RNA–Protein interactions for RNA: ENST00000615603.4

FOXP1-222, Transcript of forkhead box P1, humanhuman

TSL 5 BASIC

Gene FOXP1, Length 7,140 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXP1-222ENST00000615603 DCAF8L2P0C7V8 631 aa25.44■■□□□ 1.66
FOXP1-222ENST00000615603 SUPT5HO00267 1087 aaKnown RBP23.77■■□□□ 1.4
FOXP1-222ENST00000615603 NISCHQ9Y2I1 1504 aa23.74■■□□□ 1.39
FOXP1-222ENST00000615603 SHROOM4Q9ULL8 1493 aa23.4■■□□□ 1.34
FOXP1-222ENST00000615603 EHMT2Q96KQ7 1210 aa23.14■■□□□ 1.3
FOXP1-222ENST00000615603 APLP2Q06481 763 aa22.62■■□□□ 1.21
FOXP1-222ENST00000615603 FAM9AQ8IZU1 332 aaPredicted RBP22.48■■□□□ 1.19
FOXP1-222ENST00000615603 TTBK1Q5TCY1 1321 aaPredicted RBP22.29■■□□□ 1.16
FOXP1-222ENST00000615603 RANGAP1P46060 587 aaPredicted RBP22.23■■□□□ 1.15
FOXP1-222ENST00000615603 ATP1B4Q9UN42 357 aaPredicted RBP22.05■■□□□ 1.12
FOXP1-222ENST00000615603 TRIM41Q8WV44 630 aa21.97■■□□□ 1.11
FOXP1-222ENST00000615603 PELP1Q8IZL8 1130 aaKnown RBP21.94■■□□□ 1.1
FOXP1-222ENST00000615603 PCGF6Q9BYE7 350 aa21.85■■□□□ 1.09
FOXP1-222ENST00000615603 UBTFP17480 764 aaKnown RBP21.82■■□□□ 1.08
FOXP1-222ENST00000615603 CCER1Q8TC90 406 aaPredicted RBP21.56■■□□□ 1.04
FOXP1-222ENST00000615603 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.35■■□□□ 1.01
FOXP1-222ENST00000615603 HNRNPUL2Q1KMD3 747 aaKnown RBP21.35■■□□□ 1.01
FOXP1-222ENST00000615603 MYT1LQ9UL68 1186 aa21.35■■□□□ 1.01
FOXP1-222ENST00000615603 PPARGC1BQ86YN6 1023 aaKnown RBP21.34■■□□□ 1.01
FOXP1-222ENST00000615603 ZEB1P37275 1124 aaPredicted RBP21.31■■□□□ 1
FOXP1-222ENST00000615603 CENPBP07199 599 aaPredicted RBP21.21■□□□□ 0.99
FOXP1-222ENST00000615603 ITGAEP38570 1179 aa21.15■□□□□ 0.98
FOXP1-222ENST00000615603 ERICH6Q7L0X2 663 aa21.06■□□□□ 0.96
FOXP1-222ENST00000615603 PABPN1Q86U42 306 aaKnown RBP eCLIP21.02■□□□□ 0.96
FOXP1-222ENST00000615603 YTHDC1Q96MU7 727 aaKnown RBP21■□□□□ 0.95
FOXP1-222ENST00000615603 ABCC9O60706 1549 aa20.98■□□□□ 0.95
FOXP1-222ENST00000615603 POLR3GLQ9BT43 218 aa20.97■□□□□ 0.95
FOXP1-222ENST00000615603 NEFLP07196 543 aa20.97■□□□□ 0.95
FOXP1-222ENST00000615603 CHIC1Q5VXU3 224 aa20.96■□□□□ 0.95
FOXP1-222ENST00000615603 LOC105371045A0A1W2PR82 267 aa20.87■□□□□ 0.93
FOXP1-222ENST00000615603 TRIM26Q12899 539 aaPredicted RBP20.83■□□□□ 0.93
FOXP1-222ENST00000615603 CNGB1Q14028 1251 aaPredicted RBP20.77■□□□□ 0.92
FOXP1-222ENST00000615603 SLC4A1APQ9BWU0 796 aaKnown RBP20.68■□□□□ 0.9
FOXP1-222ENST00000615603 FBLN2P98095 1184 aa20.64■□□□□ 0.89
FOXP1-222ENST00000615603 FAM50AQ14320 339 aaKnown RBP20.58■□□□□ 0.89
FOXP1-222ENST00000615603 TRIM52Q96A61 297 aa20.5■□□□□ 0.87
FOXP1-222ENST00000615603 HRCP23327 699 aa20.46■□□□□ 0.87
FOXP1-222ENST00000615603 DAXXQ9UER7 740 aaPredicted RBP20.38■□□□□ 0.85
FOXP1-222ENST00000615603 NEUROD1Q13562 356 aa20.31■□□□□ 0.84
FOXP1-222ENST00000615603 ARID3CA6NKF2 412 aa20.3■□□□□ 0.84
FOXP1-222ENST00000615603 ZNF326Q5BKZ1 582 aaKnown RBP20.29■□□□□ 0.84
FOXP1-222ENST00000615603 P3H3Q8IVL6 736 aa20.25■□□□□ 0.83
FOXP1-222ENST00000615603 BCANQ96GW7 911 aa20.16■□□□□ 0.82
FOXP1-222ENST00000615603 CLSPNQ9HAW4 1339 aa20.13■□□□□ 0.81
FOXP1-222ENST00000615603 ZNF777Q9ULD5 760 aaPredicted RBP20.1■□□□□ 0.81
FOXP1-222ENST00000615603 DIEXFQ68CQ4 756 aaKnown RBP20.06■□□□□ 0.8
FOXP1-222ENST00000615603 CSRNP3Q8WYN3 585 aa20.04■□□□□ 0.8
FOXP1-222ENST00000615603 SLC24A1O60721 1099 aa20■□□□□ 0.79
FOXP1-222ENST00000615603 ESF1Q9H501 851 aaKnown RBP19.98■□□□□ 0.79
FOXP1-222ENST00000615603 CDK11AQ9UQ88 783 aaPredicted RBP19.98■□□□□ 0.79
FOXP1-222ENST00000615603 SCRIBQ14160 1630 aa19.95■□□□□ 0.78
FOXP1-222ENST00000615603 PLPPR3Q6T4P5 718 aa19.93■□□□□ 0.78
FOXP1-222ENST00000615603 NPM1P06748 294 aaKnown RBP eCLIP19.92■□□□□ 0.78
FOXP1-222ENST00000615603 ANP32CO43423 234 aa19.9■□□□□ 0.78
FOXP1-222ENST00000615603 ZNF316A6NFI3 1004 aaPredicted RBP19.89■□□□□ 0.77
FOXP1-222ENST00000615603 ZBTB47Q9UFB7 747 aaPredicted RBP19.85■□□□□ 0.77
FOXP1-222ENST00000615603 NEFMP07197 916 aa19.84■□□□□ 0.77
FOXP1-222ENST00000615603 CHGAP10645 457 aaKnown RBP19.83■□□□□ 0.77
FOXP1-222ENST00000615603 BCL11AQ9H165 835 aa19.83■□□□□ 0.77
FOXP1-222ENST00000615603 STAG3Q9UJ98 1225 aa19.83■□□□□ 0.76
FOXP1-222ENST00000615603 MYT1Q01538 1121 aa19.78■□□□□ 0.76
FOXP1-222ENST00000615603 CANXP27824 592 aaKnown RBP19.76■□□□□ 0.75
FOXP1-222ENST00000615603 RTL5Q5HYW3 569 aaPredicted RBP19.69■□□□□ 0.74
FOXP1-222ENST00000615603 CHMP7Q8WUX9 453 aaPredicted RBP19.66■□□□□ 0.74
FOXP1-222ENST00000615603 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.64■□□□□ 0.732e-6■■■□□ 17.4
FOXP1-222ENST00000615603 CHIC2Q9UKJ5 165 aa19.62■□□□□ 0.73
FOXP1-222ENST00000615603 TONSLQ96HA7 1378 aa19.55■□□□□ 0.72
FOXP1-222ENST00000615603 ZCCHC6Q5VYS8 1495 aaKnown RBP19.54■□□□□ 0.72
FOXP1-222ENST00000615603 TSPY4P0CV99 314 aa19.53■□□□□ 0.72
FOXP1-222ENST00000615603 TSPY10P0CW01 314 aa19.53■□□□□ 0.72
FOXP1-222ENST00000615603 KCNH8Q96L42 1107 aa19.46■□□□□ 0.71
FOXP1-222ENST00000615603 GTF3C3Q9Y5Q9 886 aa19.44■□□□□ 0.7
FOXP1-222ENST00000615603 MTUS2Q5JR59 1369 aa19.44■□□□□ 0.7
FOXP1-222ENST00000615603 KDM2AQ9Y2K7 1162 aa19.41■□□□□ 0.7
FOXP1-222ENST00000615603 SCAF1Q9H7N4 1312 aaKnown RBP19.41■□□□□ 0.7
FOXP1-222ENST00000615603 SENP3Q9H4L4 574 aaPredicted RBP19.4■□□□□ 0.7
FOXP1-222ENST00000615603 SALL2Q9Y467 1007 aaPredicted RBP19.35■□□□□ 0.69
FOXP1-222ENST00000615603 RB1CC1Q8TDY2 1594 aa19.33■□□□□ 0.69
FOXP1-222ENST00000615603 DDX10Q13206 875 aaKnown RBP19.33■□□□□ 0.68
FOXP1-222ENST00000615603 FAM9BQ8IZU0 186 aa19.32■□□□□ 0.68
FOXP1-222ENST00000615603 PLEKHD1A6NEE1 506 aa19.31■□□□□ 0.68
FOXP1-222ENST00000615603 PLEKHG5O94827 1062 aa19.31■□□□□ 0.68
FOXP1-222ENST00000615603 A0A0G2JS52 829 aa19.3■□□□□ 0.68
FOXP1-222ENST00000615603 PPP1R15AO75807 674 aaPredicted RBP19.3■□□□□ 0.68
FOXP1-222ENST00000615603 RRP7BPQ9NSQ0 103 aa19.27■□□□□ 0.68
FOXP1-222ENST00000615603 HNRNPUQ00839 825 aaKnown RBP eCLIP19.27■□□□□ 0.68
FOXP1-222ENST00000615603 ARID4BQ4LE39 1312 aaPredicted RBP19.27■□□□□ 0.67
FOXP1-222ENST00000615603 C14orf37Q86TY3 774 aa19.25■□□□□ 0.67
FOXP1-222ENST00000615603 TMC1Q8TDI8 760 aa19.24■□□□□ 0.67
FOXP1-222ENST00000615603 ZBTB7CA1YPR0 619 aa19.24■□□□□ 0.67
FOXP1-222ENST00000615603 CLIP1P30622 1438 aa19.23■□□□□ 0.67
FOXP1-222ENST00000615603 NPM2Q86SE8 214 aaKnown RBP19.23■□□□□ 0.67
FOXP1-222ENST00000615603 CCDC180Q9P1Z9 1646 aa19.22■□□□□ 0.67
FOXP1-222ENST00000615603 WDR43Q15061 677 aaKnown RBP eCLIP19.2■□□□□ 0.66
FOXP1-222ENST00000615603 ANP32AP39687 249 aaKnown RBP19.17■□□□□ 0.66
FOXP1-222ENST00000615603 ERCC6Q03468 1493 aa19.16■□□□□ 0.66
FOXP1-222ENST00000615603 BAZ1BQ9UIG0 1483 aaKnown RBP19.16■□□□□ 0.66
FOXP1-222ENST00000615603 RGL3Q3MIN7 710 aa19.16■□□□□ 0.66
FOXP1-222ENST00000615603 HIRIP3Q9BW71 556 aaPredicted RBP19.13■□□□□ 0.65
FOXP1-222ENST00000615603 CFDP1Q9UEE9 299 aaPredicted RBP19.13■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms