RNA–Protein interactions for RNA: ENST00000588991.6

GPI-208, Transcript of glucose-6-phosphate isomerase, humanhuman

TSL 2

Gene GPI, Length 2,021 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPI-208ENST00000588991 NISCHQ9Y2I1 1504 aa45.26■■■■■ 4.84
GPI-208ENST00000588991 CCDC180Q9P1Z9 1646 aa39.21■■■■□ 3.87
GPI-208ENST00000588991 ZCCHC6Q5VYS8 1495 aaKnown RBP38.15■■■■□ 3.7
GPI-208ENST00000588991 SHROOM4Q9ULL8 1493 aa37.48■■■■□ 3.59
GPI-208ENST00000588991 DCAF1Q9Y4B6 1507 aa37.35■■■■□ 3.57
GPI-208ENST00000588991 DCAF8L2P0C7V8 631 aa37.24■■■■□ 3.55
GPI-208ENST00000588991 MYO15BQ96JP2 1530 aa36.64■■■■□ 3.46
GPI-208ENST00000588991 ABCC9O60706 1549 aa36.59■■■■□ 3.45
GPI-208ENST00000588991 NACADO15069 1562 aa36.32■■■■□ 3.4
GPI-208ENST00000588991 SUPT5HO00267 1087 aaKnown RBP36.3■■■■□ 3.4
GPI-208ENST00000588991 SCRIBQ14160 1630 aa36.25■■■■□ 3.39
GPI-208ENST00000588991 RB1CC1Q8TDY2 1594 aa35.9■■■■□ 3.34
GPI-208ENST00000588991 UNC13AQ9UPW8 1703 aa35.38■■■■□ 3.25
GPI-208ENST00000588991 RSF1Q96T23 1441 aaPredicted RBP35.34■■■■□ 3.25
GPI-208ENST00000588991 CECR2Q9BXF3 1484 aa35.18■■■■□ 3.22
GPI-208ENST00000588991 MROH2BQ7Z745 1585 aa35.04■■■■□ 3.2
GPI-208ENST00000588991 CHIC1Q5VXU3 224 aa35.01■■■■□ 3.19
GPI-208ENST00000588991 BAZ1AQ9NRL2 1556 aaPredicted RBP34.9■■■■□ 3.18
GPI-208ENST00000588991 BICRAQ9NZM4 1560 aa34.86■■■■□ 3.17
GPI-208ENST00000588991 WIZO95785 1651 aa34.86■■■■□ 3.17
GPI-208ENST00000588991 SMARCA4P51532 1647 aa34.72■■■■□ 3.15
GPI-208ENST00000588991 PABPN1Q86U42 306 aaKnown RBP eCLIP34.61■■■■□ 3.134e-8■■□□□ 11.5
GPI-208ENST00000588991 TOP2AP11388 1531 aaKnown RBP34.42■■■■□ 3.1
GPI-208ENST00000588991 PEG3Q9GZU2 1588 aa34.2■■■■□ 3.07
GPI-208ENST00000588991 SMARCA2P51531 1590 aa34.15■■■■□ 3.06
GPI-208ENST00000588991 EIF4G1Q04637 1599 aaKnown RBP34.14■■■■□ 3.06
GPI-208ENST00000588991 CCDC88BA6NC98 1476 aa34.08■■■■□ 3.05
GPI-208ENST00000588991 TRIM41Q8WV44 630 aa34.02■■■■□ 3.04
GPI-208ENST00000588991 ATAD2BQ9ULI0 1458 aa33.94■■■■□ 3.02
GPI-208ENST00000588991 BAZ1BQ9UIG0 1483 aaKnown RBP33.81■■■■□ 3
GPI-208ENST00000588991 LOC105371045A0A1W2PR82 267 aa33.75■■■□□ 2.99
GPI-208ENST00000588991 ABCC8Q09428 1581 aa33.65■■■□□ 2.98
GPI-208ENST00000588991 HMGXB3Q12766 1538 aa33.55■■■□□ 2.96
GPI-208ENST00000588991 FAM9AQ8IZU1 332 aaPredicted RBP33.51■■■□□ 2.95
GPI-208ENST00000588991 NCAPD3P42695 1498 aa33.49■■■□□ 2.95
GPI-208ENST00000588991 WRNQ14191 1432 aaPredicted RBP eCLIP33.25■■■□□ 2.91
GPI-208ENST00000588991 SYNJ1O43426 1573 aa33.18■■■□□ 2.9
GPI-208ENST00000588991 CC2D2AQ9P2K1 1620 aa33.13■■■□□ 2.89
GPI-208ENST00000588991 EHMT2Q96KQ7 1210 aa33.09■■■□□ 2.89
GPI-208ENST00000588991 SOGA1O94964 1423 aa33.08■■■□□ 2.89
GPI-208ENST00000588991 EEA1Q15075 1411 aa33.03■■■□□ 2.88
GPI-208ENST00000588991 PRDM2Q13029 1718 aa32.97■■■□□ 2.87
GPI-208ENST00000588991 RUSC2Q8N2Y8 1516 aa32.95■■■□□ 2.87
GPI-208ENST00000588991 CFTRP13569 1480 aa32.95■■■□□ 2.87
GPI-208ENST00000588991 TOP2BQ02880 1626 aa32.95■■■□□ 2.86
GPI-208ENST00000588991 BIVM-ERCC5R4GMW8 1640 aa32.93■■■□□ 2.86
GPI-208ENST00000588991 PCGF6Q9BYE7 350 aa32.85■■■□□ 2.85
GPI-208ENST00000588991 CSRNP3Q8WYN3 585 aa32.81■■■□□ 2.84
GPI-208ENST00000588991 CUX1P39880 1505 aa32.73■■■□□ 2.83
GPI-208ENST00000588991 CADPSQ9ULU8 1353 aa32.69■■■□□ 2.82
GPI-208ENST00000588991 GOLGA3Q08378 1498 aa32.68■■■□□ 2.82
GPI-208ENST00000588991 KIF21BO75037 1637 aa32.67■■■□□ 2.82
GPI-208ENST00000588991 TNIKQ9UKE5 1360 aa32.64■■■□□ 2.82
GPI-208ENST00000588991 TRIM26Q12899 539 aaPredicted RBP32.62■■■□□ 2.81
GPI-208ENST00000588991 CEP164Q9UPV0 1460 aa32.6■■■□□ 2.81
GPI-208ENST00000588991 CEP162Q5TB80 1403 aa32.58■■■□□ 2.81
GPI-208ENST00000588991 UBTFP17480 764 aaKnown RBP32.5■■■□□ 2.79
GPI-208ENST00000588991 FANCD2Q9BXW9 1451 aa32.39■■■□□ 2.78
GPI-208ENST00000588991 RAPGEF2Q9Y4G8 1499 aa32.38■■■□□ 2.77
GPI-208ENST00000588991 HRCP23327 699 aa32.36■■■□□ 2.77
GPI-208ENST00000588991 NESP48681 1621 aa32.33■■■□□ 2.77
GPI-208ENST00000588991 KIF27Q86VH2 1401 aa32.33■■■□□ 2.77
GPI-208ENST00000588991 LAMC3Q9Y6N6 1575 aa32.31■■■□□ 2.76
GPI-208ENST00000588991 ERICH3Q5RHP9 1530 aa32.31■■■□□ 2.76
GPI-208ENST00000588991 PRXQ9BXM0 1461 aa32.27■■■□□ 2.76
GPI-208ENST00000588991 FGD5Q6ZNL6 1462 aa32.27■■■□□ 2.76
GPI-208ENST00000588991 DNMBPQ6XZF7 1577 aa32.23■■■□□ 2.75
GPI-208ENST00000588991 PPARGC1BQ86YN6 1023 aaKnown RBP32.19■■■□□ 2.74
GPI-208ENST00000588991 CLIP1P30622 1438 aa32.18■■■□□ 2.74
GPI-208ENST00000588991 CUX2O14529 1486 aa32.17■■■□□ 2.74
GPI-208ENST00000588991 TOPBP1Q92547 1522 aa32.12■■■□□ 2.73
GPI-208ENST00000588991 DNAJC5BQ9UF47 199 aa32.1■■■□□ 2.73
GPI-208ENST00000588991 POLA1P09884 1462 aaPredicted RBP32.01■■■□□ 2.72
GPI-208ENST00000588991 KIF21AQ7Z4S6 1674 aa32.01■■■□□ 2.71
GPI-208ENST00000588991 PDS5BQ9NTI5 1447 aa31.99■■■□□ 2.71
GPI-208ENST00000588991 URB2Q14146 1524 aaKnown RBP31.98■■■□□ 2.71
GPI-208ENST00000588991 IGF1RP08069 1367 aa31.97■■■□□ 2.71
GPI-208ENST00000588991 VPS8Q8N3P4 1428 aa31.97■■■□□ 2.71
GPI-208ENST00000588991 ABCA10Q8WWZ4 1543 aa31.95■■■□□ 2.7
GPI-208ENST00000588991 RAD54L2Q9Y4B4 1467 aa31.94■■■□□ 2.7
GPI-208ENST00000588991 WDR97A6NE52 1622 aa31.9■■■□□ 2.7
GPI-208ENST00000588991 RANGAP1P46060 587 aaPredicted RBP31.89■■■□□ 2.7
GPI-208ENST00000588991 TTBK1Q5TCY1 1321 aaPredicted RBP31.84■■■□□ 2.69
GPI-208ENST00000588991 CARMIL1Q5VZK9 1371 aa31.84■■■□□ 2.69
GPI-208ENST00000588991 ARAP1Q96P48 1450 aa31.82■■■□□ 2.68
GPI-208ENST00000588991 CUL7Q14999 1698 aa31.75■■■□□ 2.67
GPI-208ENST00000588991 ABCA5Q8WWZ7 1642 aa31.71■■■□□ 2.67
GPI-208ENST00000588991 ARHGAP35Q9NRY4 1499 aa31.69■■■□□ 2.66
GPI-208ENST00000588991 APLP2Q06481 763 aa31.64■■■□□ 2.66
GPI-208ENST00000588991 TARBP1Q13395 1621 aaKnown RBP31.62■■■□□ 2.65
GPI-208ENST00000588991 MRC2Q9UBG0 1479 aa31.6■■■□□ 2.65
GPI-208ENST00000588991 ZEB1P37275 1124 aaPredicted RBP31.58■■■□□ 2.65
GPI-208ENST00000588991 CTTNBP2Q8WZ74 1663 aa31.57■■■□□ 2.64
GPI-208ENST00000588991 GAPVD1Q14C86 1478 aa31.56■■■□□ 2.64
GPI-208ENST00000588991 TDRD9Q8NDG6 1382 aaKnown RBP31.54■■■□□ 2.64
GPI-208ENST00000588991 PBRM1Q86U86 1689 aa31.46■■■□□ 2.63
GPI-208ENST00000588991 WDR62O43379 1518 aa31.43■■■□□ 2.62
GPI-208ENST00000588991 EFCAB5A4FU69 1503 aa31.37■■■□□ 2.61
GPI-208ENST00000588991 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP31.35■■■□□ 2.61
GPI-208ENST00000588991 KANK4Q5T7N3 995 aaPredicted RBP31.3■■■□□ 2.6
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms