RNA–Protein interactions for RNA: ENST00000544496.5

PCMT1-211, Transcript of protein-L-isoaspartate (D-aspartate) O-methyltransferase, humanhuman

TSL 2 BASIC

Gene PCMT1, Length 1,628 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCMT1-211ENST00000544496 NISCHQ9Y2I1 1504 aa53.29■■■■■ 6.12
PCMT1-211ENST00000544496 CCDC180Q9P1Z9 1646 aa46.61■■■■■ 5.05
PCMT1-211ENST00000544496 ZCCHC6Q5VYS8 1495 aaKnown RBP44.73■■■■■ 4.75
PCMT1-211ENST00000544496 DCAF1Q9Y4B6 1507 aa44.18■■■■■ 4.66
PCMT1-211ENST00000544496 ABCC9O60706 1549 aa44.08■■■■■ 4.65
PCMT1-211ENST00000544496 DCAF8L2P0C7V8 631 aa43.99■■■■■ 4.63
PCMT1-211ENST00000544496 MYO15BQ96JP2 1530 aa43.76■■■■■ 4.6
PCMT1-211ENST00000544496 NACADO15069 1562 aa43.48■■■■■ 4.55
PCMT1-211ENST00000544496 SHROOM4Q9ULL8 1493 aa43.17■■■■■ 4.5
PCMT1-211ENST00000544496 RB1CC1Q8TDY2 1594 aa43.13■■■■■ 4.49
PCMT1-211ENST00000544496 SCRIBQ14160 1630 aa42.68■■■■■ 4.42
PCMT1-211ENST00000544496 UNC13AQ9UPW8 1703 aa42.05■■■■■ 4.32
PCMT1-211ENST00000544496 BICRAQ9NZM4 1560 aa41.68■■■■■ 4.26
PCMT1-211ENST00000544496 SUPT5HO00267 1087 aaKnown RBP41.54■■■■■ 4.24
PCMT1-211ENST00000544496 PABPN1Q86U42 306 aaKnown RBP eCLIP41.5■■■■■ 4.23
PCMT1-211ENST00000544496 CECR2Q9BXF3 1484 aa41.31■■■■■ 4.2
PCMT1-211ENST00000544496 RSF1Q96T23 1441 aaPredicted RBP41.24■■■■■ 4.19
PCMT1-211ENST00000544496 BAZ1AQ9NRL2 1556 aaPredicted RBP41.22■■■■■ 4.19
PCMT1-211ENST00000544496 MROH2BQ7Z745 1585 aa41.08■■■■■ 4.17
PCMT1-211ENST00000544496 SMARCA4P51532 1647 aa40.98■■■■■ 4.15
PCMT1-211ENST00000544496 WIZO95785 1651 aa40.71■■■■■ 4.11
PCMT1-211ENST00000544496 PEG3Q9GZU2 1588 aa40.56■■■■■ 4.08
PCMT1-211ENST00000544496 EIF4G1Q04637 1599 aaKnown RBP40.5■■■■■ 4.07
PCMT1-211ENST00000544496 SMARCA2P51531 1590 aa40.42■■■■■ 4.06
PCMT1-211ENST00000544496 TOP2AP11388 1531 aaKnown RBP40.4■■■■■ 4.06
PCMT1-211ENST00000544496 ATAD2BQ9ULI0 1458 aa40.37■■■■■ 4.05
PCMT1-211ENST00000544496 BAZ1BQ9UIG0 1483 aaKnown RBP40.15■■■■■ 4.02
PCMT1-211ENST00000544496 NCAPD3P42695 1498 aa40.11■■■■■ 4.01
PCMT1-211ENST00000544496 HMGXB3Q12766 1538 aa40.04■■■■■ 4
PCMT1-211ENST00000544496 CCDC88BA6NC98 1476 aa39.94■■■■□ 3.98
PCMT1-211ENST00000544496 CC2D2AQ9P2K1 1620 aa39.92■■■■□ 3.98
PCMT1-211ENST00000544496 CHIC1Q5VXU3 224 aa39.71■■■■□ 3.95
PCMT1-211ENST00000544496 TRIM41Q8WV44 630 aa39.18■■■■□ 3.86
PCMT1-211ENST00000544496 CFTRP13569 1480 aa39.15■■■■□ 3.86
PCMT1-211ENST00000544496 CADPSQ9ULU8 1353 aa39.06■■■■□ 3.84
PCMT1-211ENST00000544496 ABCC8Q09428 1581 aa38.95■■■■□ 3.83
PCMT1-211ENST00000544496 DNAJC5BQ9UF47 199 aa38.92■■■■□ 3.82
PCMT1-211ENST00000544496 PRDM2Q13029 1718 aa38.9■■■■□ 3.82
PCMT1-211ENST00000544496 WRNQ14191 1432 aaPredicted RBP eCLIP38.88■■■■□ 3.81
PCMT1-211ENST00000544496 LAMC3Q9Y6N6 1575 aa38.78■■■■□ 3.8
PCMT1-211ENST00000544496 SYNJ1O43426 1573 aa38.61■■■■□ 3.77
PCMT1-211ENST00000544496 NESP48681 1621 aa38.59■■■■□ 3.77
PCMT1-211ENST00000544496 FANCD2Q9BXW9 1451 aa38.58■■■■□ 3.77
PCMT1-211ENST00000544496 TOP2BQ02880 1626 aa38.56■■■■□ 3.76
PCMT1-211ENST00000544496 PDS5BQ9NTI5 1447 aa38.52■■■■□ 3.76
PCMT1-211ENST00000544496 BIVM-ERCC5R4GMW8 1640 aa38.52■■■■□ 3.76
PCMT1-211ENST00000544496 CUX1P39880 1505 aa38.43■■■■□ 3.74
PCMT1-211ENST00000544496 CEP164Q9UPV0 1460 aa38.39■■■■□ 3.74
PCMT1-211ENST00000544496 EEA1Q15075 1411 aa38.36■■■■□ 3.73
PCMT1-211ENST00000544496 FAM9AQ8IZU1 332 aaPredicted RBP38.3■■■■□ 3.72
PCMT1-211ENST00000544496 SOGA1O94964 1423 aa38.23■■■■□ 3.71
PCMT1-211ENST00000544496 DNMBPQ6XZF7 1577 aa38.22■■■■□ 3.71
PCMT1-211ENST00000544496 KIF21AQ7Z4S6 1674 aa38.15■■■■□ 3.7
PCMT1-211ENST00000544496 TOPBP1Q92547 1522 aa38.13■■■■□ 3.69
PCMT1-211ENST00000544496 LOC105371045A0A1W2PR82 267 aa38.09■■■■□ 3.69
PCMT1-211ENST00000544496 FGD5Q6ZNL6 1462 aa38.08■■■■□ 3.69
PCMT1-211ENST00000544496 CSRNP3Q8WYN3 585 aa38.06■■■■□ 3.68
PCMT1-211ENST00000544496 URB2Q14146 1524 aaKnown RBP38.05■■■■□ 3.68
PCMT1-211ENST00000544496 RUSC2Q8N2Y8 1516 aa38.03■■■■□ 3.68
PCMT1-211ENST00000544496 MRC2Q9UBG0 1479 aa37.97■■■■□ 3.67
PCMT1-211ENST00000544496 KIF27Q86VH2 1401 aa37.96■■■■□ 3.67
PCMT1-211ENST00000544496 POLA1P09884 1462 aaPredicted RBP37.93■■■■□ 3.66
PCMT1-211ENST00000544496 ERCC6Q03468 1493 aa37.91■■■■□ 3.66
PCMT1-211ENST00000544496 CUX2O14529 1486 aa37.81■■■■□ 3.64
PCMT1-211ENST00000544496 ABCA10Q8WWZ4 1543 aa37.8■■■■□ 3.64
PCMT1-211ENST00000544496 WDR62O43379 1518 aa37.77■■■■□ 3.64
PCMT1-211ENST00000544496 KIF21BO75037 1637 aa37.75■■■■□ 3.63
PCMT1-211ENST00000544496 RAD54L2Q9Y4B4 1467 aa37.74■■■■□ 3.63
PCMT1-211ENST00000544496 GOLGA3Q08378 1498 aa37.72■■■■□ 3.63
PCMT1-211ENST00000544496 EHMT2Q96KQ7 1210 aa37.66■■■■□ 3.62
PCMT1-211ENST00000544496 THOC2Q8NI27 1593 aaKnown RBP37.61■■■■□ 3.61
PCMT1-211ENST00000544496 WDR97A6NE52 1622 aa37.6■■■■□ 3.61
PCMT1-211ENST00000544496 PRXQ9BXM0 1461 aa37.6■■■■□ 3.61
PCMT1-211ENST00000544496 TNIKQ9UKE5 1360 aa37.58■■■■□ 3.61
PCMT1-211ENST00000544496 IGF1RP08069 1367 aa37.57■■■■□ 3.61
PCMT1-211ENST00000544496 ERICH3Q5RHP9 1530 aa37.57■■■■□ 3.6
PCMT1-211ENST00000544496 TARBP1Q13395 1621 aaKnown RBP37.55■■■■□ 3.6
PCMT1-211ENST00000544496 UBTFP17480 764 aaKnown RBP37.54■■■■□ 3.6
PCMT1-211ENST00000544496 IFT140Q96RY7 1462 aa37.52■■■■□ 3.6
PCMT1-211ENST00000544496 RAPGEF2Q9Y4G8 1499 aa37.48■■■■□ 3.59
PCMT1-211ENST00000544496 ABCA5Q8WWZ7 1642 aa37.45■■■■□ 3.59
PCMT1-211ENST00000544496 GAPVD1Q14C86 1478 aa37.42■■■■□ 3.58
PCMT1-211ENST00000544496 TDRD9Q8NDG6 1382 aaKnown RBP37.42■■■■□ 3.58
PCMT1-211ENST00000544496 CARMIL1Q5VZK9 1371 aa37.41■■■■□ 3.58
PCMT1-211ENST00000544496 CUL7Q14999 1698 aa37.35■■■■□ 3.57
PCMT1-211ENST00000544496 CEP162Q5TB80 1403 aa37.29■■■■□ 3.56
PCMT1-211ENST00000544496 AQRO60306 1485 aaKnown RBP eCLIP37.2■■■■□ 3.557e-7■■■□□ 17.5
PCMT1-211ENST00000544496 GRIN2BQ13224 1484 aa37.19■■■■□ 3.54
PCMT1-211ENST00000544496 ZNF608Q9ULD9 1512 aaPredicted RBP37.16■■■■□ 3.54
PCMT1-211ENST00000544496 PBRM1Q86U86 1689 aa37.15■■■■□ 3.54
PCMT1-211ENST00000544496 CLIP1P30622 1438 aa37.08■■■■□ 3.53
PCMT1-211ENST00000544496 EIF4G3O43432 1585 aaKnown RBP37.07■■■■□ 3.53
PCMT1-211ENST00000544496 FHAD1B1AJZ9 1412 aa37.06■■■■□ 3.52
PCMT1-211ENST00000544496 ADAMTS12P58397 1594 aa36.98■■■■□ 3.51
PCMT1-211ENST00000544496 MAGI1Q96QZ7 1491 aaPredicted RBP36.92■■■■□ 3.5
PCMT1-211ENST00000544496 SNAPC4Q5SXM2 1469 aa36.88■■■■□ 3.49
PCMT1-211ENST00000544496 CTTNBP2Q8WZ74 1663 aa36.84■■■■□ 3.49
PCMT1-211ENST00000544496 RANGAP1P46060 587 aaPredicted RBP36.82■■■■□ 3.49
PCMT1-211ENST00000544496 SYNJ2O15056 1496 aa36.75■■■■□ 3.47
PCMT1-211ENST00000544496 VPS8Q8N3P4 1428 aa36.74■■■■□ 3.47
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms