RNA–Protein interactions for RNA: ENST00000486585.1

PCMT1-208, Transcript of protein-L-isoaspartate (D-aspartate) O-methyltransferase, humanhuman

TSL 3

Gene PCMT1, Length 801 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCMT1-208ENST00000486585 NISCHQ9Y2I1 1504 aa24.78■■□□□ 1.56
PCMT1-208ENST00000486585 ABCC9O60706 1549 aa22.43■■□□□ 1.18
PCMT1-208ENST00000486585 CCDC180Q9P1Z9 1646 aa22.38■■□□□ 1.17
PCMT1-208ENST00000486585 RB1CC1Q8TDY2 1594 aa21.37■■□□□ 1.01
PCMT1-208ENST00000486585 NACADO15069 1562 aa21.19■□□□□ 0.98
PCMT1-208ENST00000486585 DNAJC5BQ9UF47 199 aa21.12■□□□□ 0.97
PCMT1-208ENST00000486585 DCAF8L2P0C7V8 631 aa20.99■□□□□ 0.95
PCMT1-208ENST00000486585 MYO15BQ96JP2 1530 aa20.86■□□□□ 0.93
PCMT1-208ENST00000486585 UNC13AQ9UPW8 1703 aa20.85■□□□□ 0.93
PCMT1-208ENST00000486585 PABPN1Q86U42 306 aaKnown RBP eCLIP20.84■□□□□ 0.93
PCMT1-208ENST00000486585 BICRAQ9NZM4 1560 aa20.66■□□□□ 0.9
PCMT1-208ENST00000486585 DCAF1Q9Y4B6 1507 aa20.51■□□□□ 0.87
PCMT1-208ENST00000486585 SHROOM4Q9ULL8 1493 aa20.5■□□□□ 0.87
PCMT1-208ENST00000486585 ZCCHC6Q5VYS8 1495 aaKnown RBP20.48■□□□□ 0.87
PCMT1-208ENST00000486585 SCRIBQ14160 1630 aa20.29■□□□□ 0.84
PCMT1-208ENST00000486585 CC2D2AQ9P2K1 1620 aa20.29■□□□□ 0.84
PCMT1-208ENST00000486585 CECR2Q9BXF3 1484 aa20.26■□□□□ 0.83
PCMT1-208ENST00000486585 EIF4G1Q04637 1599 aaKnown RBP20.21■□□□□ 0.83
PCMT1-208ENST00000486585 DNAJC5Q9H3Z4 198 aa19.63■□□□□ 0.73
PCMT1-208ENST00000486585 NCAPD3P42695 1498 aa19.53■□□□□ 0.72
PCMT1-208ENST00000486585 CUX2O14529 1486 aa19.48■□□□□ 0.71
PCMT1-208ENST00000486585 ERCC6Q03468 1493 aa19.45■□□□□ 0.7
PCMT1-208ENST00000486585 SMARCA2P51531 1590 aa19.42■□□□□ 0.7
PCMT1-208ENST00000486585 ATAD2BQ9ULI0 1458 aa19.41■□□□□ 0.7
PCMT1-208ENST00000486585 HMGXB3Q12766 1538 aa19.38■□□□□ 0.69
PCMT1-208ENST00000486585 SMARCA4P51532 1647 aa19.36■□□□□ 0.69
PCMT1-208ENST00000486585 BAZ1AQ9NRL2 1556 aaPredicted RBP19.29■□□□□ 0.68
PCMT1-208ENST00000486585 BAZ1BQ9UIG0 1483 aaKnown RBP19.25■□□□□ 0.67
PCMT1-208ENST00000486585 PEG3Q9GZU2 1588 aa19.2■□□□□ 0.66
PCMT1-208ENST00000486585 NESP48681 1621 aa19.19■□□□□ 0.66
PCMT1-208ENST00000486585 LAMC3Q9Y6N6 1575 aa19.15■□□□□ 0.66
PCMT1-208ENST00000486585 THOC2Q8NI27 1593 aaKnown RBP19.07■□□□□ 0.64
PCMT1-208ENST00000486585 PDS5BQ9NTI5 1447 aa19.05■□□□□ 0.64
PCMT1-208ENST00000486585 MROH2BQ7Z745 1585 aa19.05■□□□□ 0.64
PCMT1-208ENST00000486585 KIF21AQ7Z4S6 1674 aa19■□□□□ 0.63
PCMT1-208ENST00000486585 CADPSQ9ULU8 1353 aa18.93■□□□□ 0.62
PCMT1-208ENST00000486585 MRC2Q9UBG0 1479 aa18.85■□□□□ 0.61
PCMT1-208ENST00000486585 WIZO95785 1651 aa18.82■□□□□ 0.6
PCMT1-208ENST00000486585 WDR62O43379 1518 aa18.79■□□□□ 0.6
PCMT1-208ENST00000486585 CEP164Q9UPV0 1460 aa18.76■□□□□ 0.59
PCMT1-208ENST00000486585 FANCD2Q9BXW9 1451 aa18.71■□□□□ 0.59
PCMT1-208ENST00000486585 CFTRP13569 1480 aa18.66■□□□□ 0.58
PCMT1-208ENST00000486585 TRIM41Q8WV44 630 aa18.66■□□□□ 0.58
PCMT1-208ENST00000486585 TOP2AP11388 1531 aaKnown RBP18.61■□□□□ 0.57
PCMT1-208ENST00000486585 RSF1Q96T23 1441 aaPredicted RBP18.61■□□□□ 0.57
PCMT1-208ENST00000486585 OSCARQ8IYS5 282 aa18.58■□□□□ 0.56
PCMT1-208ENST00000486585 PRDM2Q13029 1718 aa18.54■□□□□ 0.56
PCMT1-208ENST00000486585 URB2Q14146 1524 aaKnown RBP18.52■□□□□ 0.56
PCMT1-208ENST00000486585 IFT140Q96RY7 1462 aa18.39■□□□□ 0.54
PCMT1-208ENST00000486585 CCDC88BA6NC98 1476 aa18.38■□□□□ 0.53
PCMT1-208ENST00000486585 ABCC8Q09428 1581 aa18.37■□□□□ 0.53
PCMT1-208ENST00000486585 TOPBP1Q92547 1522 aa18.32■□□□□ 0.52
PCMT1-208ENST00000486585 ZNF608Q9ULD9 1512 aaPredicted RBP18.3■□□□□ 0.52
PCMT1-208ENST00000486585 RIMBP3CA6NJZ7 1639 aa18.29■□□□□ 0.52
PCMT1-208ENST00000486585 RIMBP3BA6NNM3 1639 aa18.29■□□□□ 0.52
PCMT1-208ENST00000486585 RIMBP3Q9UFD9 1639 aa18.29■□□□□ 0.52
PCMT1-208ENST00000486585 DNMBPQ6XZF7 1577 aa18.26■□□□□ 0.51
PCMT1-208ENST00000486585 EIF4G3O43432 1585 aaKnown RBP18.23■□□□□ 0.51
PCMT1-208ENST00000486585 ARHGEF11O15085 1522 aa18.22■□□□□ 0.51
PCMT1-208ENST00000486585 TARBP1Q13395 1621 aaKnown RBP18.17■□□□□ 0.5
PCMT1-208ENST00000486585 CHD1O14646 1710 aa18.15■□□□□ 0.5
PCMT1-208ENST00000486585 AQRO60306 1485 aaKnown RBP eCLIP18.14■□□□□ 0.492e-6■■■■■ 27.8
PCMT1-208ENST00000486585 CYB5RLQ6IPT4 315 aa18.11■□□□□ 0.49
PCMT1-208ENST00000486585 POLA1P09884 1462 aaPredicted RBP18.11■□□□□ 0.49
PCMT1-208ENST00000486585 FBLN2P98095 1184 aa18.1■□□□□ 0.49
PCMT1-208ENST00000486585 WDR97A6NE52 1622 aa18.06■□□□□ 0.48
PCMT1-208ENST00000486585 SOGA1O94964 1423 aa18.06■□□□□ 0.48
PCMT1-208ENST00000486585 RAD54L2Q9Y4B4 1467 aa18.01■□□□□ 0.47
PCMT1-208ENST00000486585 TDRD9Q8NDG6 1382 aaKnown RBP18.01■□□□□ 0.47
PCMT1-208ENST00000486585 ARAP1Q96P48 1450 aa18■□□□□ 0.47
PCMT1-208ENST00000486585 TRHP20396 242 aaPredicted RBP17.99■□□□□ 0.47
PCMT1-208ENST00000486585 FGD5Q6ZNL6 1462 aa17.97■□□□□ 0.47
PCMT1-208ENST00000486585 MAGI1Q96QZ7 1491 aaPredicted RBP17.96■□□□□ 0.47
PCMT1-208ENST00000486585 CHMP7Q8WUX9 453 aaPredicted RBP17.96■□□□□ 0.47
PCMT1-208ENST00000486585 SNAPC4Q5SXM2 1469 aa17.95■□□□□ 0.46
PCMT1-208ENST00000486585 SYNJ1O43426 1573 aa17.95■□□□□ 0.46
PCMT1-208ENST00000486585 GRIN2BQ13224 1484 aa17.94■□□□□ 0.46
PCMT1-208ENST00000486585 CUX1P39880 1505 aa17.92■□□□□ 0.46
PCMT1-208ENST00000486585 CLASP1Q7Z460 1538 aa17.91■□□□□ 0.46
PCMT1-208ENST00000486585 SYNJ2O15056 1496 aa17.88■□□□□ 0.45
PCMT1-208ENST00000486585 PBRM1Q86U86 1689 aa17.84■□□□□ 0.45
PCMT1-208ENST00000486585 GAPVD1Q14C86 1478 aa17.83■□□□□ 0.45
PCMT1-208ENST00000486585 ABCA10Q8WWZ4 1543 aa17.79■□□□□ 0.44
PCMT1-208ENST00000486585 ABCA5Q8WWZ7 1642 aa17.76■□□□□ 0.43
PCMT1-208ENST00000486585 WRNQ14191 1432 aaPredicted RBP eCLIP17.72■□□□□ 0.43
PCMT1-208ENST00000486585 GRIN2AQ12879 1464 aa17.68■□□□□ 0.42
PCMT1-208ENST00000486585 SUPT5HO00267 1087 aaKnown RBP17.67■□□□□ 0.42
PCMT1-208ENST00000486585 BIVM-ERCC5R4GMW8 1640 aa17.64■□□□□ 0.41
PCMT1-208ENST00000486585 ADAMTS12P58397 1594 aa17.63■□□□□ 0.41
PCMT1-208ENST00000486585 TOP2BQ02880 1626 aa17.63■□□□□ 0.41
PCMT1-208ENST00000486585 AEBP2Q6ZN18 517 aaPredicted RBP17.63■□□□□ 0.41
PCMT1-208ENST00000486585 FHAD1B1AJZ9 1412 aa17.62■□□□□ 0.41
PCMT1-208ENST00000486585 NUP160Q12769 1436 aa17.62■□□□□ 0.41
PCMT1-208ENST00000486585 CEP170Q5SW79 1584 aa17.6■□□□□ 0.41
PCMT1-208ENST00000486585 ERICH3Q5RHP9 1530 aa17.59■□□□□ 0.41
PCMT1-208ENST00000486585 SHROOM2Q13796 1616 aa17.57■□□□□ 0.4
PCMT1-208ENST00000486585 ERCC6L2Q5T890 1561 aa17.56■□□□□ 0.4
PCMT1-208ENST00000486585 PRG4Q92954 1404 aaPredicted RBP17.47■□□□□ 0.39
PCMT1-208ENST00000486585 JPH4Q96JJ6 628 aa17.47■□□□□ 0.39
PCMT1-208ENST00000486585 KIF13AQ9H1H9 1805 aa17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms