RNA–Protein interactions for RNA: ENST00000356942.9

GPM6B-203, Transcript of glycoprotein M6B, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GPM6B, Length 1,830 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPM6B-203ENST00000356942 NISCHQ9Y2I1 1504 aa30.13■■■□□ 2.41
GPM6B-203ENST00000356942 CCDC180Q9P1Z9 1646 aa26.59■■□□□ 1.85
GPM6B-203ENST00000356942 ABCC9O60706 1549 aa25.3■■□□□ 1.64
GPM6B-203ENST00000356942 ZCCHC6Q5VYS8 1495 aaKnown RBP25.26■■□□□ 1.63
GPM6B-203ENST00000356942 DCAF1Q9Y4B6 1507 aa24.99■■□□□ 1.59
GPM6B-203ENST00000356942 MYO15BQ96JP2 1530 aa24.87■■□□□ 1.57
GPM6B-203ENST00000356942 NACADO15069 1562 aa24.81■■□□□ 1.56
GPM6B-203ENST00000356942 DCAF8L2P0C7V8 631 aa24.77■■□□□ 1.56
GPM6B-203ENST00000356942 RB1CC1Q8TDY2 1594 aa24.68■■□□□ 1.54
GPM6B-203ENST00000356942 SCRIBQ14160 1630 aa24.26■■□□□ 1.47
GPM6B-203ENST00000356942 UNC13AQ9UPW8 1703 aa24.17■■□□□ 1.46
GPM6B-203ENST00000356942 SHROOM4Q9ULL8 1493 aa24.1■■□□□ 1.45
GPM6B-203ENST00000356942 BICRAQ9NZM4 1560 aa23.89■■□□□ 1.42
GPM6B-203ENST00000356942 PABPN1Q86U42 306 aaKnown RBP eCLIP23.68■■□□□ 1.38
GPM6B-203ENST00000356942 CECR2Q9BXF3 1484 aa23.36■■□□□ 1.33
GPM6B-203ENST00000356942 BAZ1AQ9NRL2 1556 aaPredicted RBP23.33■■□□□ 1.33
GPM6B-203ENST00000356942 SMARCA4P51532 1647 aa23.27■■□□□ 1.32
GPM6B-203ENST00000356942 EIF4G1Q04637 1599 aaKnown RBP23.22■■□□□ 1.31
GPM6B-203ENST00000356942 MROH2BQ7Z745 1585 aa23.22■■□□□ 1.31
GPM6B-203ENST00000356942 RSF1Q96T23 1441 aaPredicted RBP23.16■■□□□ 1.3
GPM6B-203ENST00000356942 PEG3Q9GZU2 1588 aa23.05■■□□□ 1.28
GPM6B-203ENST00000356942 WIZO95785 1651 aa23.02■■□□□ 1.28
GPM6B-203ENST00000356942 SMARCA2P51531 1590 aa22.99■■□□□ 1.27
GPM6B-203ENST00000356942 SUPT5HO00267 1087 aaKnown RBP22.96■■□□□ 1.27
GPM6B-203ENST00000356942 CC2D2AQ9P2K1 1620 aa22.96■■□□□ 1.27
GPM6B-203ENST00000356942 ATAD2BQ9ULI0 1458 aa22.95■■□□□ 1.26
GPM6B-203ENST00000356942 HMGXB3Q12766 1538 aa22.84■■□□□ 1.25
GPM6B-203ENST00000356942 NCAPD3P42695 1498 aa22.83■■□□□ 1.25
GPM6B-203ENST00000356942 TOP2AP11388 1531 aaKnown RBP22.83■■□□□ 1.25
GPM6B-203ENST00000356942 BAZ1BQ9UIG0 1483 aaKnown RBP22.8■■□□□ 1.24
GPM6B-203ENST00000356942 DNAJC5BQ9UF47 199 aa22.57■■□□□ 1.2
GPM6B-203ENST00000356942 CCDC88BA6NC98 1476 aa22.51■■□□□ 1.19
GPM6B-203ENST00000356942 CFTRP13569 1480 aa22.22■■□□□ 1.15
GPM6B-203ENST00000356942 PRDM2Q13029 1718 aa22.21■■□□□ 1.15
GPM6B-203ENST00000356942 CADPSQ9ULU8 1353 aa22.19■■□□□ 1.14
GPM6B-203ENST00000356942 LAMC3Q9Y6N6 1575 aa22.18■■□□□ 1.14
GPM6B-203ENST00000356942 NESP48681 1621 aa22.08■■□□□ 1.13
GPM6B-203ENST00000356942 PDS5BQ9NTI5 1447 aa21.97■■□□□ 1.11
GPM6B-203ENST00000356942 FANCD2Q9BXW9 1451 aa21.96■■□□□ 1.11
GPM6B-203ENST00000356942 KIF21AQ7Z4S6 1674 aa21.91■■□□□ 1.1
GPM6B-203ENST00000356942 CEP164Q9UPV0 1460 aa21.89■■□□□ 1.1
GPM6B-203ENST00000356942 ABCC8Q09428 1581 aa21.89■■□□□ 1.09
GPM6B-203ENST00000356942 WRNQ14191 1432 aaPredicted RBP eCLIP21.83■■□□□ 1.09
GPM6B-203ENST00000356942 CHIC1Q5VXU3 224 aa21.81■■□□□ 1.08
GPM6B-203ENST00000356942 ERCC6Q03468 1493 aa21.78■■□□□ 1.08
GPM6B-203ENST00000356942 BIVM-ERCC5R4GMW8 1640 aa21.78■■□□□ 1.08
GPM6B-203ENST00000356942 SYNJ1O43426 1573 aa21.77■■□□□ 1.08
GPM6B-203ENST00000356942 TOP2BQ02880 1626 aa21.76■■□□□ 1.07
GPM6B-203ENST00000356942 CUX1P39880 1505 aa21.76■■□□□ 1.07
GPM6B-203ENST00000356942 DNMBPQ6XZF7 1577 aa21.75■■□□□ 1.07
GPM6B-203ENST00000356942 MRC2Q9UBG0 1479 aa21.73■■□□□ 1.07
GPM6B-203ENST00000356942 URB2Q14146 1524 aaKnown RBP21.7■■□□□ 1.06
GPM6B-203ENST00000356942 THOC2Q8NI27 1593 aaKnown RBP21.69■■□□□ 1.06
GPM6B-203ENST00000356942 TOPBP1Q92547 1522 aa21.69■■□□□ 1.06
GPM6B-203ENST00000356942 TRIM41Q8WV44 630 aa21.68■■□□□ 1.06
GPM6B-203ENST00000356942 WDR62O43379 1518 aa21.66■■□□□ 1.06
GPM6B-203ENST00000356942 FGD5Q6ZNL6 1462 aa21.58■■□□□ 1.04
GPM6B-203ENST00000356942 POLA1P09884 1462 aaPredicted RBP21.54■■□□□ 1.04
GPM6B-203ENST00000356942 WDR97A6NE52 1622 aa21.45■■□□□ 1.02
GPM6B-203ENST00000356942 SOGA1O94964 1423 aa21.43■■□□□ 1.02
GPM6B-203ENST00000356942 TARBP1Q13395 1621 aaKnown RBP21.43■■□□□ 1.02
GPM6B-203ENST00000356942 CUX2O14529 1486 aa21.43■■□□□ 1.02
GPM6B-203ENST00000356942 ABCA10Q8WWZ4 1543 aa21.41■■□□□ 1.02
GPM6B-203ENST00000356942 RAD54L2Q9Y4B4 1467 aa21.4■■□□□ 1.02
GPM6B-203ENST00000356942 IFT140Q96RY7 1462 aa21.4■■□□□ 1.02
GPM6B-203ENST00000356942 EEA1Q15075 1411 aa21.37■■□□□ 1.01
GPM6B-203ENST00000356942 KIF27Q86VH2 1401 aa21.33■■□□□ 1
GPM6B-203ENST00000356942 ABCA5Q8WWZ7 1642 aa21.31■■□□□ 1
GPM6B-203ENST00000356942 RUSC2Q8N2Y8 1516 aa21.29■■□□□ 1
GPM6B-203ENST00000356942 EIF4G3O43432 1585 aaKnown RBP21.23■□□□□ 0.99
GPM6B-203ENST00000356942 GAPVD1Q14C86 1478 aa21.22■□□□□ 0.99
GPM6B-203ENST00000356942 ZNF608Q9ULD9 1512 aaPredicted RBP21.21■□□□□ 0.99
GPM6B-203ENST00000356942 PBRM1Q86U86 1689 aa21.21■□□□□ 0.99
GPM6B-203ENST00000356942 TDRD9Q8NDG6 1382 aaKnown RBP21.2■□□□□ 0.98
GPM6B-203ENST00000356942 FAM9AQ8IZU1 332 aaPredicted RBP21.19■□□□□ 0.98
GPM6B-203ENST00000356942 ERICH3Q5RHP9 1530 aa21.18■□□□□ 0.98
GPM6B-203ENST00000356942 AQRO60306 1485 aaKnown RBP eCLIP21.15■□□□□ 0.98
GPM6B-203ENST00000356942 CSRNP3Q8WYN3 585 aa21.15■□□□□ 0.98
GPM6B-203ENST00000356942 CUL7Q14999 1698 aa21.15■□□□□ 0.98
GPM6B-203ENST00000356942 GRIN2BQ13224 1484 aa21.14■□□□□ 0.97
GPM6B-203ENST00000356942 KIF21BO75037 1637 aa21.13■□□□□ 0.97
GPM6B-203ENST00000356942 IGF1RP08069 1367 aa21.12■□□□□ 0.97
GPM6B-203ENST00000356942 PRXQ9BXM0 1461 aa21.08■□□□□ 0.97
GPM6B-203ENST00000356942 ADAMTS12P58397 1594 aa21.06■□□□□ 0.96
GPM6B-203ENST00000356942 MAGI1Q96QZ7 1491 aaPredicted RBP21.04■□□□□ 0.96
GPM6B-203ENST00000356942 SNAPC4Q5SXM2 1469 aa21.03■□□□□ 0.96
GPM6B-203ENST00000356942 GOLGA3Q08378 1498 aa21.02■□□□□ 0.96
GPM6B-203ENST00000356942 CARMIL1Q5VZK9 1371 aa21.02■□□□□ 0.96
GPM6B-203ENST00000356942 RAPGEF2Q9Y4G8 1499 aa21■□□□□ 0.95
GPM6B-203ENST00000356942 FHAD1B1AJZ9 1412 aa21■□□□□ 0.95
GPM6B-203ENST00000356942 SYNJ2O15056 1496 aa20.93■□□□□ 0.94
GPM6B-203ENST00000356942 LOC105371045A0A1W2PR82 267 aa20.88■□□□□ 0.93
GPM6B-203ENST00000356942 GRIN2AQ12879 1464 aa20.87■□□□□ 0.93
GPM6B-203ENST00000356942 CTTNBP2Q8WZ74 1663 aa20.85■□□□□ 0.93
GPM6B-203ENST00000356942 CHD1O14646 1710 aa20.85■□□□□ 0.93
GPM6B-203ENST00000356942 EHMT2Q96KQ7 1210 aa20.84■□□□□ 0.93
GPM6B-203ENST00000356942 TNIKQ9UKE5 1360 aa20.83■□□□□ 0.93
GPM6B-203ENST00000356942 UBTFP17480 764 aaKnown RBP20.81■□□□□ 0.92
GPM6B-203ENST00000356942 CHMP7Q8WUX9 453 aaPredicted RBP20.8■□□□□ 0.92
GPM6B-203ENST00000356942 CEP170Q5SW79 1584 aa20.76■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms