RNA–Protein interactions for RNA: ENST00000367378.5

PCMT1-201, Transcript of protein-L-isoaspartate (D-aspartate) O-methyltransferase, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCMT1, Length 1,293 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCMT1-201ENST00000367378 NISCHQ9Y2I1 1504 aa54.71■■■■■ 6.35
PCMT1-201ENST00000367378 ABCC9O60706 1549 aa49.68■■■■■ 5.54
PCMT1-201ENST00000367378 CCDC180Q9P1Z9 1646 aa49.27■■■■■ 5.48
PCMT1-201ENST00000367378 RB1CC1Q8TDY2 1594 aa47.07■■■■■ 5.13
PCMT1-201ENST00000367378 DNAJC5BQ9UF47 199 aa47■■■■■ 5.11
PCMT1-201ENST00000367378 NACADO15069 1562 aa46.64■■■■■ 5.06
PCMT1-201ENST00000367378 DCAF8L2P0C7V8 631 aa46.35■■■■■ 5.01
PCMT1-201ENST00000367378 PABPN1Q86U42 306 aaKnown RBP eCLIP46.19■■■■■ 4.98
PCMT1-201ENST00000367378 UNC13AQ9UPW8 1703 aa46.12■■■■■ 4.97
PCMT1-201ENST00000367378 MYO15BQ96JP2 1530 aa45.85■■■■■ 4.93
PCMT1-201ENST00000367378 BICRAQ9NZM4 1560 aa45.79■■■■■ 4.92
PCMT1-201ENST00000367378 ZCCHC6Q5VYS8 1495 aaKnown RBP45.25■■■■■ 4.83
PCMT1-201ENST00000367378 DCAF1Q9Y4B6 1507 aa45.13■■■■■ 4.82
PCMT1-201ENST00000367378 SHROOM4Q9ULL8 1493 aa45.01■■■■■ 4.8
PCMT1-201ENST00000367378 SCRIBQ14160 1630 aa44.9■■■■■ 4.78
PCMT1-201ENST00000367378 CC2D2AQ9P2K1 1620 aa44.86■■■■■ 4.77
PCMT1-201ENST00000367378 CECR2Q9BXF3 1484 aa44.77■■■■■ 4.76
PCMT1-201ENST00000367378 EIF4G1Q04637 1599 aaKnown RBP44.65■■■■■ 4.74
PCMT1-201ENST00000367378 DNAJC5Q9H3Z4 198 aa43.39■■■■■ 4.54
PCMT1-201ENST00000367378 NCAPD3P42695 1498 aa43.07■■■■■ 4.49
PCMT1-201ENST00000367378 CUX2O14529 1486 aa42.92■■■■■ 4.46
PCMT1-201ENST00000367378 ATAD2BQ9ULI0 1458 aa42.91■■■■■ 4.46
PCMT1-201ENST00000367378 ERCC6Q03468 1493 aa42.87■■■■■ 4.45
PCMT1-201ENST00000367378 SMARCA4P51532 1647 aa42.78■■■■■ 4.44
PCMT1-201ENST00000367378 SMARCA2P51531 1590 aa42.73■■■■■ 4.43
PCMT1-201ENST00000367378 HMGXB3Q12766 1538 aa42.71■■■■■ 4.43
PCMT1-201ENST00000367378 NESP48681 1621 aa42.59■■■■■ 4.41
PCMT1-201ENST00000367378 BAZ1AQ9NRL2 1556 aaPredicted RBP42.48■■■■■ 4.39
PCMT1-201ENST00000367378 BAZ1BQ9UIG0 1483 aaKnown RBP42.45■■■■■ 4.39
PCMT1-201ENST00000367378 PEG3Q9GZU2 1588 aa42.35■■■■■ 4.37
PCMT1-201ENST00000367378 THOC2Q8NI27 1593 aaKnown RBP42.22■■■■■ 4.35
PCMT1-201ENST00000367378 MROH2BQ7Z745 1585 aa42.18■■■■■ 4.34
PCMT1-201ENST00000367378 LAMC3Q9Y6N6 1575 aa42.17■■■■■ 4.34
PCMT1-201ENST00000367378 KIF21AQ7Z4S6 1674 aa42.05■■■■■ 4.32
PCMT1-201ENST00000367378 PDS5BQ9NTI5 1447 aa41.91■■■■■ 4.3
PCMT1-201ENST00000367378 CADPSQ9ULU8 1353 aa41.75■■■■■ 4.27
PCMT1-201ENST00000367378 WIZO95785 1651 aa41.69■■■■■ 4.26
PCMT1-201ENST00000367378 MRC2Q9UBG0 1479 aa41.6■■■■■ 4.25
PCMT1-201ENST00000367378 WDR62O43379 1518 aa41.52■■■■■ 4.24
PCMT1-201ENST00000367378 CEP164Q9UPV0 1460 aa41.34■■■■■ 4.21
PCMT1-201ENST00000367378 TRIM41Q8WV44 630 aa41.33■■■■■ 4.21
PCMT1-201ENST00000367378 FANCD2Q9BXW9 1451 aa41.28■■■■■ 4.2
PCMT1-201ENST00000367378 CFTRP13569 1480 aa41.19■■■■■ 4.18
PCMT1-201ENST00000367378 RSF1Q96T23 1441 aaPredicted RBP41.14■■■■■ 4.18
PCMT1-201ENST00000367378 TOP2AP11388 1531 aaKnown RBP41.07■■■■■ 4.16
PCMT1-201ENST00000367378 URB2Q14146 1524 aaKnown RBP41.01■■■■■ 4.16
PCMT1-201ENST00000367378 OSCARQ8IYS5 282 aa40.9■■■■■ 4.14
PCMT1-201ENST00000367378 PRDM2Q13029 1718 aa40.8■■■■■ 4.12
PCMT1-201ENST00000367378 CCDC88BA6NC98 1476 aa40.64■■■■■ 4.1
PCMT1-201ENST00000367378 ZNF608Q9ULD9 1512 aaPredicted RBP40.57■■■■■ 4.09
PCMT1-201ENST00000367378 IFT140Q96RY7 1462 aa40.53■■■■■ 4.08
PCMT1-201ENST00000367378 RIMBP3CA6NJZ7 1639 aa40.49■■■■■ 4.07
PCMT1-201ENST00000367378 RIMBP3BA6NNM3 1639 aa40.49■■■■■ 4.07
PCMT1-201ENST00000367378 RIMBP3Q9UFD9 1639 aa40.49■■■■■ 4.07
PCMT1-201ENST00000367378 TOPBP1Q92547 1522 aa40.47■■■■■ 4.07
PCMT1-201ENST00000367378 EIF4G3O43432 1585 aaKnown RBP40.32■■■■■ 4.05
PCMT1-201ENST00000367378 ABCC8Q09428 1581 aa40.3■■■■■ 4.04
PCMT1-201ENST00000367378 ARHGEF11O15085 1522 aa40.29■■■■■ 4.04
PCMT1-201ENST00000367378 DNMBPQ6XZF7 1577 aa40.28■■■■■ 4.04
PCMT1-201ENST00000367378 TARBP1Q13395 1621 aaKnown RBP40.17■■■■■ 4.02
PCMT1-201ENST00000367378 AQRO60306 1485 aaKnown RBP eCLIP40.13■■■■■ 4.027e-7■■■□□ 17.5
PCMT1-201ENST00000367378 CHD1O14646 1710 aa40.13■■■■■ 4.01
PCMT1-201ENST00000367378 POLA1P09884 1462 aaPredicted RBP40.03■■■■■ 4
PCMT1-201ENST00000367378 CYB5RLQ6IPT4 315 aa40■■■■□ 3.99
PCMT1-201ENST00000367378 FBLN2P98095 1184 aa39.92■■■■□ 3.98
PCMT1-201ENST00000367378 RAD54L2Q9Y4B4 1467 aa39.92■■■■□ 3.98
PCMT1-201ENST00000367378 ARAP1Q96P48 1450 aa39.88■■■■□ 3.97
PCMT1-201ENST00000367378 TDRD9Q8NDG6 1382 aaKnown RBP39.83■■■■□ 3.97
PCMT1-201ENST00000367378 SOGA1O94964 1423 aa39.82■■■■□ 3.97
PCMT1-201ENST00000367378 FGD5Q6ZNL6 1462 aa39.73■■■■□ 3.95
PCMT1-201ENST00000367378 SNAPC4Q5SXM2 1469 aa39.7■■■■□ 3.95
PCMT1-201ENST00000367378 TRHP20396 242 aaPredicted RBP39.67■■■■□ 3.94
PCMT1-201ENST00000367378 CUX1P39880 1505 aa39.65■■■■□ 3.94
PCMT1-201ENST00000367378 WDR97A6NE52 1622 aa39.65■■■■□ 3.94
PCMT1-201ENST00000367378 CLASP1Q7Z460 1538 aa39.62■■■■□ 3.93
PCMT1-201ENST00000367378 MAGI1Q96QZ7 1491 aaPredicted RBP39.55■■■■□ 3.92
PCMT1-201ENST00000367378 CHMP7Q8WUX9 453 aaPredicted RBP39.54■■■■□ 3.92
PCMT1-201ENST00000367378 SYNJ1O43426 1573 aa39.52■■■■□ 3.92
PCMT1-201ENST00000367378 GRIN2BQ13224 1484 aa39.51■■■■□ 3.92
PCMT1-201ENST00000367378 SYNJ2O15056 1496 aa39.43■■■■□ 3.9
PCMT1-201ENST00000367378 PBRM1Q86U86 1689 aa39.4■■■■□ 3.9
PCMT1-201ENST00000367378 GAPVD1Q14C86 1478 aa39.33■■■■□ 3.89
PCMT1-201ENST00000367378 ABCA5Q8WWZ7 1642 aa39.25■■■■□ 3.87
PCMT1-201ENST00000367378 ABCA10Q8WWZ4 1543 aa39.24■■■■□ 3.87
PCMT1-201ENST00000367378 SUPT5HO00267 1087 aaKnown RBP39.03■■■■□ 3.84
PCMT1-201ENST00000367378 ERCC6L2Q5T890 1561 aa39.03■■■■□ 3.84
PCMT1-201ENST00000367378 GRIN2AQ12879 1464 aa39.02■■■■□ 3.84
PCMT1-201ENST00000367378 WRNQ14191 1432 aaPredicted RBP eCLIP38.97■■■■□ 3.83
PCMT1-201ENST00000367378 ADAMTS12P58397 1594 aa38.97■■■■□ 3.83
PCMT1-201ENST00000367378 CEP170Q5SW79 1584 aa38.94■■■■□ 3.82
PCMT1-201ENST00000367378 BIVM-ERCC5R4GMW8 1640 aa38.91■■■■□ 3.82
PCMT1-201ENST00000367378 NUP160Q12769 1436 aa38.9■■■■□ 3.82
PCMT1-201ENST00000367378 TOP2BQ02880 1626 aa38.89■■■■□ 3.82
PCMT1-201ENST00000367378 SHROOM2Q13796 1616 aa38.81■■■■□ 3.8
PCMT1-201ENST00000367378 FHAD1B1AJZ9 1412 aa38.8■■■■□ 3.8
PCMT1-201ENST00000367378 AEBP2Q6ZN18 517 aaPredicted RBP38.77■■■■□ 3.8
PCMT1-201ENST00000367378 ERICH3Q5RHP9 1530 aa38.73■■■■□ 3.79
PCMT1-201ENST00000367378 PRG4Q92954 1404 aaPredicted RBP38.57■■■■□ 3.77
PCMT1-201ENST00000367378 KIF13AQ9H1H9 1805 aa38.55■■■■□ 3.76
PCMT1-201ENST00000367378 JPH4Q96JJ6 628 aa38.5■■■■□ 3.75
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms