RNA–Protein interactions for RNA: ENST00000431632.5

CSNK1E-209, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 763 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-209ENST00000431632 NISCHQ9Y2I1 1504 aa34.56■■■■□ 3.12
CSNK1E-209ENST00000431632 CCDC180Q9P1Z9 1646 aa30.59■■■□□ 2.49
CSNK1E-209ENST00000431632 ABCC9O60706 1549 aa30.05■■■□□ 2.4
CSNK1E-209ENST00000431632 DCAF8L2P0C7V8 631 aa29.02■■■□□ 2.24
CSNK1E-209ENST00000431632 RB1CC1Q8TDY2 1594 aa28.84■■■□□ 2.21
CSNK1E-209ENST00000431632 NACADO15069 1562 aa28.82■■■□□ 2.2
CSNK1E-209ENST00000431632 ZCCHC6Q5VYS8 1495 aaKnown RBP28.76■■■□□ 2.19
CSNK1E-209ENST00000431632 MYO15BQ96JP2 1530 aa28.64■■■□□ 2.18
CSNK1E-209ENST00000431632 DCAF1Q9Y4B6 1507 aa28.55■■■□□ 2.16
CSNK1E-209ENST00000431632 PABPN1Q86U42 306 aaKnown RBP eCLIP28.18■■■□□ 2.1
CSNK1E-209ENST00000431632 UNC13AQ9UPW8 1703 aa28.14■■■□□ 2.1
CSNK1E-209ENST00000431632 BICRAQ9NZM4 1560 aa28■■■□□ 2.07
CSNK1E-209ENST00000431632 SCRIBQ14160 1630 aa28■■■□□ 2.07
CSNK1E-209ENST00000431632 DNAJC5BQ9UF47 199 aa27.67■■■□□ 2.02
CSNK1E-209ENST00000431632 SHROOM4Q9ULL8 1493 aa27.63■■■□□ 2.01
CSNK1E-209ENST00000431632 EIF4G1Q04637 1599 aaKnown RBP27.24■■□□□ 1.95
CSNK1E-209ENST00000431632 CC2D2AQ9P2K1 1620 aa27.13■■□□□ 1.93
CSNK1E-209ENST00000431632 CECR2Q9BXF3 1484 aa26.98■■□□□ 1.91
CSNK1E-209ENST00000431632 SMARCA4P51532 1647 aa26.76■■□□□ 1.87
CSNK1E-209ENST00000431632 BAZ1AQ9NRL2 1556 aaPredicted RBP26.74■■□□□ 1.87
CSNK1E-209ENST00000431632 ATAD2BQ9ULI0 1458 aa26.67■■□□□ 1.86
CSNK1E-209ENST00000431632 MROH2BQ7Z745 1585 aa26.66■■□□□ 1.86
CSNK1E-209ENST00000431632 NCAPD3P42695 1498 aa26.65■■□□□ 1.86
CSNK1E-209ENST00000431632 SMARCA2P51531 1590 aa26.58■■□□□ 1.85
CSNK1E-209ENST00000431632 PEG3Q9GZU2 1588 aa26.49■■□□□ 1.83
CSNK1E-209ENST00000431632 HMGXB3Q12766 1538 aa26.44■■□□□ 1.82
CSNK1E-209ENST00000431632 BAZ1BQ9UIG0 1483 aaKnown RBP26.42■■□□□ 1.82
CSNK1E-209ENST00000431632 RSF1Q96T23 1441 aaPredicted RBP26.39■■□□□ 1.82
CSNK1E-209ENST00000431632 WIZO95785 1651 aa26.34■■□□□ 1.81
CSNK1E-209ENST00000431632 TOP2AP11388 1531 aaKnown RBP26.03■■□□□ 1.76
CSNK1E-209ENST00000431632 NESP48681 1621 aa26.03■■□□□ 1.76
CSNK1E-209ENST00000431632 CADPSQ9ULU8 1353 aa25.91■■□□□ 1.74
CSNK1E-209ENST00000431632 LAMC3Q9Y6N6 1575 aa25.87■■□□□ 1.73
CSNK1E-209ENST00000431632 ERCC6Q03468 1493 aa25.87■■□□□ 1.73
CSNK1E-209ENST00000431632 SUPT5HO00267 1087 aaKnown RBP25.85■■□□□ 1.73
CSNK1E-209ENST00000431632 CCDC88BA6NC98 1476 aa25.81■■□□□ 1.72
CSNK1E-209ENST00000431632 PDS5BQ9NTI5 1447 aa25.77■■□□□ 1.72
CSNK1E-209ENST00000431632 CFTRP13569 1480 aa25.72■■□□□ 1.71
CSNK1E-209ENST00000431632 KIF21AQ7Z4S6 1674 aa25.62■■□□□ 1.69
CSNK1E-209ENST00000431632 FANCD2Q9BXW9 1451 aa25.57■■□□□ 1.68
CSNK1E-209ENST00000431632 CUX2O14529 1486 aa25.54■■□□□ 1.68
CSNK1E-209ENST00000431632 THOC2Q8NI27 1593 aaKnown RBP25.52■■□□□ 1.68
CSNK1E-209ENST00000431632 CEP164Q9UPV0 1460 aa25.5■■□□□ 1.67
CSNK1E-209ENST00000431632 MRC2Q9UBG0 1479 aa25.47■■□□□ 1.67
CSNK1E-209ENST00000431632 PRDM2Q13029 1718 aa25.37■■□□□ 1.65
CSNK1E-209ENST00000431632 DNAJC5Q9H3Z4 198 aa25.36■■□□□ 1.65
CSNK1E-209ENST00000431632 WDR62O43379 1518 aa25.35■■□□□ 1.65
CSNK1E-209ENST00000431632 URB2Q14146 1524 aaKnown RBP25.32■■□□□ 1.64
CSNK1E-209ENST00000431632 TOPBP1Q92547 1522 aa25.16■■□□□ 1.62
CSNK1E-209ENST00000431632 ABCC8Q09428 1581 aa25.14■■□□□ 1.62
CSNK1E-209ENST00000431632 DNMBPQ6XZF7 1577 aa25.1■■□□□ 1.61
CSNK1E-209ENST00000431632 CUX1P39880 1505 aa24.99■■□□□ 1.59
CSNK1E-209ENST00000431632 IFT140Q96RY7 1462 aa24.98■■□□□ 1.59
CSNK1E-209ENST00000431632 POLA1P09884 1462 aaPredicted RBP24.95■■□□□ 1.58
CSNK1E-209ENST00000431632 ZNF608Q9ULD9 1512 aaPredicted RBP24.91■■□□□ 1.58
CSNK1E-209ENST00000431632 SOGA1O94964 1423 aa24.9■■□□□ 1.58
CSNK1E-209ENST00000431632 FGD5Q6ZNL6 1462 aa24.89■■□□□ 1.58
CSNK1E-209ENST00000431632 RAD54L2Q9Y4B4 1467 aa24.89■■□□□ 1.58
CSNK1E-209ENST00000431632 TARBP1Q13395 1621 aaKnown RBP24.86■■□□□ 1.57
CSNK1E-209ENST00000431632 WRNQ14191 1432 aaPredicted RBP eCLIP24.86■■□□□ 1.57
CSNK1E-209ENST00000431632 AQRO60306 1485 aaKnown RBP eCLIP24.8■■□□□ 1.563e-8■■■■□ 25.6
CSNK1E-209ENST00000431632 TDRD9Q8NDG6 1382 aaKnown RBP24.79■■□□□ 1.56
CSNK1E-209ENST00000431632 SYNJ1O43426 1573 aa24.76■■□□□ 1.55
CSNK1E-209ENST00000431632 TOP2BQ02880 1626 aa24.75■■□□□ 1.55
CSNK1E-209ENST00000431632 EIF4G3O43432 1585 aaKnown RBP24.72■■□□□ 1.55
CSNK1E-209ENST00000431632 BIVM-ERCC5R4GMW8 1640 aa24.71■■□□□ 1.55
CSNK1E-209ENST00000431632 ABCA10Q8WWZ4 1543 aa24.65■■□□□ 1.54
CSNK1E-209ENST00000431632 OSCARQ8IYS5 282 aa24.62■■□□□ 1.53
CSNK1E-209ENST00000431632 WDR97A6NE52 1622 aa24.59■■□□□ 1.53
CSNK1E-209ENST00000431632 GAPVD1Q14C86 1478 aa24.58■■□□□ 1.52
CSNK1E-209ENST00000431632 GRIN2BQ13224 1484 aa24.56■■□□□ 1.52
CSNK1E-209ENST00000431632 FBLN2P98095 1184 aa24.55■■□□□ 1.52
CSNK1E-209ENST00000431632 SNAPC4Q5SXM2 1469 aa24.51■■□□□ 1.51
CSNK1E-209ENST00000431632 ABCA5Q8WWZ7 1642 aa24.49■■□□□ 1.51
CSNK1E-209ENST00000431632 CHMP7Q8WUX9 453 aaPredicted RBP24.47■■□□□ 1.51
CSNK1E-209ENST00000431632 MAGI1Q96QZ7 1491 aaPredicted RBP24.45■■□□□ 1.51
CSNK1E-209ENST00000431632 PBRM1Q86U86 1689 aa24.42■■□□□ 1.5
CSNK1E-209ENST00000431632 CHD1O14646 1710 aa24.4■■□□□ 1.5
CSNK1E-209ENST00000431632 SYNJ2O15056 1496 aa24.38■■□□□ 1.49
CSNK1E-209ENST00000431632 TRIM41Q8WV44 630 aa24.38■■□□□ 1.49
CSNK1E-209ENST00000431632 ERICH3Q5RHP9 1530 aa24.33■■□□□ 1.49
CSNK1E-209ENST00000431632 KIF27Q86VH2 1401 aa24.33■■□□□ 1.49
CSNK1E-209ENST00000431632 IGF1RP08069 1367 aa24.3■■□□□ 1.48
CSNK1E-209ENST00000431632 FHAD1B1AJZ9 1412 aa24.29■■□□□ 1.48
CSNK1E-209ENST00000431632 ADAMTS12P58397 1594 aa24.25■■□□□ 1.47
CSNK1E-209ENST00000431632 GRIN2AQ12879 1464 aa24.23■■□□□ 1.47
CSNK1E-209ENST00000431632 RUSC2Q8N2Y8 1516 aa24.19■■□□□ 1.46
CSNK1E-209ENST00000431632 CLASP1Q7Z460 1538 aa24.16■■□□□ 1.46
CSNK1E-209ENST00000431632 CHIC1Q5VXU3 224 aa24.14■■□□□ 1.45
CSNK1E-209ENST00000431632 CARMIL1Q5VZK9 1371 aa24.13■■□□□ 1.45
CSNK1E-209ENST00000431632 NUP160Q12769 1436 aa24.12■■□□□ 1.45
CSNK1E-209ENST00000431632 ARHGEF11O15085 1522 aa24.12■■□□□ 1.45
CSNK1E-209ENST00000431632 RIMBP3CA6NJZ7 1639 aa24.1■■□□□ 1.45
CSNK1E-209ENST00000431632 RIMBP3BA6NNM3 1639 aa24.1■■□□□ 1.45
CSNK1E-209ENST00000431632 RIMBP3Q9UFD9 1639 aa24.1■■□□□ 1.45
CSNK1E-209ENST00000431632 CEP170Q5SW79 1584 aa24.09■■□□□ 1.45
CSNK1E-209ENST00000431632 CUL7Q14999 1698 aa24.07■■□□□ 1.44
CSNK1E-209ENST00000431632 CYB5RLQ6IPT4 315 aa24.02■■□□□ 1.44
CSNK1E-209ENST00000431632 JPH4Q96JJ6 628 aa23.99■■□□□ 1.43
CSNK1E-209ENST00000431632 CSRNP3Q8WYN3 585 aa23.95■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms