RNA–Protein interactions for RNA: ENST00000479734.1

DDX17-209, Transcript of DEAD-box helicase 17, humanhuman

TSL 4

Gene DDX17, Length 441 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX17-209ENST00000479734 NISCHQ9Y2I1 1504 aa38.28■■■■□ 3.72
DDX17-209ENST00000479734 CCDC180Q9P1Z9 1646 aa33.97■■■■□ 3.03
DDX17-209ENST00000479734 ABCC9O60706 1549 aa33.63■■■□□ 2.97
DDX17-209ENST00000479734 DCAF8L2P0C7V8 631 aa32.4■■■□□ 2.78
DDX17-209ENST00000479734 RB1CC1Q8TDY2 1594 aa32.16■■■□□ 2.74
DDX17-209ENST00000479734 NACADO15069 1562 aa32.06■■■□□ 2.72
DDX17-209ENST00000479734 ZCCHC6Q5VYS8 1495 aaKnown RBP31.81■■■□□ 2.68
DDX17-209ENST00000479734 MYO15BQ96JP2 1530 aa31.73■■■□□ 2.67
DDX17-209ENST00000479734 DCAF1Q9Y4B6 1507 aa31.56■■■□□ 2.64
DDX17-209ENST00000479734 PABPN1Q86U42 306 aaKnown RBP eCLIP31.5■■■□□ 2.63
DDX17-209ENST00000479734 UNC13AQ9UPW8 1703 aa31.32■■■□□ 2.6
DDX17-209ENST00000479734 SCRIBQ14160 1630 aa31.16■■■□□ 2.58
DDX17-209ENST00000479734 BICRAQ9NZM4 1560 aa31.14■■■□□ 2.58
DDX17-209ENST00000479734 DNAJC5BQ9UF47 199 aa31.01■■■□□ 2.55
DDX17-209ENST00000479734 SHROOM4Q9ULL8 1493 aa30.74■■■□□ 2.51
DDX17-209ENST00000479734 EIF4G1Q04637 1599 aaKnown RBP30.38■■■□□ 2.45
DDX17-209ENST00000479734 CC2D2AQ9P2K1 1620 aa30.31■■■□□ 2.44
DDX17-209ENST00000479734 CECR2Q9BXF3 1484 aa30.19■■■□□ 2.42
DDX17-209ENST00000479734 SMARCA4P51532 1647 aa29.71■■■□□ 2.35
DDX17-209ENST00000479734 BAZ1AQ9NRL2 1556 aaPredicted RBP29.68■■■□□ 2.34
DDX17-209ENST00000479734 ATAD2BQ9ULI0 1458 aa29.63■■■□□ 2.33
DDX17-209ENST00000479734 NCAPD3P42695 1498 aa29.61■■■□□ 2.33
DDX17-209ENST00000479734 SMARCA2P51531 1590 aa29.56■■■□□ 2.32
DDX17-209ENST00000479734 MROH2BQ7Z745 1585 aa29.53■■■□□ 2.32
DDX17-209ENST00000479734 BAZ1BQ9UIG0 1483 aaKnown RBP29.42■■■□□ 2.3
DDX17-209ENST00000479734 HMGXB3Q12766 1538 aa29.4■■■□□ 2.3
DDX17-209ENST00000479734 PEG3Q9GZU2 1588 aa29.34■■■□□ 2.29
DDX17-209ENST00000479734 WIZO95785 1651 aa29.19■■■□□ 2.26
DDX17-209ENST00000479734 RSF1Q96T23 1441 aaPredicted RBP29.16■■■□□ 2.26
DDX17-209ENST00000479734 ERCC6Q03468 1493 aa29.03■■■□□ 2.24
DDX17-209ENST00000479734 NESP48681 1621 aa29.02■■■□□ 2.24
DDX17-209ENST00000479734 TOP2AP11388 1531 aaKnown RBP28.84■■■□□ 2.21
DDX17-209ENST00000479734 LAMC3Q9Y6N6 1575 aa28.83■■■□□ 2.21
DDX17-209ENST00000479734 CADPSQ9ULU8 1353 aa28.8■■■□□ 2.2
DDX17-209ENST00000479734 PDS5BQ9NTI5 1447 aa28.74■■■□□ 2.19
DDX17-209ENST00000479734 CUX2O14529 1486 aa28.63■■■□□ 2.17
DDX17-209ENST00000479734 CCDC88BA6NC98 1476 aa28.58■■■□□ 2.17
DDX17-209ENST00000479734 KIF21AQ7Z4S6 1674 aa28.58■■■□□ 2.16
DDX17-209ENST00000479734 SUPT5HO00267 1087 aaKnown RBP28.56■■■□□ 2.16
DDX17-209ENST00000479734 CFTRP13569 1480 aa28.54■■■□□ 2.16
DDX17-209ENST00000479734 FANCD2Q9BXW9 1451 aa28.48■■■□□ 2.15
DDX17-209ENST00000479734 THOC2Q8NI27 1593 aaKnown RBP28.48■■■□□ 2.15
DDX17-209ENST00000479734 CEP164Q9UPV0 1460 aa28.45■■■□□ 2.14
DDX17-209ENST00000479734 MRC2Q9UBG0 1479 aa28.42■■■□□ 2.14
DDX17-209ENST00000479734 WDR62O43379 1518 aa28.26■■■□□ 2.11
DDX17-209ENST00000479734 DNAJC5Q9H3Z4 198 aa28.21■■■□□ 2.11
DDX17-209ENST00000479734 PRDM2Q13029 1718 aa28.17■■■□□ 2.1
DDX17-209ENST00000479734 URB2Q14146 1524 aaKnown RBP28.17■■■□□ 2.1
DDX17-209ENST00000479734 TOPBP1Q92547 1522 aa27.97■■■□□ 2.07
DDX17-209ENST00000479734 ABCC8Q09428 1581 aa27.94■■■□□ 2.06
DDX17-209ENST00000479734 DNMBPQ6XZF7 1577 aa27.9■■■□□ 2.06
DDX17-209ENST00000479734 IFT140Q96RY7 1462 aa27.84■■■□□ 2.05
DDX17-209ENST00000479734 ZNF608Q9ULD9 1512 aaPredicted RBP27.76■■■□□ 2.03
DDX17-209ENST00000479734 POLA1P09884 1462 aaPredicted RBP27.72■■■□□ 2.03
DDX17-209ENST00000479734 CUX1P39880 1505 aa27.71■■■□□ 2.03
DDX17-209ENST00000479734 SOGA1O94964 1423 aa27.68■■■□□ 2.02
DDX17-209ENST00000479734 RAD54L2Q9Y4B4 1467 aa27.68■■■□□ 2.02
DDX17-209ENST00000479734 FGD5Q6ZNL6 1462 aa27.66■■■□□ 2.02
DDX17-209ENST00000479734 AQRO60306 1485 aaKnown RBP eCLIP27.63■■■□□ 2.013e-6■■□□□ 13.8
DDX17-209ENST00000479734 TARBP1Q13395 1621 aaKnown RBP27.62■■■□□ 2.01
DDX17-209ENST00000479734 TDRD9Q8NDG6 1382 aaKnown RBP27.6■■■□□ 2.01
DDX17-209ENST00000479734 OSCARQ8IYS5 282 aa27.58■■■□□ 2.01
DDX17-209ENST00000479734 EIF4G3O43432 1585 aaKnown RBP27.57■■■□□ 2
DDX17-209ENST00000479734 WRNQ14191 1432 aaPredicted RBP eCLIP27.52■■■□□ 2
DDX17-209ENST00000479734 FBLN2P98095 1184 aa27.5■■□□□ 1.99
DDX17-209ENST00000479734 SYNJ1O43426 1573 aa27.4■■□□□ 1.98
DDX17-209ENST00000479734 TOP2BQ02880 1626 aa27.38■■□□□ 1.97
DDX17-209ENST00000479734 BIVM-ERCC5R4GMW8 1640 aa27.34■■□□□ 1.97
DDX17-209ENST00000479734 GRIN2BQ13224 1484 aa27.33■■□□□ 1.97
DDX17-209ENST00000479734 GAPVD1Q14C86 1478 aa27.33■■□□□ 1.97
DDX17-209ENST00000479734 ABCA10Q8WWZ4 1543 aa27.33■■□□□ 1.97
DDX17-209ENST00000479734 SNAPC4Q5SXM2 1469 aa27.32■■□□□ 1.96
DDX17-209ENST00000479734 WDR97A6NE52 1622 aa27.32■■□□□ 1.96
DDX17-209ENST00000479734 CHMP7Q8WUX9 453 aaPredicted RBP27.32■■□□□ 1.96
DDX17-209ENST00000479734 CHD1O14646 1710 aa27.24■■□□□ 1.95
DDX17-209ENST00000479734 TRIM41Q8WV44 630 aa27.23■■□□□ 1.95
DDX17-209ENST00000479734 MAGI1Q96QZ7 1491 aaPredicted RBP27.23■■□□□ 1.95
DDX17-209ENST00000479734 ABCA5Q8WWZ7 1642 aa27.19■■□□□ 1.94
DDX17-209ENST00000479734 PBRM1Q86U86 1689 aa27.17■■□□□ 1.94
DDX17-209ENST00000479734 SYNJ2O15056 1496 aa27.15■■□□□ 1.94
DDX17-209ENST00000479734 ARHGEF11O15085 1522 aa27.01■■□□□ 1.91
DDX17-209ENST00000479734 RIMBP3CA6NJZ7 1639 aa27.01■■□□□ 1.91
DDX17-209ENST00000479734 RIMBP3BA6NNM3 1639 aa27.01■■□□□ 1.91
DDX17-209ENST00000479734 RIMBP3Q9UFD9 1639 aa27.01■■□□□ 1.91
DDX17-209ENST00000479734 ERICH3Q5RHP9 1530 aa27■■□□□ 1.91
DDX17-209ENST00000479734 FHAD1B1AJZ9 1412 aa26.99■■□□□ 1.91
DDX17-209ENST00000479734 KIF27Q86VH2 1401 aa26.98■■□□□ 1.91
DDX17-209ENST00000479734 ADAMTS12P58397 1594 aa26.97■■□□□ 1.91
DDX17-209ENST00000479734 GRIN2AQ12879 1464 aa26.96■■□□□ 1.91
DDX17-209ENST00000479734 CYB5RLQ6IPT4 315 aa26.95■■□□□ 1.9
DDX17-209ENST00000479734 CLASP1Q7Z460 1538 aa26.92■■□□□ 1.9
DDX17-209ENST00000479734 IGF1RP08069 1367 aa26.88■■□□□ 1.89
DDX17-209ENST00000479734 NUP160Q12769 1436 aa26.81■■□□□ 1.88
DDX17-209ENST00000479734 CEP170Q5SW79 1584 aa26.8■■□□□ 1.88
DDX17-209ENST00000479734 ARAP1Q96P48 1450 aa26.78■■□□□ 1.88
DDX17-209ENST00000479734 CARMIL1Q5VZK9 1371 aa26.74■■□□□ 1.87
DDX17-209ENST00000479734 CUL7Q14999 1698 aa26.7■■□□□ 1.87
DDX17-209ENST00000479734 RUSC2Q8N2Y8 1516 aa26.7■■□□□ 1.86
DDX17-209ENST00000479734 JPH4Q96JJ6 628 aa26.68■■□□□ 1.86
DDX17-209ENST00000479734 PRG4Q92954 1404 aaPredicted RBP26.62■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms