RNA–Protein interactions for RNA: ENST00000597369.1

IRF3-218, Transcript of interferon regulatory factor 3, humanhuman

TSL 2

Gene IRF3, Length 550 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-218ENST00000597369 NISCHQ9Y2I1 1504 aa33.9■■■■□ 3.02
IRF3-218ENST00000597369 ABCC9O60706 1549 aa31.82■■■□□ 2.68
IRF3-218ENST00000597369 CCDC180Q9P1Z9 1646 aa30.91■■■□□ 2.54
IRF3-218ENST00000597369 DNAJC5BQ9UF47 199 aa30.85■■■□□ 2.53
IRF3-218ENST00000597369 RB1CC1Q8TDY2 1594 aa29.9■■■□□ 2.38
IRF3-218ENST00000597369 NACADO15069 1562 aa29.47■■■□□ 2.31
IRF3-218ENST00000597369 PABPN1Q86U42 306 aaKnown RBP eCLIP29.46■■■□□ 2.31
IRF3-218ENST00000597369 UNC13AQ9UPW8 1703 aa29.25■■■□□ 2.27
IRF3-218ENST00000597369 DNAJC5Q9H3Z4 198 aa29.15■■■□□ 2.26
IRF3-218ENST00000597369 BICRAQ9NZM4 1560 aa29.09■■■□□ 2.25
IRF3-218ENST00000597369 DCAF8L2P0C7V8 631 aa28.96■■■□□ 2.23
IRF3-218ENST00000597369 CECR2Q9BXF3 1484 aa28.82■■■□□ 2.2
IRF3-218ENST00000597369 MYO15BQ96JP2 1530 aa28.79■■■□□ 2.2
IRF3-218ENST00000597369 CC2D2AQ9P2K1 1620 aa28.75■■■□□ 2.19
IRF3-218ENST00000597369 SHROOM4Q9ULL8 1493 aa28.65■■■□□ 2.18
IRF3-218ENST00000597369 EIF4G1Q04637 1599 aaKnown RBP28.44■■■□□ 2.14
IRF3-218ENST00000597369 DCAF1Q9Y4B6 1507 aa28.01■■■□□ 2.07
IRF3-218ENST00000597369 SCRIBQ14160 1630 aa27.98■■■□□ 2.07
IRF3-218ENST00000597369 CUX2O14529 1486 aa27.95■■■□□ 2.06
IRF3-218ENST00000597369 ZCCHC6Q5VYS8 1495 aaKnown RBP27.86■■■□□ 2.05
IRF3-218ENST00000597369 ERCC6Q03468 1493 aa27.56■■■□□ 2
IRF3-218ENST00000597369 TRIM41Q8WV44 630 aa27.3■■□□□ 1.96
IRF3-218ENST00000597369 NCAPD3P42695 1498 aa27.24■■□□□ 1.95
IRF3-218ENST00000597369 NESP48681 1621 aa27.05■■□□□ 1.92
IRF3-218ENST00000597369 THOC2Q8NI27 1593 aaKnown RBP27.02■■□□□ 1.92
IRF3-218ENST00000597369 ATAD2BQ9ULI0 1458 aa26.96■■□□□ 1.91
IRF3-218ENST00000597369 HMGXB3Q12766 1538 aa26.91■■□□□ 1.9
IRF3-218ENST00000597369 SMARCA2P51531 1590 aa26.84■■□□□ 1.89
IRF3-218ENST00000597369 LAMC3Q9Y6N6 1575 aa26.77■■□□□ 1.88
IRF3-218ENST00000597369 KIF21AQ7Z4S6 1674 aa26.7■■□□□ 1.87
IRF3-218ENST00000597369 SMARCA4P51532 1647 aa26.65■■□□□ 1.86
IRF3-218ENST00000597369 PDS5BQ9NTI5 1447 aa26.65■■□□□ 1.86
IRF3-218ENST00000597369 BAZ1BQ9UIG0 1483 aaKnown RBP26.61■■□□□ 1.85
IRF3-218ENST00000597369 BAZ1AQ9NRL2 1556 aaPredicted RBP26.51■■□□□ 1.83
IRF3-218ENST00000597369 OSCARQ8IYS5 282 aa26.5■■□□□ 1.83
IRF3-218ENST00000597369 PEG3Q9GZU2 1588 aa26.48■■□□□ 1.83
IRF3-218ENST00000597369 MRC2Q9UBG0 1479 aa26.44■■□□□ 1.82
IRF3-218ENST00000597369 WDR62O43379 1518 aa26.44■■□□□ 1.82
IRF3-218ENST00000597369 CADPSQ9ULU8 1353 aa26.33■■□□□ 1.8
IRF3-218ENST00000597369 RIMBP3CA6NJZ7 1639 aa26.23■■□□□ 1.79
IRF3-218ENST00000597369 RIMBP3BA6NNM3 1639 aa26.23■■□□□ 1.79
IRF3-218ENST00000597369 RIMBP3Q9UFD9 1639 aa26.23■■□□□ 1.79
IRF3-218ENST00000597369 CEP164Q9UPV0 1460 aa26.11■■□□□ 1.77
IRF3-218ENST00000597369 MROH2BQ7Z745 1585 aa26.07■■□□□ 1.76
IRF3-218ENST00000597369 ARHGEF11O15085 1522 aa26.04■■□□□ 1.76
IRF3-218ENST00000597369 FANCD2Q9BXW9 1451 aa25.99■■□□□ 1.75
IRF3-218ENST00000597369 AEBP2Q6ZN18 517 aaPredicted RBP25.95■■□□□ 1.74
IRF3-218ENST00000597369 TRHP20396 242 aaPredicted RBP25.91■■□□□ 1.74
IRF3-218ENST00000597369 CYB5RLQ6IPT4 315 aa25.9■■□□□ 1.74
IRF3-218ENST00000597369 URB2Q14146 1524 aaKnown RBP25.85■■□□□ 1.73
IRF3-218ENST00000597369 CFTRP13569 1480 aa25.82■■□□□ 1.72
IRF3-218ENST00000597369 WIZO95785 1651 aa25.71■■□□□ 1.71
IRF3-218ENST00000597369 ARAP1Q96P48 1450 aa25.7■■□□□ 1.7
IRF3-218ENST00000597369 ZNF608Q9ULD9 1512 aaPredicted RBP25.68■■□□□ 1.7
IRF3-218ENST00000597369 IFT140Q96RY7 1462 aa25.66■■□□□ 1.7
IRF3-218ENST00000597369 RSF1Q96T23 1441 aaPredicted RBP25.58■■□□□ 1.69
IRF3-218ENST00000597369 CHD1O14646 1710 aa25.51■■□□□ 1.68
IRF3-218ENST00000597369 EIF4G3O43432 1585 aaKnown RBP25.49■■□□□ 1.67
IRF3-218ENST00000597369 PRDM2Q13029 1718 aa25.49■■□□□ 1.67
IRF3-218ENST00000597369 TOPBP1Q92547 1522 aa25.39■■□□□ 1.66
IRF3-218ENST00000597369 FBLN2P98095 1184 aa25.33■■□□□ 1.65
IRF3-218ENST00000597369 ABCC8Q09428 1581 aa25.33■■□□□ 1.65
IRF3-218ENST00000597369 AQRO60306 1485 aaKnown RBP eCLIP25.33■■□□□ 1.659e-19■■■■□ 25.2
IRF3-218ENST00000597369 TOP2AP11388 1531 aaKnown RBP25.32■■□□□ 1.64
IRF3-218ENST00000597369 TARBP1Q13395 1621 aaKnown RBP25.28■■□□□ 1.64
IRF3-218ENST00000597369 DNMBPQ6XZF7 1577 aa25.22■■□□□ 1.63
IRF3-218ENST00000597369 CLASP1Q7Z460 1538 aa25.22■■□□□ 1.63
IRF3-218ENST00000597369 SYNJ1O43426 1573 aa25.1■■□□□ 1.61
IRF3-218ENST00000597369 POLA1P09884 1462 aaPredicted RBP25.07■■□□□ 1.6
IRF3-218ENST00000597369 CCDC88BA6NC98 1476 aa25.05■■□□□ 1.6
IRF3-218ENST00000597369 CHMP7Q8WUX9 453 aaPredicted RBP25.03■■□□□ 1.6
IRF3-218ENST00000597369 GAPVD1Q14C86 1478 aa25.02■■□□□ 1.6
IRF3-218ENST00000597369 SNAPC4Q5SXM2 1469 aa25.02■■□□□ 1.6
IRF3-218ENST00000597369 ILDR1Q86SU0 546 aaPredicted RBP25■■□□□ 1.59
IRF3-218ENST00000597369 TDRD9Q8NDG6 1382 aaKnown RBP25■■□□□ 1.59
IRF3-218ENST00000597369 WDR97A6NE52 1622 aa24.99■■□□□ 1.59
IRF3-218ENST00000597369 MAGI1Q96QZ7 1491 aaPredicted RBP24.96■■□□□ 1.59
IRF3-218ENST00000597369 RAD54L2Q9Y4B4 1467 aa24.96■■□□□ 1.59
IRF3-218ENST00000597369 SOGA1O94964 1423 aa24.94■■□□□ 1.58
IRF3-218ENST00000597369 SYNJ2O15056 1496 aa24.89■■□□□ 1.58
IRF3-218ENST00000597369 GRIN2BQ13224 1484 aa24.84■■□□□ 1.57
IRF3-218ENST00000597369 KIF13AQ9H1H9 1805 aa24.79■■□□□ 1.56
IRF3-218ENST00000597369 FGD5Q6ZNL6 1462 aa24.73■■□□□ 1.55
IRF3-218ENST00000597369 KDM4FA0A1W2PPD8 638 aa24.7■■□□□ 1.54
IRF3-218ENST00000597369 ERCC6L2Q5T890 1561 aa24.7■■□□□ 1.54
IRF3-218ENST00000597369 PBRM1Q86U86 1689 aa24.66■■□□□ 1.54
IRF3-218ENST00000597369 CEP170Q5SW79 1584 aa24.59■■□□□ 1.53
IRF3-218ENST00000597369 CUX1P39880 1505 aa24.56■■□□□ 1.52
IRF3-218ENST00000597369 SHROOM2Q13796 1616 aa24.53■■□□□ 1.52
IRF3-218ENST00000597369 GRIN2AQ12879 1464 aa24.51■■□□□ 1.51
IRF3-218ENST00000597369 ABCC10Q5T3U5 1492 aa24.51■■□□□ 1.51
IRF3-218ENST00000597369 NUP160Q12769 1436 aa24.51■■□□□ 1.51
IRF3-218ENST00000597369 FAM69CQ0P6D2 419 aa24.5■■□□□ 1.51
IRF3-218ENST00000597369 ABCA5Q8WWZ7 1642 aa24.48■■□□□ 1.51
IRF3-218ENST00000597369 ABCA10Q8WWZ4 1543 aa24.45■■□□□ 1.5
IRF3-218ENST00000597369 KDM6BO15054 1643 aa24.44■■□□□ 1.5
IRF3-218ENST00000597369 MAPKBP1O60336 1514 aa24.4■■□□□ 1.5
IRF3-218ENST00000597369 DIP2BQ9P265 1576 aa24.39■■□□□ 1.5
IRF3-218ENST00000597369 ADAMTS12P58397 1594 aa24.34■■□□□ 1.49
IRF3-218ENST00000597369 NPM1P06748 294 aaKnown RBP eCLIP24.33■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms