RNA–Protein interactions for RNA: ENST00000468080.1

GPM6B-206, Transcript of glycoprotein M6B, humanhuman

TSL 4

Gene GPM6B, Length 587 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPM6B-206ENST00000468080 NISCHQ9Y2I1 1504 aa31.91■■■□□ 2.7
GPM6B-206ENST00000468080 ABCC9O60706 1549 aa29.6■■■□□ 2.33
GPM6B-206ENST00000468080 CCDC180Q9P1Z9 1646 aa28.83■■■□□ 2.21
GPM6B-206ENST00000468080 DNAJC5BQ9UF47 199 aa28.45■■■□□ 2.14
GPM6B-206ENST00000468080 RB1CC1Q8TDY2 1594 aa27.79■■■□□ 2.04
GPM6B-206ENST00000468080 PABPN1Q86U42 306 aaKnown RBP eCLIP27.52■■■□□ 2
GPM6B-206ENST00000468080 NACADO15069 1562 aa27.44■■□□□ 1.98
GPM6B-206ENST00000468080 DCAF8L2P0C7V8 631 aa27.33■■□□□ 1.97
GPM6B-206ENST00000468080 UNC13AQ9UPW8 1703 aa27.19■■□□□ 1.94
GPM6B-206ENST00000468080 BICRAQ9NZM4 1560 aa27.08■■□□□ 1.93
GPM6B-206ENST00000468080 MYO15BQ96JP2 1530 aa26.82■■□□□ 1.88
GPM6B-206ENST00000468080 CECR2Q9BXF3 1484 aa26.7■■□□□ 1.87
GPM6B-206ENST00000468080 CC2D2AQ9P2K1 1620 aa26.66■■□□□ 1.86
GPM6B-206ENST00000468080 DNAJC5Q9H3Z4 198 aa26.54■■□□□ 1.84
GPM6B-206ENST00000468080 SHROOM4Q9ULL8 1493 aa26.51■■□□□ 1.83
GPM6B-206ENST00000468080 EIF4G1Q04637 1599 aaKnown RBP26.43■■□□□ 1.82
GPM6B-206ENST00000468080 SCRIBQ14160 1630 aa26.31■■□□□ 1.8
GPM6B-206ENST00000468080 ZCCHC6Q5VYS8 1495 aaKnown RBP26.28■■□□□ 1.8
GPM6B-206ENST00000468080 DCAF1Q9Y4B6 1507 aa26.26■■□□□ 1.79
GPM6B-206ENST00000468080 CUX2O14529 1486 aa25.69■■□□□ 1.7
GPM6B-206ENST00000468080 ERCC6Q03468 1493 aa25.55■■□□□ 1.68
GPM6B-206ENST00000468080 NCAPD3P42695 1498 aa25.4■■□□□ 1.66
GPM6B-206ENST00000468080 NESP48681 1621 aa25.26■■□□□ 1.63
GPM6B-206ENST00000468080 ATAD2BQ9ULI0 1458 aa25.22■■□□□ 1.63
GPM6B-206ENST00000468080 TRIM41Q8WV44 630 aa25.11■■□□□ 1.61
GPM6B-206ENST00000468080 HMGXB3Q12766 1538 aa25.08■■□□□ 1.61
GPM6B-206ENST00000468080 SMARCA2P51531 1590 aa25.06■■□□□ 1.6
GPM6B-206ENST00000468080 THOC2Q8NI27 1593 aaKnown RBP25.05■■□□□ 1.6
GPM6B-206ENST00000468080 SMARCA4P51532 1647 aa25.01■■□□□ 1.59
GPM6B-206ENST00000468080 BAZ1BQ9UIG0 1483 aaKnown RBP24.92■■□□□ 1.58
GPM6B-206ENST00000468080 LAMC3Q9Y6N6 1575 aa24.87■■□□□ 1.57
GPM6B-206ENST00000468080 KIF21AQ7Z4S6 1674 aa24.85■■□□□ 1.57
GPM6B-206ENST00000468080 PDS5BQ9NTI5 1447 aa24.78■■□□□ 1.56
GPM6B-206ENST00000468080 BAZ1AQ9NRL2 1556 aaPredicted RBP24.77■■□□□ 1.56
GPM6B-206ENST00000468080 PEG3Q9GZU2 1588 aa24.75■■□□□ 1.55
GPM6B-206ENST00000468080 MROH2BQ7Z745 1585 aa24.62■■□□□ 1.53
GPM6B-206ENST00000468080 MRC2Q9UBG0 1479 aa24.61■■□□□ 1.53
GPM6B-206ENST00000468080 CADPSQ9ULU8 1353 aa24.6■■□□□ 1.53
GPM6B-206ENST00000468080 WDR62O43379 1518 aa24.56■■□□□ 1.52
GPM6B-206ENST00000468080 OSCARQ8IYS5 282 aa24.5■■□□□ 1.51
GPM6B-206ENST00000468080 CEP164Q9UPV0 1460 aa24.37■■□□□ 1.49
GPM6B-206ENST00000468080 FANCD2Q9BXW9 1451 aa24.32■■□□□ 1.48
GPM6B-206ENST00000468080 WIZO95785 1651 aa24.28■■□□□ 1.48
GPM6B-206ENST00000468080 RIMBP3CA6NJZ7 1639 aa24.21■■□□□ 1.47
GPM6B-206ENST00000468080 RIMBP3BA6NNM3 1639 aa24.21■■□□□ 1.47
GPM6B-206ENST00000468080 RIMBP3Q9UFD9 1639 aa24.21■■□□□ 1.47
GPM6B-206ENST00000468080 URB2Q14146 1524 aaKnown RBP24.18■■□□□ 1.46
GPM6B-206ENST00000468080 CFTRP13569 1480 aa24.17■■□□□ 1.46
GPM6B-206ENST00000468080 ARHGEF11O15085 1522 aa24.06■■□□□ 1.44
GPM6B-206ENST00000468080 ZNF608Q9ULD9 1512 aaPredicted RBP24.01■■□□□ 1.43
GPM6B-206ENST00000468080 CYB5RLQ6IPT4 315 aa24.01■■□□□ 1.43
GPM6B-206ENST00000468080 TRHP20396 242 aaPredicted RBP23.93■■□□□ 1.42
GPM6B-206ENST00000468080 IFT140Q96RY7 1462 aa23.92■■□□□ 1.42
GPM6B-206ENST00000468080 TOP2AP11388 1531 aaKnown RBP23.88■■□□□ 1.41
GPM6B-206ENST00000468080 RSF1Q96T23 1441 aaPredicted RBP23.87■■□□□ 1.41
GPM6B-206ENST00000468080 ARAP1Q96P48 1450 aa23.8■■□□□ 1.4
GPM6B-206ENST00000468080 TOPBP1Q92547 1522 aa23.79■■□□□ 1.4
GPM6B-206ENST00000468080 PRDM2Q13029 1718 aa23.79■■□□□ 1.4
GPM6B-206ENST00000468080 EIF4G3O43432 1585 aaKnown RBP23.77■■□□□ 1.4
GPM6B-206ENST00000468080 CHD1O14646 1710 aa23.73■■□□□ 1.39
GPM6B-206ENST00000468080 AQRO60306 1485 aaKnown RBP eCLIP23.72■■□□□ 1.39
GPM6B-206ENST00000468080 FBLN2P98095 1184 aa23.71■■□□□ 1.39
GPM6B-206ENST00000468080 AEBP2Q6ZN18 517 aaPredicted RBP23.69■■□□□ 1.38
GPM6B-206ENST00000468080 CCDC88BA6NC98 1476 aa23.68■■□□□ 1.38
GPM6B-206ENST00000468080 ABCC8Q09428 1581 aa23.64■■□□□ 1.37
GPM6B-206ENST00000468080 TARBP1Q13395 1621 aaKnown RBP23.61■■□□□ 1.37
GPM6B-206ENST00000468080 DNMBPQ6XZF7 1577 aa23.6■■□□□ 1.37
GPM6B-206ENST00000468080 POLA1P09884 1462 aaPredicted RBP23.49■■□□□ 1.35
GPM6B-206ENST00000468080 TDRD9Q8NDG6 1382 aaKnown RBP23.49■■□□□ 1.35
GPM6B-206ENST00000468080 RAD54L2Q9Y4B4 1467 aa23.48■■□□□ 1.35
GPM6B-206ENST00000468080 CLASP1Q7Z460 1538 aa23.43■■□□□ 1.34
GPM6B-206ENST00000468080 SOGA1O94964 1423 aa23.41■■□□□ 1.34
GPM6B-206ENST00000468080 CHMP7Q8WUX9 453 aaPredicted RBP23.4■■□□□ 1.34
GPM6B-206ENST00000468080 SNAPC4Q5SXM2 1469 aa23.4■■□□□ 1.34
GPM6B-206ENST00000468080 SYNJ1O43426 1573 aa23.34■■□□□ 1.33
GPM6B-206ENST00000468080 MAGI1Q96QZ7 1491 aaPredicted RBP23.27■■□□□ 1.32
GPM6B-206ENST00000468080 GAPVD1Q14C86 1478 aa23.26■■□□□ 1.31
GPM6B-206ENST00000468080 FGD5Q6ZNL6 1462 aa23.26■■□□□ 1.31
GPM6B-206ENST00000468080 SYNJ2O15056 1496 aa23.24■■□□□ 1.31
GPM6B-206ENST00000468080 GRIN2BQ13224 1484 aa23.24■■□□□ 1.31
GPM6B-206ENST00000468080 WDR97A6NE52 1622 aa23.22■■□□□ 1.31
GPM6B-206ENST00000468080 CUX1P39880 1505 aa23.15■■□□□ 1.3
GPM6B-206ENST00000468080 ERCC6L2Q5T890 1561 aa23.1■■□□□ 1.29
GPM6B-206ENST00000468080 PBRM1Q86U86 1689 aa23.07■■□□□ 1.28
GPM6B-206ENST00000468080 CEP170Q5SW79 1584 aa22.95■■□□□ 1.26
GPM6B-206ENST00000468080 ABCA5Q8WWZ7 1642 aa22.94■■□□□ 1.26
GPM6B-206ENST00000468080 ABCA10Q8WWZ4 1543 aa22.94■■□□□ 1.26
GPM6B-206ENST00000468080 GRIN2AQ12879 1464 aa22.93■■□□□ 1.26
GPM6B-206ENST00000468080 KIF13AQ9H1H9 1805 aa22.92■■□□□ 1.26
GPM6B-206ENST00000468080 NUP160Q12769 1436 aa22.89■■□□□ 1.25
GPM6B-206ENST00000468080 SHROOM2Q13796 1616 aa22.85■■□□□ 1.25
GPM6B-206ENST00000468080 ADAMTS12P58397 1594 aa22.81■■□□□ 1.24
GPM6B-206ENST00000468080 FAM69CQ0P6D2 419 aa22.79■■□□□ 1.24
GPM6B-206ENST00000468080 KDM4FA0A1W2PPD8 638 aa22.78■■□□□ 1.24
GPM6B-206ENST00000468080 ILDR1Q86SU0 546 aaPredicted RBP22.77■■□□□ 1.24
GPM6B-206ENST00000468080 PRG4Q92954 1404 aaPredicted RBP22.76■■□□□ 1.23
GPM6B-206ENST00000468080 FHAD1B1AJZ9 1412 aa22.75■■□□□ 1.23
GPM6B-206ENST00000468080 WRNQ14191 1432 aaPredicted RBP eCLIP22.73■■□□□ 1.23
GPM6B-206ENST00000468080 ABCC10Q5T3U5 1492 aa22.73■■□□□ 1.23
GPM6B-206ENST00000468080 JPH4Q96JJ6 628 aa22.72■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms