Protein–RNA interactions for Protein: P23246

SFPQ, Splicing factor, proline- and glutamine-rich, humanhuman

Known RBP eCLIP

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFPQP23246 ELL2-203ENST00000506628 520 ntTSL 522.78■■□□□ 1.241e-7■■■□□ 17.6
SFPQP23246 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.961e-7■■■□□ 17.6
SFPQP23246 ELL2-208ENST00000635633 467 ntTSL 37.02□□□□□ -1.291e-7■■■□□ 17.6
SFPQP23246 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.545e-6■■■□□ 17.6
SFPQP23246 GNAQ-202ENST00000411677 551 ntTSL 311.23□□□□□ -0.615e-6■■■□□ 17.6
SFPQP23246 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC17.28■□□□□ 0.364e-6■■■□□ 17.6
SFPQP23246 NECAB3-212ENST00000485976 1016 ntTSL 525.16■■□□□ 1.624e-6■■■□□ 17.5
SFPQP23246 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC23.13■■□□□ 1.291e-6■■■□□ 17.5
SFPQP23246 ITPR2-201ENST00000242737 581 ntTSL 1 (best) BASIC12.26□□□□□ -0.451e-6■■■□□ 17.5
SFPQP23246 ITPR2-209ENST00000545235 540 ntTSL 1 (best)9.4□□□□□ -0.91e-6■■■□□ 17.5
SFPQP23246 RERE-204ENST00000400908 5790 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.171e-6■■■□□ 17.5
SFPQP23246 RERE-201ENST00000337907 8026 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.041e-6■■■□□ 17.5
SFPQP23246 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC28.07■■■□□ 2.082e-6■■■□□ 17.5
SFPQP23246 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC26.95■■□□□ 1.92e-6■■■□□ 17.5
SFPQP23246 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC25.55■■□□□ 1.682e-6■■■□□ 17.5
SFPQP23246 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC25.32■■□□□ 1.642e-6■■■□□ 17.5
SFPQP23246 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC24.18■■□□□ 1.462e-6■■■□□ 17.5
SFPQP23246 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC23.34■■□□□ 1.332e-6■■■□□ 17.5
SFPQP23246 PCSK6-203ENST00000557794 1196 ntTSL 512.45□□□□□ -0.422e-6■■■□□ 17.5
SFPQP23246 BRD4-208ENST00000597315 892 ntTSL 530.04■■■□□ 2.43e-7■■■□□ 17.5
SFPQP23246 BRD4-212ENST00000630599 726 ntTSL 2 BASIC28.06■■■□□ 2.083e-7■■■□□ 17.5
SFPQP23246 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC22.87■■□□□ 1.253e-7■■■□□ 17.5
SFPQP23246 BRD4-205ENST00000594841 1821 ntAPPRIS ALT2 TSL 1 (best)16.59■□□□□ 0.253e-7■■■□□ 17.5
SFPQP23246 BRD4-210ENST00000601941 604 ntTSL 513.7□□□□□ -0.223e-7■■■□□ 17.5
SFPQP23246 RYBP-201ENST00000477973 7215 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.931e-6■■■□□ 17.5
SFPQP23246 TBL1X-205ENST00000422314 496 ntTSL 226.53■■□□□ 1.843e-6■■■□□ 17.5
SFPQP23246 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC26.08■■□□□ 1.773e-6■■■□□ 17.5
SFPQP23246 TBL1X-202ENST00000380961 4674 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.13e-6■■■□□ 17.5
SFPQP23246 TBL1X-203ENST00000407597 5596 ntTSL 2 BASIC14.38□□□□□ -0.113e-6■■■□□ 17.5
SFPQP23246 TBL1X-206ENST00000424279 5451 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.153e-6■■■□□ 17.5
SFPQP23246 TBL1X-207ENST00000441088 520 ntTSL 37.45□□□□□ -1.223e-6■■■□□ 17.5
SFPQP23246 TBL1X-204ENST00000415293 565 ntTSL 57.45□□□□□ -1.223e-6■■■□□ 17.5
SFPQP23246 LZTS2-206ENST00000481129 745 ntTSL 315.73■□□□□ 0.116e-7■■■□□ 17.5
SFPQP23246 SND1-201ENST00000354725 3476 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.482e-6■■■□□ 17.4
SFPQP23246 PKM-203ENST00000389093 2279 ntTSL 5 BASIC28.01■■■□□ 2.077e-8■■■□□ 17.4
SFPQP23246 PKM-204ENST00000449901 2526 ntTSL 2 BASIC27.55■■■□□ 27e-8■■■□□ 17.4
SFPQP23246 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC25.49■■□□□ 1.677e-8■■■□□ 17.4
SFPQP23246 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC22.86■■□□□ 1.257e-8■■■□□ 17.4
SFPQP23246 PKM-217ENST00000566809 560 ntTSL 422.36■■□□□ 1.177e-8■■■□□ 17.4
SFPQP23246 PKM-218ENST00000567087 550 ntTSL 420.73■□□□□ 0.917e-8■■■□□ 17.4
SFPQP23246 PKM-223ENST00000569050 457 ntTSL 419.06■□□□□ 0.647e-8■■■□□ 17.4
SFPQP23246 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC19.03■□□□□ 0.647e-8■■■□□ 17.4
SFPQP23246 PKM-222ENST00000568883 1863 ntTSL 5 BASIC14.6□□□□□ -0.077e-8■■■□□ 17.4
SFPQP23246 PKM-202ENST00000335181 2318 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.147e-8■■■□□ 17.4
SFPQP23246 PKM-224ENST00000569857 1355 ntTSL 513.71□□□□□ -0.227e-8■■■□□ 17.4
SFPQP23246 PKM-219ENST00000567118 2254 ntTSL 212.72□□□□□ -0.377e-8■■■□□ 17.4
SFPQP23246 PKM-211ENST00000564276 753 ntTSL 1 (best)10.4□□□□□ -0.747e-8■■■□□ 17.4
SFPQP23246 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC19.67■□□□□ 0.742e-6■■■□□ 17.4
SFPQP23246 SMAD3-213ENST00000560175 542 ntTSL 414.71□□□□□ -0.052e-6■■■□□ 17.4
SFPQP23246 ZNF787-201ENST00000586787 386 ntTSL 1 (best)20.79■□□□□ 0.927e-7■■■□□ 17.4
SFPQP23246 MAFK-202ENST00000403150 2773 ntTSL 226.5■■□□□ 1.833e-7■■■□□ 17.4
SFPQP23246 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.953e-7■■■□□ 17.4
SFPQP23246 CSNK1G2-204ENST00000589350 780 ntTSL 519.04■□□□□ 0.643e-7■■■□□ 17.4
SFPQP23246 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC18.64■□□□□ 0.573e-7■■■□□ 17.4
SFPQP23246 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.563e-7■■■□□ 17.4
SFPQP23246 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.473e-7■■■□□ 17.4
SFPQP23246 SIK3-211ENST00000485363 764 ntTSL 1 (best)17.79■□□□□ 0.443e-7■■■□□ 17.4
SFPQP23246 CCDC57-207ENST00000419322 2829 ntAPPRIS ALT2 TSL 517.48■□□□□ 0.393e-7■■■□□ 17.4
SFPQP23246 CCDC57-202ENST00000389641 3000 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.113e-7■■■□□ 17.4
SFPQP23246 CCDC57-206ENST00000392347 3000 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.113e-7■■■□□ 17.4
SFPQP23246 CCDC57-204ENST00000392345 678 ntAPPRIS ALT2 TSL 315.51■□□□□ 0.073e-7■■■□□ 17.4
SFPQP23246 SIK3-204ENST00000445177 6331 ntAPPRIS ALT2 TSL 515.27■□□□□ 0.033e-7■■■□□ 17.4
SFPQP23246 CSNK1G2-210ENST00000614707 249 ntTSL 215.23■□□□□ 0.033e-7■■■□□ 17.4
SFPQP23246 CCDC57-218ENST00000583593 429 ntTSL 315.13■□□□□ 0.013e-7■■■□□ 17.4
SFPQP23246 CCDC57-205ENST00000392346 2964 ntAPPRIS ALT2 TSL 2 BASIC13.29□□□□□ -0.283e-7■■■□□ 17.4
SFPQP23246 SIK3-203ENST00000415541 3816 ntTSL 1 (best)8.99□□□□□ -0.973e-7■■■□□ 17.4
SFPQP23246 ZHX2-202ENST00000534247 873 ntTSL 35.18□□□□□ -1.581e-6■■■□□ 17.4
SFPQP23246 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC20.21■□□□□ 0.832e-8■■■□□ 17.4
SFPQP23246 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.782e-8■■■□□ 17.4
SFPQP23246 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.52e-8■■■□□ 17.4
SFPQP23246 ASXL1-201ENST00000306058 6591 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -02e-8■■■□□ 17.4
SFPQP23246 ASXL1-204ENST00000470145 1073 ntTSL 510.98□□□□□ -0.652e-8■■■□□ 17.4
SFPQP23246 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.013e-6■■■□□ 17.4
SFPQP23246 SLCO4A1-208ENST00000497209 3092 ntTSL 1 (best)17.55■□□□□ 0.43e-6■■■□□ 17.4
SFPQP23246 FARSB-201ENST00000281828 3369 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.033e-6■■■□□ 17.4
SFPQP23246 JMJD1C-211ENST00000633035 499 ntTSL 318.49■□□□□ 0.552e-6■■■□□ 17.4
SFPQP23246 AGAP1-203ENST00000402604 563 ntTSL 413.61□□□□□ -0.239e-7■■■□□ 17.3
SFPQP23246 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.844e-7■■■□□ 17.3
SFPQP23246 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC17.76■□□□□ 0.434e-7■■■□□ 17.3
SFPQP23246 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.873e-6■■■□□ 17.3
SFPQP23246 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.693e-6■■■□□ 17.3
SFPQP23246 AKT1-215ENST00000555926 553 ntTSL 321.82■■□□□ 1.083e-6■■■□□ 17.3
SFPQP23246 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.993e-6■■■□□ 17.3
SFPQP23246 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.643e-6■■■□□ 17.3
SFPQP23246 AKT1-208ENST00000554581 3916 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.123e-6■■■□□ 17.3
SFPQP23246 AKT1-202ENST00000402615 3913 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.343e-6■■■□□ 17.3
SFPQP23246 TTC3-223ENST00000492275 769 ntTSL 328.61■■■□□ 2.175e-8■■■□□ 17.3
SFPQP23246 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC27.04■■□□□ 1.925e-8■■■□□ 17.3
SFPQP23246 TTC3-212ENST00000463216 842 ntTSL 527■■□□□ 1.915e-8■■■□□ 17.3
SFPQP23246 TTC3-224ENST00000494243 861 ntTSL 526.78■■□□□ 1.885e-8■■■□□ 17.3
SFPQP23246 TTC3-217ENST00000481605 1540 ntTSL 526.29■■□□□ 1.85e-8■■■□□ 17.3
SFPQP23246 TTC3-210ENST00000450533 2451 ntTSL 1 (best)25.53■■□□□ 1.685e-8■■■□□ 17.3
SFPQP23246 TTC3-209ENST00000438055 3606 ntTSL 519.38■□□□□ 0.695e-8■■■□□ 17.3
SFPQP23246 TTC3-207ENST00000418766 3771 ntTSL 518.97■□□□□ 0.635e-8■■■□□ 17.3
SFPQP23246 TTC3-219ENST00000485402 3626 ntTSL 517.19■□□□□ 0.345e-8■■■□□ 17.3
SFPQP23246 TTC3-202ENST00000355666 7712 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.595e-8■■■□□ 17.3
SFPQP23246 RERE-213ENST00000480342 2710 ntTSL 211.53□□□□□ -0.568e-7■■■□□ 17.3
SFPQP23246 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.351e-6■■■□□ 17.2
SFPQP23246 ACTN4-210ENST00000588618 1729 ntTSL 1 (best)24.8■■□□□ 1.561e-6■■■□□ 17.2
SFPQP23246 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC20.5■□□□□ 0.871e-6■■■□□ 17.2
Retrieved 100 of 4,991 protein–RNA pairs in 88.5 ms