00000221504 ABCA10Q8WWZ4 1543 aa22.34■■□□□ 1.17
TRMT1-201ENST00000221504 POLA1P09884 1462 aaPredicted RBP22.33■■□□□ 1.17
TRMT1-201ENST00000221504 LAMC3Q9Y6N6 1575 aa22.32■■□□□ 1.16
TRMT1-201ENST00000221504 RAD54L2Q9Y4B4 1467 aa22.31■■□□□ 1.16
TRMT1-201ENST00000221504 RRBP1Q9P2E9 1410 aaKnown RBP22.29■■□□□ 1.16
TRMT1-201ENST00000221504 MAP3K1Q13233 1512 aa22.24■■□□□ 1.15
TRMT1-201ENST00000221504 DIEXFQ68CQ4 756 aaKnown RBP22.24■■□□□ 1.15
TRMT1-201ENST00000221504 CUL7Q14999 1698 aa22.22■■□□□ 1.15
TRMT1-201ENST00000221504 TIAM1Q13009 1591 aa22.22■■□□□ 1.15
TRMT1-201ENST00000221504 URB2Q14146 1524 aaKnown RBP22.21■■□□□ 1.15
TRMT1-201ENST00000221504 WDR97A6NE52 1622 aa22.2■■□□□ 1.14
TRMT1-201ENST00000221504 CCNB3Q8WWL7 1395 aa22.18■■□□□ 1.14
TRMT1-201ENST00000221504 ZNF316A6NFI3 1004 aaPredicted RBP22.18■■□□□ 1.14
TRMT1-201ENST00000221504 FHAD1B1AJZ9 1412 aa22.17■■□□□ 1.14
TRMT1-201ENST00000221504 CLSPNQ9HAW4 1339 aa22.14■■□□□ 1.13
TRMT1-201ENST00000221504 PDS5BQ9NTI5 1447 aa22.13■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms