RNA–Protein interactions for RNA: ENST00000640332.1

DDX17-211, Transcript of DEAD-box helicase 17, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene DDX17, Length 2,190 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX17-211ENST00000640332 NISCHQ9Y2I1 1504 aa38.21■■■■□ 3.71
DDX17-211ENST00000640332 CCDC180Q9P1Z9 1646 aa32.7■■■□□ 2.82
DDX17-211ENST00000640332 ZCCHC6Q5VYS8 1495 aaKnown RBP32.29■■■□□ 2.76
DDX17-211ENST00000640332 SHROOM4Q9ULL8 1493 aa32.13■■■□□ 2.73
DDX17-211ENST00000640332 DCAF1Q9Y4B6 1507 aa31.48■■■□□ 2.63
DDX17-211ENST00000640332 DCAF8L2P0C7V8 631 aa31.44■■■□□ 2.62
DDX17-211ENST00000640332 SUPT5HO00267 1087 aaKnown RBP31.41■■■□□ 2.62
DDX17-211ENST00000640332 MYO15BQ96JP2 1530 aa30.69■■■□□ 2.5
DDX17-211ENST00000640332 CHIC1Q5VXU3 224 aa30.55■■■□□ 2.48
DDX17-211ENST00000640332 SCRIBQ14160 1630 aa30.41■■■□□ 2.46
DDX17-211ENST00000640332 ABCC9O60706 1549 aa30.41■■■□□ 2.46
DDX17-211ENST00000640332 NACADO15069 1562 aa30.26■■■□□ 2.43
DDX17-211ENST00000640332 RSF1Q96T23 1441 aaPredicted RBP30.11■■■□□ 2.41
DDX17-211ENST00000640332 RB1CC1Q8TDY2 1594 aa29.78■■■□□ 2.36
DDX17-211ENST00000640332 CECR2Q9BXF3 1484 aa29.73■■■□□ 2.35
DDX17-211ENST00000640332 MROH2BQ7Z745 1585 aa29.64■■■□□ 2.33
DDX17-211ENST00000640332 LOC105371045A0A1W2PR82 267 aa29.53■■■□□ 2.32
DDX17-211ENST00000640332 WIZO95785 1651 aa29.45■■■□□ 2.31
DDX17-211ENST00000640332 BAZ1AQ9NRL2 1556 aaPredicted RBP29.37■■■□□ 2.29
DDX17-211ENST00000640332 TRIM41Q8WV44 630 aa29.36■■■□□ 2.29
DDX17-211ENST00000640332 UNC13AQ9UPW8 1703 aa29.3■■■□□ 2.28
DDX17-211ENST00000640332 PCGF6Q9BYE7 350 aa29.24■■■□□ 2.27
DDX17-211ENST00000640332 HRCP23327 699 aa29.18■■■□□ 2.26
DDX17-211ENST00000640332 SMARCA4P51532 1647 aa29.15■■■□□ 2.26
DDX17-211ENST00000640332 TOP2AP11388 1531 aaKnown RBP29.07■■■□□ 2.24
DDX17-211ENST00000640332 EIF4G1Q04637 1599 aaKnown RBP29.05■■■□□ 2.24
DDX17-211ENST00000640332 FAM9AQ8IZU1 332 aaPredicted RBP28.98■■■□□ 2.23
DDX17-211ENST00000640332 BICRAQ9NZM4 1560 aa28.96■■■□□ 2.23
DDX17-211ENST00000640332 CCDC88BA6NC98 1476 aa28.89■■■□□ 2.22
DDX17-211ENST00000640332 SMARCA2P51531 1590 aa28.88■■■□□ 2.21
DDX17-211ENST00000640332 TRIM26Q12899 539 aaPredicted RBP28.87■■■□□ 2.21
DDX17-211ENST00000640332 PABPN1Q86U42 306 aaKnown RBP eCLIP28.82■■■□□ 2.2
DDX17-211ENST00000640332 PEG3Q9GZU2 1588 aa28.69■■■□□ 2.18
DDX17-211ENST00000640332 ABCC8Q09428 1581 aa28.66■■■□□ 2.18
DDX17-211ENST00000640332 EHMT2Q96KQ7 1210 aa28.62■■■□□ 2.17
DDX17-211ENST00000640332 PPARGC1BQ86YN6 1023 aaKnown RBP28.47■■■□□ 2.15
DDX17-211ENST00000640332 ATAD2BQ9ULI0 1458 aa28.44■■■□□ 2.14
DDX17-211ENST00000640332 SOGA1O94964 1423 aa28.35■■■□□ 2.13
DDX17-211ENST00000640332 BAZ1BQ9UIG0 1483 aaKnown RBP28.33■■■□□ 2.13
DDX17-211ENST00000640332 EEA1Q15075 1411 aa28.31■■■□□ 2.12
DDX17-211ENST00000640332 WRNQ14191 1432 aaPredicted RBP eCLIP28.27■■■□□ 2.12
DDX17-211ENST00000640332 RUSC2Q8N2Y8 1516 aa28.21■■■□□ 2.11
DDX17-211ENST00000640332 CSRNP3Q8WYN3 585 aa28.2■■■□□ 2.1
DDX17-211ENST00000640332 TNIKQ9UKE5 1360 aa28.17■■■□□ 2.1
DDX17-211ENST00000640332 ZEB1P37275 1124 aaPredicted RBP28.17■■■□□ 2.1
DDX17-211ENST00000640332 SYNJ1O43426 1573 aa28.14■■■□□ 2.1
DDX17-211ENST00000640332 CEP162Q5TB80 1403 aa28.14■■■□□ 2.1
DDX17-211ENST00000640332 GOLGA3Q08378 1498 aa28.04■■■□□ 2.08
DDX17-211ENST00000640332 NCAPD3P42695 1498 aa27.98■■■□□ 2.07
DDX17-211ENST00000640332 HMGXB3Q12766 1538 aa27.98■■■□□ 2.07
DDX17-211ENST00000640332 UBTFP17480 764 aaKnown RBP27.97■■■□□ 2.07
DDX17-211ENST00000640332 KIF21BO75037 1637 aa27.92■■■□□ 2.06
DDX17-211ENST00000640332 CEP164Q9UPV0 1460 aa27.92■■■□□ 2.06
DDX17-211ENST00000640332 TOP2BQ02880 1626 aa27.88■■■□□ 2.05
DDX17-211ENST00000640332 BIVM-ERCC5R4GMW8 1640 aa27.81■■■□□ 2.04
DDX17-211ENST00000640332 RAPGEF2Q9Y4G8 1499 aa27.7■■■□□ 2.02
DDX17-211ENST00000640332 CLIP1P30622 1438 aa27.67■■■□□ 2.02
DDX17-211ENST00000640332 CFTRP13569 1480 aa27.67■■■□□ 2.02
DDX17-211ENST00000640332 TTBK1Q5TCY1 1321 aaPredicted RBP27.66■■■□□ 2.02
DDX17-211ENST00000640332 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.65■■■□□ 2.02
DDX17-211ENST00000640332 CUX1P39880 1505 aa27.63■■■□□ 2.01
DDX17-211ENST00000640332 CCER1Q8TC90 406 aaPredicted RBP27.59■■■□□ 2.01
DDX17-211ENST00000640332 VPS8Q8N3P4 1428 aa27.55■■■□□ 2
DDX17-211ENST00000640332 PRXQ9BXM0 1461 aa27.54■■■□□ 2
DDX17-211ENST00000640332 ERICH3Q5RHP9 1530 aa27.53■■■□□ 2
DDX17-211ENST00000640332 PRDM2Q13029 1718 aa27.49■■□□□ 1.99
DDX17-211ENST00000640332 KIF27Q86VH2 1401 aa27.44■■□□□ 1.98
DDX17-211ENST00000640332 CADPSQ9ULU8 1353 aa27.37■■□□□ 1.97
DDX17-211ENST00000640332 RANGAP1P46060 587 aaPredicted RBP27.33■■□□□ 1.97
DDX17-211ENST00000640332 CC2D2AQ9P2K1 1620 aa27.33■■□□□ 1.96
DDX17-211ENST00000640332 APLP2Q06481 763 aa27.32■■□□□ 1.96
DDX17-211ENST00000640332 ARAP1Q96P48 1450 aa27.28■■□□□ 1.96
DDX17-211ENST00000640332 CUX2O14529 1486 aa27.19■■□□□ 1.94
DDX17-211ENST00000640332 HNRNPUL2Q1KMD3 747 aaKnown RBP27.16■■□□□ 1.94
DDX17-211ENST00000640332 IGF1RP08069 1367 aa27.16■■□□□ 1.94
DDX17-211ENST00000640332 FGD5Q6ZNL6 1462 aa27.15■■□□□ 1.94
DDX17-211ENST00000640332 FANCD2Q9BXW9 1451 aa27.09■■□□□ 1.93
DDX17-211ENST00000640332 ARHGAP35Q9NRY4 1499 aa27.09■■□□□ 1.93
DDX17-211ENST00000640332 CARMIL1Q5VZK9 1371 aa27.02■■□□□ 1.92
DDX17-211ENST00000640332 KANK4Q5T7N3 995 aaPredicted RBP27.02■■□□□ 1.92
DDX17-211ENST00000640332 DNMBPQ6XZF7 1577 aa26.97■■□□□ 1.91
DDX17-211ENST00000640332 DIEXFQ68CQ4 756 aaKnown RBP26.93■■□□□ 1.9
DDX17-211ENST00000640332 NESP48681 1621 aa26.91■■□□□ 1.9
DDX17-211ENST00000640332 TOPBP1Q92547 1522 aa26.91■■□□□ 1.9
DDX17-211ENST00000640332 RRBP1Q9P2E9 1410 aaKnown RBP26.91■■□□□ 1.9
DDX17-211ENST00000640332 ABCA10Q8WWZ4 1543 aa26.89■■□□□ 1.89
DDX17-211ENST00000640332 POLA1P09884 1462 aaPredicted RBP26.87■■□□□ 1.89
DDX17-211ENST00000640332 RAD54L2Q9Y4B4 1467 aa26.86■■□□□ 1.89
DDX17-211ENST00000640332 ZNF316A6NFI3 1004 aaPredicted RBP26.85■■□□□ 1.89
DDX17-211ENST00000640332 MAP3K1Q13233 1512 aa26.82■■□□□ 1.88
DDX17-211ENST00000640332 LAMC3Q9Y6N6 1575 aa26.82■■□□□ 1.88
DDX17-211ENST00000640332 TIAM1Q13009 1591 aa26.77■■□□□ 1.88
DDX17-211ENST00000640332 CLSPNQ9HAW4 1339 aa26.76■■□□□ 1.87
DDX17-211ENST00000640332 CCNB3Q8WWL7 1395 aa26.76■■□□□ 1.87
DDX17-211ENST00000640332 DHX57Q6P158 1386 aaKnown RBP26.73■■□□□ 1.87
DDX17-211ENST00000640332 CUL7Q14999 1698 aa26.72■■□□□ 1.87
DDX17-211ENST00000640332 URB2Q14146 1524 aaKnown RBP26.72■■□□□ 1.87
DDX17-211ENST00000640332 FHAD1B1AJZ9 1412 aa26.71■■□□□ 1.87
DDX17-211ENST00000640332 WDR97A6NE52 1622 aa26.68■■□□□ 1.86
DDX17-211ENST00000640332 LRRC9Q6ZRR7 1453 aa26.66■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms