RNA–Protein interactions for RNA: ENST00000495487.1

PCMT1-210, Transcript of protein-L-isoaspartate (D-aspartate) O-methyltransferase, humanhuman

TSL 3

Gene PCMT1, Length 548 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCMT1-210ENST00000495487 NISCHQ9Y2I1 1504 aa37.9■■■■□ 3.66
PCMT1-210ENST00000495487 ABCC9O60706 1549 aa34.1■■■■□ 3.05
PCMT1-210ENST00000495487 CCDC180Q9P1Z9 1646 aa34.01■■■■□ 3.03
PCMT1-210ENST00000495487 RB1CC1Q8TDY2 1594 aa32.43■■■□□ 2.78
PCMT1-210ENST00000495487 DCAF8L2P0C7V8 631 aa32.18■■■□□ 2.74
PCMT1-210ENST00000495487 NACADO15069 1562 aa32.18■■■□□ 2.74
PCMT1-210ENST00000495487 DNAJC5BQ9UF47 199 aa32■■■□□ 2.71
PCMT1-210ENST00000495487 PABPN1Q86U42 306 aaKnown RBP eCLIP31.78■■■□□ 2.68
PCMT1-210ENST00000495487 MYO15BQ96JP2 1530 aa31.7■■■□□ 2.66
PCMT1-210ENST00000495487 UNC13AQ9UPW8 1703 aa31.64■■■□□ 2.66
PCMT1-210ENST00000495487 BICRAQ9NZM4 1560 aa31.42■■■□□ 2.62
PCMT1-210ENST00000495487 ZCCHC6Q5VYS8 1495 aaKnown RBP31.37■■■□□ 2.61
PCMT1-210ENST00000495487 DCAF1Q9Y4B6 1507 aa31.28■■■□□ 2.6
PCMT1-210ENST00000495487 SCRIBQ14160 1630 aa31.02■■■□□ 2.56
PCMT1-210ENST00000495487 SHROOM4Q9ULL8 1493 aa31.01■■■□□ 2.56
PCMT1-210ENST00000495487 CC2D2AQ9P2K1 1620 aa30.77■■■□□ 2.52
PCMT1-210ENST00000495487 CECR2Q9BXF3 1484 aa30.71■■■□□ 2.51
PCMT1-210ENST00000495487 EIF4G1Q04637 1599 aaKnown RBP30.69■■■□□ 2.5
PCMT1-210ENST00000495487 NCAPD3P42695 1498 aa29.71■■■□□ 2.35
PCMT1-210ENST00000495487 ATAD2BQ9ULI0 1458 aa29.61■■■□□ 2.33
PCMT1-210ENST00000495487 SMARCA4P51532 1647 aa29.56■■■□□ 2.32
PCMT1-210ENST00000495487 SMARCA2P51531 1590 aa29.54■■■□□ 2.32
PCMT1-210ENST00000495487 ERCC6Q03468 1493 aa29.48■■■□□ 2.31
PCMT1-210ENST00000495487 HMGXB3Q12766 1538 aa29.46■■■□□ 2.31
PCMT1-210ENST00000495487 DNAJC5Q9H3Z4 198 aa29.46■■■□□ 2.31
PCMT1-210ENST00000495487 BAZ1AQ9NRL2 1556 aaPredicted RBP29.43■■■□□ 2.3
PCMT1-210ENST00000495487 CUX2O14529 1486 aa29.38■■■□□ 2.29
PCMT1-210ENST00000495487 BAZ1BQ9UIG0 1483 aaKnown RBP29.36■■■□□ 2.29
PCMT1-210ENST00000495487 NESP48681 1621 aa29.26■■■□□ 2.27
PCMT1-210ENST00000495487 PEG3Q9GZU2 1588 aa29.25■■■□□ 2.27
PCMT1-210ENST00000495487 MROH2BQ7Z745 1585 aa29.2■■■□□ 2.26
PCMT1-210ENST00000495487 LAMC3Q9Y6N6 1575 aa29.05■■■□□ 2.24
PCMT1-210ENST00000495487 PDS5BQ9NTI5 1447 aa28.93■■■□□ 2.22
PCMT1-210ENST00000495487 THOC2Q8NI27 1593 aaKnown RBP28.92■■■□□ 2.22
PCMT1-210ENST00000495487 KIF21AQ7Z4S6 1674 aa28.86■■■□□ 2.21
PCMT1-210ENST00000495487 WIZO95785 1651 aa28.86■■■□□ 2.21
PCMT1-210ENST00000495487 CADPSQ9ULU8 1353 aa28.84■■■□□ 2.21
PCMT1-210ENST00000495487 MRC2Q9UBG0 1479 aa28.65■■■□□ 2.18
PCMT1-210ENST00000495487 RSF1Q96T23 1441 aaPredicted RBP28.6■■■□□ 2.17
PCMT1-210ENST00000495487 WDR62O43379 1518 aa28.54■■■□□ 2.16
PCMT1-210ENST00000495487 CEP164Q9UPV0 1460 aa28.53■■■□□ 2.16
PCMT1-210ENST00000495487 FANCD2Q9BXW9 1451 aa28.5■■■□□ 2.15
PCMT1-210ENST00000495487 TOP2AP11388 1531 aaKnown RBP28.48■■■□□ 2.15
PCMT1-210ENST00000495487 CFTRP13569 1480 aa28.46■■■□□ 2.15
PCMT1-210ENST00000495487 URB2Q14146 1524 aaKnown RBP28.23■■■□□ 2.11
PCMT1-210ENST00000495487 TRIM41Q8WV44 630 aa28.21■■■□□ 2.11
PCMT1-210ENST00000495487 CCDC88BA6NC98 1476 aa28.18■■■□□ 2.1
PCMT1-210ENST00000495487 PRDM2Q13029 1718 aa28.15■■■□□ 2.1
PCMT1-210ENST00000495487 OSCARQ8IYS5 282 aa28.13■■■□□ 2.09
PCMT1-210ENST00000495487 IFT140Q96RY7 1462 aa27.97■■■□□ 2.07
PCMT1-210ENST00000495487 TOPBP1Q92547 1522 aa27.94■■■□□ 2.06
PCMT1-210ENST00000495487 ABCC8Q09428 1581 aa27.92■■■□□ 2.06
PCMT1-210ENST00000495487 ZNF608Q9ULD9 1512 aaPredicted RBP27.91■■■□□ 2.06
PCMT1-210ENST00000495487 DNMBPQ6XZF7 1577 aa27.83■■■□□ 2.05
PCMT1-210ENST00000495487 EIF4G3O43432 1585 aaKnown RBP27.73■■■□□ 2.03
PCMT1-210ENST00000495487 AQRO60306 1485 aaKnown RBP eCLIP27.68■■■□□ 2.023e-6■■■■□ 24.7
PCMT1-210ENST00000495487 RIMBP3CA6NJZ7 1639 aa27.67■■■□□ 2.02
PCMT1-210ENST00000495487 RIMBP3BA6NNM3 1639 aa27.67■■■□□ 2.02
PCMT1-210ENST00000495487 RIMBP3Q9UFD9 1639 aa27.67■■■□□ 2.02
PCMT1-210ENST00000495487 TARBP1Q13395 1621 aaKnown RBP27.67■■■□□ 2.02
PCMT1-210ENST00000495487 POLA1P09884 1462 aaPredicted RBP27.64■■■□□ 2.02
PCMT1-210ENST00000495487 FBLN2P98095 1184 aa27.6■■■□□ 2.01
PCMT1-210ENST00000495487 ARHGEF11O15085 1522 aa27.58■■■□□ 2.01
PCMT1-210ENST00000495487 SOGA1O94964 1423 aa27.58■■■□□ 2
PCMT1-210ENST00000495487 RAD54L2Q9Y4B4 1467 aa27.57■■■□□ 2
PCMT1-210ENST00000495487 CHD1O14646 1710 aa27.55■■■□□ 2
PCMT1-210ENST00000495487 TDRD9Q8NDG6 1382 aaKnown RBP27.52■■■□□ 2
PCMT1-210ENST00000495487 FGD5Q6ZNL6 1462 aa27.48■■□□□ 1.99
PCMT1-210ENST00000495487 CYB5RLQ6IPT4 315 aa27.47■■□□□ 1.99
PCMT1-210ENST00000495487 CUX1P39880 1505 aa27.42■■□□□ 1.98
PCMT1-210ENST00000495487 SUPT5HO00267 1087 aaKnown RBP27.42■■□□□ 1.98
PCMT1-210ENST00000495487 WDR97A6NE52 1622 aa27.39■■□□□ 1.98
PCMT1-210ENST00000495487 CHMP7Q8WUX9 453 aaPredicted RBP27.38■■□□□ 1.97
PCMT1-210ENST00000495487 SNAPC4Q5SXM2 1469 aa27.38■■□□□ 1.97
PCMT1-210ENST00000495487 GRIN2BQ13224 1484 aa27.32■■□□□ 1.96
PCMT1-210ENST00000495487 MAGI1Q96QZ7 1491 aaPredicted RBP27.31■■□□□ 1.96
PCMT1-210ENST00000495487 ARAP1Q96P48 1450 aa27.3■■□□□ 1.96
PCMT1-210ENST00000495487 SYNJ1O43426 1573 aa27.24■■□□□ 1.95
PCMT1-210ENST00000495487 TRHP20396 242 aaPredicted RBP27.23■■□□□ 1.95
PCMT1-210ENST00000495487 SYNJ2O15056 1496 aa27.22■■□□□ 1.95
PCMT1-210ENST00000495487 GAPVD1Q14C86 1478 aa27.22■■□□□ 1.95
PCMT1-210ENST00000495487 CLASP1Q7Z460 1538 aa27.21■■□□□ 1.95
PCMT1-210ENST00000495487 PBRM1Q86U86 1689 aa27.17■■□□□ 1.94
PCMT1-210ENST00000495487 ABCA10Q8WWZ4 1543 aa27.16■■□□□ 1.94
PCMT1-210ENST00000495487 ABCA5Q8WWZ7 1642 aa27.08■■□□□ 1.93
PCMT1-210ENST00000495487 WRNQ14191 1432 aaPredicted RBP eCLIP27.08■■□□□ 1.93
PCMT1-210ENST00000495487 TOP2BQ02880 1626 aa26.99■■□□□ 1.91
PCMT1-210ENST00000495487 BIVM-ERCC5R4GMW8 1640 aa26.98■■□□□ 1.91
PCMT1-210ENST00000495487 GRIN2AQ12879 1464 aa26.94■■□□□ 1.9
PCMT1-210ENST00000495487 ADAMTS12P58397 1594 aa26.9■■□□□ 1.9
PCMT1-210ENST00000495487 FHAD1B1AJZ9 1412 aa26.88■■□□□ 1.89
PCMT1-210ENST00000495487 NUP160Q12769 1436 aa26.83■■□□□ 1.89
PCMT1-210ENST00000495487 CEP170Q5SW79 1584 aa26.83■■□□□ 1.89
PCMT1-210ENST00000495487 ERICH3Q5RHP9 1530 aa26.82■■□□□ 1.88
PCMT1-210ENST00000495487 ERCC6L2Q5T890 1561 aa26.79■■□□□ 1.88
PCMT1-210ENST00000495487 SHROOM2Q13796 1616 aa26.7■■□□□ 1.86
PCMT1-210ENST00000495487 JPH4Q96JJ6 628 aa26.65■■□□□ 1.86
PCMT1-210ENST00000495487 PRG4Q92954 1404 aaPredicted RBP26.64■■□□□ 1.85
PCMT1-210ENST00000495487 KIF27Q86VH2 1401 aa26.52■■□□□ 1.84
PCMT1-210ENST00000495487 RUSC2Q8N2Y8 1516 aa26.51■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms