RNA–Protein interactions for RNA: ENST00000400908.6

RERE-204, Transcript of arginine-glutamic acid dipeptide repeats, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RERE, Length 5,790 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RERE-204ENST00000400908 NISCHQ9Y2I1 1504 aa23.58■■□□□ 1.36
RERE-204ENST00000400908 DCAF8L2P0C7V8 631 aa23.04■■□□□ 1.28
RERE-204ENST00000400908 PELP1Q8IZL8 1130 aaKnown RBP22.93■■□□□ 1.26
RERE-204ENST00000400908 ERICH6Q7L0X2 663 aa22.06■■□□□ 1.12
RERE-204ENST00000400908 SUPT5HO00267 1087 aaKnown RBP22■■□□□ 1.11
RERE-204ENST00000400908 SHROOM4Q9ULL8 1493 aa21.96■■□□□ 1.11
RERE-204ENST00000400908 CCER1Q8TC90 406 aaPredicted RBP21.85■■□□□ 1.09
RERE-204ENST00000400908 MYT1Q01538 1121 aa21.7■■□□□ 1.06
RERE-204ENST00000400908 CENPBP07199 599 aaPredicted RBP21.42■■□□□ 1.02
RERE-204ENST00000400908 APLP2Q06481 763 aa21.37■■□□□ 1.01
RERE-204ENST00000400908 EHMT2Q96KQ7 1210 aa21.36■■□□□ 1.01
RERE-204ENST00000400908 NEFLP07196 543 aa21.1■□□□□ 0.97
RERE-204ENST00000400908 FAM9AQ8IZU1 332 aaPredicted RBP20.97■□□□□ 0.95
RERE-204ENST00000400908 YTHDC1Q96MU7 727 aaKnown RBP20.91■□□□□ 0.94
RERE-204ENST00000400908 PCGF6Q9BYE7 350 aa20.86■□□□□ 0.93
RERE-204ENST00000400908 DAXXQ9UER7 740 aaPredicted RBP20.85■□□□□ 0.93
RERE-204ENST00000400908 ZEB1P37275 1124 aaPredicted RBP20.82■□□□□ 0.92
RERE-204ENST00000400908 TTBK1Q5TCY1 1321 aaPredicted RBP20.78■□□□□ 0.92
RERE-204ENST00000400908 TRIM41Q8WV44 630 aa20.43■□□□□ 0.86
RERE-204ENST00000400908 RTL5Q5HYW3 569 aaPredicted RBP20.39■□□□□ 0.85
RERE-204ENST00000400908 ATP1B4Q9UN42 357 aaPredicted RBP20.31■□□□□ 0.84
RERE-204ENST00000400908 RANGAP1P46060 587 aaPredicted RBP20.29■□□□□ 0.84
RERE-204ENST00000400908 ZNF316A6NFI3 1004 aaPredicted RBP20.27■□□□□ 0.84
RERE-204ENST00000400908 CLSPNQ9HAW4 1339 aa20.05■□□□□ 0.8
RERE-204ENST00000400908 ABCC9O60706 1549 aa20.01■□□□□ 0.79
RERE-204ENST00000400908 UBTFP17480 764 aaKnown RBP20.01■□□□□ 0.79
RERE-204ENST00000400908 POLR3GLQ9BT43 218 aa19.99■□□□□ 0.79
RERE-204ENST00000400908 CHIC1Q5VXU3 224 aa19.92■□□□□ 0.78
RERE-204ENST00000400908 LOC105371045A0A1W2PR82 267 aa19.76■□□□□ 0.75
RERE-204ENST00000400908 CNGB1Q14028 1251 aaPredicted RBP19.75■□□□□ 0.75
RERE-204ENST00000400908 PPARGC1BQ86YN6 1023 aaKnown RBP19.74■□□□□ 0.75
RERE-204ENST00000400908 HRCP23327 699 aa19.71■□□□□ 0.75
RERE-204ENST00000400908 MYT1LQ9UL68 1186 aa19.7■□□□□ 0.74
RERE-204ENST00000400908 PABPN1Q86U42 306 aaKnown RBP eCLIP19.69■□□□□ 0.74
RERE-204ENST00000400908 SLC4A1APQ9BWU0 796 aaKnown RBP19.66■□□□□ 0.74
RERE-204ENST00000400908 TRIM26Q12899 539 aaPredicted RBP19.62■□□□□ 0.73
RERE-204ENST00000400908 ZCCHC6Q5VYS8 1495 aaKnown RBP19.61■□□□□ 0.73
RERE-204ENST00000400908 GLIPR1L2Q4G1C9 344 aa19.6■□□□□ 0.73
RERE-204ENST00000400908 EIF5BO60841 1220 aaKnown RBP19.59■□□□□ 0.73
RERE-204ENST00000400908 ZBTB47Q9UFB7 747 aaPredicted RBP19.59■□□□□ 0.73
RERE-204ENST00000400908 CCDC180Q9P1Z9 1646 aa19.57■□□□□ 0.72
RERE-204ENST00000400908 ITGAEP38570 1179 aa19.53■□□□□ 0.72
RERE-204ENST00000400908 CDK11AQ9UQ88 783 aaPredicted RBP19.51■□□□□ 0.71
RERE-204ENST00000400908 BCANQ96GW7 911 aa19.42■□□□□ 0.7
RERE-204ENST00000400908 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.42■□□□□ 0.7
RERE-204ENST00000400908 HNRNPUL2Q1KMD3 747 aaKnown RBP19.42■□□□□ 0.7
RERE-204ENST00000400908 ANP32BQ92688 251 aaKnown RBP19.41■□□□□ 0.7
RERE-204ENST00000400908 SCRIBQ14160 1630 aa19.4■□□□□ 0.7
RERE-204ENST00000400908 DIEXFQ68CQ4 756 aaKnown RBP19.35■□□□□ 0.69
RERE-204ENST00000400908 ANP32AP39687 249 aaKnown RBP19.3■□□□□ 0.68
RERE-204ENST00000400908 CANXP27824 592 aaKnown RBP19.25■□□□□ 0.67
RERE-204ENST00000400908 GTF3C3Q9Y5Q9 886 aa19.24■□□□□ 0.67
RERE-204ENST00000400908 BCL11AQ9H165 835 aa19.23■□□□□ 0.67
RERE-204ENST00000400908 SLC24A1O60721 1099 aa19.13■□□□□ 0.65
RERE-204ENST00000400908 NPM2Q86SE8 214 aaKnown RBP19.11■□□□□ 0.65
RERE-204ENST00000400908 ANP32CO43423 234 aa19.11■□□□□ 0.65
RERE-204ENST00000400908 HSP90AA1P07900 732 aaKnown RBP19.08■□□□□ 0.64
RERE-204ENST00000400908 NEFMP07197 916 aa19.04■□□□□ 0.64
RERE-204ENST00000400908 TRIM52Q96A61 297 aa18.96■□□□□ 0.63
RERE-204ENST00000400908 CDK11BP21127 795 aaKnown RBP18.94■□□□□ 0.62
RERE-204ENST00000400908 UPF2Q9HAU5 1272 aaKnown RBP18.94■□□□□ 0.62
RERE-204ENST00000400908 CSRNP3Q8WYN3 585 aa18.93■□□□□ 0.62
RERE-204ENST00000400908 RB1CC1Q8TDY2 1594 aa18.92■□□□□ 0.62
RERE-204ENST00000400908 NEUROD1Q13562 356 aa18.9■□□□□ 0.62
RERE-204ENST00000400908 TNNT2P45379 298 aaPredicted RBP18.89■□□□□ 0.61
RERE-204ENST00000400908 FAM50AQ14320 339 aaKnown RBP18.88■□□□□ 0.61
RERE-204ENST00000400908 ZNF326Q5BKZ1 582 aaKnown RBP18.87■□□□□ 0.61
RERE-204ENST00000400908 NACADO15069 1562 aa18.83■□□□□ 0.6
RERE-204ENST00000400908 ARXQ96QS3 562 aa18.8■□□□□ 0.6
RERE-204ENST00000400908 RSF1Q96T23 1441 aaPredicted RBP18.79■□□□□ 0.6
RERE-204ENST00000400908 NBR1Q14596 966 aa18.76■□□□□ 0.59
RERE-204ENST00000400908 ACIN1Q9UKV3 1341 aaKnown RBP18.75■□□□□ 0.59
RERE-204ENST00000400908 DCAF1Q9Y4B6 1507 aa18.73■□□□□ 0.59
RERE-204ENST00000400908 P3H3Q8IVL6 736 aa18.71■□□□□ 0.59
RERE-204ENST00000400908 FBLN2P98095 1184 aa18.7■□□□□ 0.58
RERE-204ENST00000400908 TRIM44Q96DX7 344 aaPredicted RBP18.65■□□□□ 0.58
RERE-204ENST00000400908 FKBP8Q14318 412 aa18.65■□□□□ 0.58
RERE-204ENST00000400908 MYO15BQ96JP2 1530 aa18.62■□□□□ 0.57
RERE-204ENST00000400908 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.55■□□□□ 0.56
RERE-204ENST00000400908 ARID3CA6NKF2 412 aa18.55■□□□□ 0.56
RERE-204ENST00000400908 NCLP19338 710 aaKnown RBP18.54■□□□□ 0.56
RERE-204ENST00000400908 ANP32EQ9BTT0 268 aa18.54■□□□□ 0.56
RERE-204ENST00000400908 CCDC136Q96JN2 1154 aa18.49■□□□□ 0.55
RERE-204ENST00000400908 CECR2Q9BXF3 1484 aa18.49■□□□□ 0.55
RERE-204ENST00000400908 PTMAP06454 111 aaKnown RBP18.47■□□□□ 0.55
RERE-204ENST00000400908 DNTTIP2Q5QJE6 756 aaKnown RBP18.47■□□□□ 0.55
RERE-204ENST00000400908 BAZ1AQ9NRL2 1556 aaPredicted RBP18.46■□□□□ 0.55
RERE-204ENST00000400908 BAZ1BQ9UIG0 1483 aaKnown RBP18.46■□□□□ 0.55
RERE-204ENST00000400908 GOLGA6L22H0YM25 854 aa18.45■□□□□ 0.54
RERE-204ENST00000400908 HNRNPUQ00839 825 aaKnown RBP eCLIP18.42■□□□□ 0.54
RERE-204ENST00000400908 ZRSR1Q15695 479 aaKnown RBP18.42■□□□□ 0.54
RERE-204ENST00000400908 ERICH6BQ5W0A0 696 aa18.42■□□□□ 0.54
RERE-204ENST00000400908 BECN1Q14457 450 aa18.41■□□□□ 0.54
RERE-204ENST00000400908 NAP1L5Q96NT1 182 aaPredicted RBP18.4■□□□□ 0.54
RERE-204ENST00000400908 DDRGK1Q96HY6 314 aa18.4■□□□□ 0.54
RERE-204ENST00000400908 WRNQ14191 1432 aaPredicted RBP eCLIP18.38■□□□□ 0.53
RERE-204ENST00000400908 MYH16Q9H6N6 1097 aa18.37■□□□□ 0.53
RERE-204ENST00000400908 EEA1Q15075 1411 aa18.34■□□□□ 0.53
RERE-204ENST00000400908 CLIP1P30622 1438 aa18.34■□□□□ 0.53
RERE-204ENST00000400908 FAM9BQ8IZU0 186 aa18.33■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms