RNA–Protein interactions for RNA: ENST00000464889.5

PCMT1-205, Transcript of protein-L-isoaspartate (D-aspartate) O-methyltransferase, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCMT1, Length 1,984 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCMT1-205ENST00000464889 NISCHQ9Y2I1 1504 aa45.05■■■■■ 4.8
PCMT1-205ENST00000464889 CCDC180Q9P1Z9 1646 aa39.54■■■■□ 3.92
PCMT1-205ENST00000464889 ABCC9O60706 1549 aa37.92■■■■□ 3.66
PCMT1-205ENST00000464889 ZCCHC6Q5VYS8 1495 aaKnown RBP37.72■■■■□ 3.63
PCMT1-205ENST00000464889 DCAF8L2P0C7V8 631 aa37.47■■■■□ 3.59
PCMT1-205ENST00000464889 DCAF1Q9Y4B6 1507 aa37.23■■■■□ 3.55
PCMT1-205ENST00000464889 MYO15BQ96JP2 1530 aa36.99■■■■□ 3.51
PCMT1-205ENST00000464889 NACADO15069 1562 aa36.96■■■■□ 3.51
PCMT1-205ENST00000464889 RB1CC1Q8TDY2 1594 aa36.79■■■■□ 3.48
PCMT1-205ENST00000464889 SHROOM4Q9ULL8 1493 aa36.48■■■■□ 3.43
PCMT1-205ENST00000464889 SCRIBQ14160 1630 aa36.31■■■■□ 3.4
PCMT1-205ENST00000464889 UNC13AQ9UPW8 1703 aa36.03■■■■□ 3.36
PCMT1-205ENST00000464889 BICRAQ9NZM4 1560 aa35.67■■■■□ 3.3
PCMT1-205ENST00000464889 PABPN1Q86U42 306 aaKnown RBP eCLIP35.66■■■■□ 3.3
PCMT1-205ENST00000464889 SUPT5HO00267 1087 aaKnown RBP35.53■■■■□ 3.28
PCMT1-205ENST00000464889 CECR2Q9BXF3 1484 aa35.06■■■■□ 3.2
PCMT1-205ENST00000464889 BAZ1AQ9NRL2 1556 aaPredicted RBP34.84■■■■□ 3.17
PCMT1-205ENST00000464889 MROH2BQ7Z745 1585 aa34.79■■■■□ 3.16
PCMT1-205ENST00000464889 SMARCA4P51532 1647 aa34.75■■■■□ 3.15
PCMT1-205ENST00000464889 RSF1Q96T23 1441 aaPredicted RBP34.74■■■■□ 3.15
PCMT1-205ENST00000464889 EIF4G1Q04637 1599 aaKnown RBP34.66■■■■□ 3.14
PCMT1-205ENST00000464889 CHIC1Q5VXU3 224 aa34.51■■■■□ 3.11
PCMT1-205ENST00000464889 WIZO95785 1651 aa34.48■■■■□ 3.11
PCMT1-205ENST00000464889 PEG3Q9GZU2 1588 aa34.33■■■■□ 3.09
PCMT1-205ENST00000464889 ATAD2BQ9ULI0 1458 aa34.32■■■■□ 3.08
PCMT1-205ENST00000464889 SMARCA2P51531 1590 aa34.29■■■■□ 3.08
PCMT1-205ENST00000464889 CC2D2AQ9P2K1 1620 aa34.29■■■■□ 3.08
PCMT1-205ENST00000464889 NCAPD3P42695 1498 aa34.11■■■■□ 3.05
PCMT1-205ENST00000464889 BAZ1BQ9UIG0 1483 aaKnown RBP34.11■■■■□ 3.05
PCMT1-205ENST00000464889 TOP2AP11388 1531 aaKnown RBP34.1■■■■□ 3.05
PCMT1-205ENST00000464889 HMGXB3Q12766 1538 aa34.01■■■■□ 3.04
PCMT1-205ENST00000464889 DNAJC5BQ9UF47 199 aa33.94■■■■□ 3.02
PCMT1-205ENST00000464889 CCDC88BA6NC98 1476 aa33.75■■■□□ 2.99
PCMT1-205ENST00000464889 TRIM41Q8WV44 630 aa33.31■■■□□ 2.92
PCMT1-205ENST00000464889 LOC105371045A0A1W2PR82 267 aa33.22■■■□□ 2.91
PCMT1-205ENST00000464889 CADPSQ9ULU8 1353 aa33.21■■■□□ 2.91
PCMT1-205ENST00000464889 CFTRP13569 1480 aa33.2■■■□□ 2.91
PCMT1-205ENST00000464889 NESP48681 1621 aa33.11■■■□□ 2.89
PCMT1-205ENST00000464889 LAMC3Q9Y6N6 1575 aa33.05■■■□□ 2.88
PCMT1-205ENST00000464889 PRDM2Q13029 1718 aa33■■■□□ 2.87
PCMT1-205ENST00000464889 ABCC8Q09428 1581 aa32.88■■■□□ 2.85
PCMT1-205ENST00000464889 FANCD2Q9BXW9 1451 aa32.85■■■□□ 2.85
PCMT1-205ENST00000464889 PDS5BQ9NTI5 1447 aa32.83■■■□□ 2.85
PCMT1-205ENST00000464889 FAM9AQ8IZU1 332 aaPredicted RBP32.76■■■□□ 2.84
PCMT1-205ENST00000464889 WRNQ14191 1432 aaPredicted RBP eCLIP32.73■■■□□ 2.83
PCMT1-205ENST00000464889 PCGF6Q9BYE7 350 aa32.72■■■□□ 2.83
PCMT1-205ENST00000464889 KIF21AQ7Z4S6 1674 aa32.71■■■□□ 2.83
PCMT1-205ENST00000464889 CEP164Q9UPV0 1460 aa32.7■■■□□ 2.83
PCMT1-205ENST00000464889 SYNJ1O43426 1573 aa32.61■■■□□ 2.81
PCMT1-205ENST00000464889 ERCC6Q03468 1493 aa32.58■■■□□ 2.81
PCMT1-205ENST00000464889 HRCP23327 699 aa32.58■■■□□ 2.81
PCMT1-205ENST00000464889 CUX1P39880 1505 aa32.56■■■□□ 2.8
PCMT1-205ENST00000464889 TOP2BQ02880 1626 aa32.51■■■□□ 2.8
PCMT1-205ENST00000464889 BIVM-ERCC5R4GMW8 1640 aa32.48■■■□□ 2.79
PCMT1-205ENST00000464889 TRIM26Q12899 539 aaPredicted RBP32.47■■■□□ 2.79
PCMT1-205ENST00000464889 URB2Q14146 1524 aaKnown RBP32.46■■■□□ 2.79
PCMT1-205ENST00000464889 DNMBPQ6XZF7 1577 aa32.44■■■□□ 2.78
PCMT1-205ENST00000464889 TOPBP1Q92547 1522 aa32.43■■■□□ 2.78
PCMT1-205ENST00000464889 MRC2Q9UBG0 1479 aa32.43■■■□□ 2.78
PCMT1-205ENST00000464889 EEA1Q15075 1411 aa32.37■■■□□ 2.77
PCMT1-205ENST00000464889 FGD5Q6ZNL6 1462 aa32.3■■■□□ 2.76
PCMT1-205ENST00000464889 THOC2Q8NI27 1593 aaKnown RBP32.3■■■□□ 2.76
PCMT1-205ENST00000464889 EHMT2Q96KQ7 1210 aa32.29■■■□□ 2.76
PCMT1-205ENST00000464889 WDR62O43379 1518 aa32.27■■■□□ 2.76
PCMT1-205ENST00000464889 SOGA1O94964 1423 aa32.25■■■□□ 2.75
PCMT1-205ENST00000464889 POLA1P09884 1462 aaPredicted RBP32.23■■■□□ 2.75
PCMT1-205ENST00000464889 RAD54L2Q9Y4B4 1467 aa32.13■■■□□ 2.73
PCMT1-205ENST00000464889 RUSC2Q8N2Y8 1516 aa32.09■■■□□ 2.73
PCMT1-205ENST00000464889 CSRNP3Q8WYN3 585 aa32.07■■■□□ 2.72
PCMT1-205ENST00000464889 TNIKQ9UKE5 1360 aa32.04■■■□□ 2.72
PCMT1-205ENST00000464889 CUX2O14529 1486 aa32.04■■■□□ 2.72
PCMT1-205ENST00000464889 GOLGA3Q08378 1498 aa32■■■□□ 2.71
PCMT1-205ENST00000464889 ABCA10Q8WWZ4 1543 aa32■■■□□ 2.71
PCMT1-205ENST00000464889 CEP162Q5TB80 1403 aa31.98■■■□□ 2.71
PCMT1-205ENST00000464889 TARBP1Q13395 1621 aaKnown RBP31.98■■■□□ 2.71
PCMT1-205ENST00000464889 KIF27Q86VH2 1401 aa31.95■■■□□ 2.71
PCMT1-205ENST00000464889 KIF21BO75037 1637 aa31.95■■■□□ 2.7
PCMT1-205ENST00000464889 IFT140Q96RY7 1462 aa31.94■■■□□ 2.7
PCMT1-205ENST00000464889 WDR97A6NE52 1622 aa31.93■■■□□ 2.7
PCMT1-205ENST00000464889 TDRD9Q8NDG6 1382 aaKnown RBP31.88■■■□□ 2.69
PCMT1-205ENST00000464889 ZNF608Q9ULD9 1512 aaPredicted RBP31.8■■■□□ 2.68
PCMT1-205ENST00000464889 ABCA5Q8WWZ7 1642 aa31.77■■■□□ 2.68
PCMT1-205ENST00000464889 AQRO60306 1485 aaKnown RBP eCLIP31.76■■■□□ 2.687e-7■■■□□ 17.5
PCMT1-205ENST00000464889 GAPVD1Q14C86 1478 aa31.76■■■□□ 2.68
PCMT1-205ENST00000464889 UBTFP17480 764 aaKnown RBP31.76■■■□□ 2.67
PCMT1-205ENST00000464889 IGF1RP08069 1367 aa31.71■■■□□ 2.67
PCMT1-205ENST00000464889 PPARGC1BQ86YN6 1023 aaKnown RBP31.68■■■□□ 2.66
PCMT1-205ENST00000464889 EIF4G3O43432 1585 aaKnown RBP31.68■■■□□ 2.66
PCMT1-205ENST00000464889 ZEB1P37275 1124 aaPredicted RBP31.67■■■□□ 2.66
PCMT1-205ENST00000464889 PBRM1Q86U86 1689 aa31.62■■■□□ 2.65
PCMT1-205ENST00000464889 ERICH3Q5RHP9 1530 aa31.61■■■□□ 2.65
PCMT1-205ENST00000464889 GRIN2BQ13224 1484 aa31.6■■■□□ 2.65
PCMT1-205ENST00000464889 PRXQ9BXM0 1461 aa31.57■■■□□ 2.64
PCMT1-205ENST00000464889 RAPGEF2Q9Y4G8 1499 aa31.57■■■□□ 2.64
PCMT1-205ENST00000464889 CARMIL1Q5VZK9 1371 aa31.56■■■□□ 2.64
PCMT1-205ENST00000464889 CUL7Q14999 1698 aa31.52■■■□□ 2.64
PCMT1-205ENST00000464889 CLIP1P30622 1438 aa31.5■■■□□ 2.63
PCMT1-205ENST00000464889 SNAPC4Q5SXM2 1469 aa31.46■■■□□ 2.63
PCMT1-205ENST00000464889 ADAMTS12P58397 1594 aa31.41■■■□□ 2.62
PCMT1-205ENST00000464889 FHAD1B1AJZ9 1412 aa31.4■■■□□ 2.62
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms