RNA–Protein interactions for RNA: ENST00000337907.7

RERE-201, Transcript of arginine-glutamic acid dipeptide repeats, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RERE, Length 8,026 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RERE-201ENST00000337907 DCAF8L2P0C7V8 631 aa21.29■■□□□ 1
RERE-201ENST00000337907 PELP1Q8IZL8 1130 aaKnown RBP20.87■□□□□ 0.93
RERE-201ENST00000337907 FAM9AQ8IZU1 332 aaPredicted RBP20.02■□□□□ 0.8
RERE-201ENST00000337907 SUPT5HO00267 1087 aaKnown RBP19.98■□□□□ 0.79
RERE-201ENST00000337907 APLP2Q06481 763 aa19.97■□□□□ 0.79
RERE-201ENST00000337907 ERICH6Q7L0X2 663 aa19.93■□□□□ 0.78
RERE-201ENST00000337907 CCER1Q8TC90 406 aaPredicted RBP19.91■□□□□ 0.78
RERE-201ENST00000337907 EHMT2Q96KQ7 1210 aa19.69■□□□□ 0.74
RERE-201ENST00000337907 CENPBP07199 599 aaPredicted RBP19.43■□□□□ 0.7
RERE-201ENST00000337907 SHROOM4Q9ULL8 1493 aa19.37■□□□□ 0.69
RERE-201ENST00000337907 MYT1Q01538 1121 aa19.26■□□□□ 0.67
RERE-201ENST00000337907 NEFLP07196 543 aa19.26■□□□□ 0.67
RERE-201ENST00000337907 ZEB1P37275 1124 aaPredicted RBP19.12■□□□□ 0.65
RERE-201ENST00000337907 TTBK1Q5TCY1 1321 aaPredicted RBP19.12■□□□□ 0.65
RERE-201ENST00000337907 PCGF6Q9BYE7 350 aa19.06■□□□□ 0.64
RERE-201ENST00000337907 DAXXQ9UER7 740 aaPredicted RBP19.06■□□□□ 0.64
RERE-201ENST00000337907 ATP1B4Q9UN42 357 aaPredicted RBP19.05■□□□□ 0.64
RERE-201ENST00000337907 YTHDC1Q96MU7 727 aaKnown RBP19.03■□□□□ 0.64
RERE-201ENST00000337907 RANGAP1P46060 587 aaPredicted RBP18.9■□□□□ 0.62
RERE-201ENST00000337907 NISCHQ9Y2I1 1504 aa18.86■□□□□ 0.61
RERE-201ENST00000337907 UBTFP17480 764 aaKnown RBP18.65■□□□□ 0.58
RERE-201ENST00000337907 MYT1LQ9UL68 1186 aa18.62■□□□□ 0.57
RERE-201ENST00000337907 TRIM41Q8WV44 630 aa18.61■□□□□ 0.57
RERE-201ENST00000337907 ZNF316A6NFI3 1004 aaPredicted RBP18.52■□□□□ 0.56
RERE-201ENST00000337907 POLR3GLQ9BT43 218 aa18.45■□□□□ 0.54
RERE-201ENST00000337907 RTL5Q5HYW3 569 aaPredicted RBP18.42■□□□□ 0.54
RERE-201ENST00000337907 CLSPNQ9HAW4 1339 aa18.37■□□□□ 0.53
RERE-201ENST00000337907 SLC4A1APQ9BWU0 796 aaKnown RBP18.36■□□□□ 0.53
RERE-201ENST00000337907 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.32■□□□□ 0.52
RERE-201ENST00000337907 HNRNPUL2Q1KMD3 747 aaKnown RBP18.32■□□□□ 0.52
RERE-201ENST00000337907 CHIC1Q5VXU3 224 aa18.21■□□□□ 0.51
RERE-201ENST00000337907 ZBTB47Q9UFB7 747 aaPredicted RBP18.16■□□□□ 0.5
RERE-201ENST00000337907 ITGAEP38570 1179 aa18.12■□□□□ 0.49
RERE-201ENST00000337907 CNGB1Q14028 1251 aaPredicted RBP18.09■□□□□ 0.49
RERE-201ENST00000337907 TRIM26Q12899 539 aaPredicted RBP18.06■□□□□ 0.48
RERE-201ENST00000337907 PPARGC1BQ86YN6 1023 aaKnown RBP17.99■□□□□ 0.47
RERE-201ENST00000337907 SLC24A1O60721 1099 aa17.87■□□□□ 0.45
RERE-201ENST00000337907 HRCP23327 699 aa17.84■□□□□ 0.45
RERE-201ENST00000337907 NEFMP07197 916 aa17.83■□□□□ 0.44
RERE-201ENST00000337907 CANXP27824 592 aaKnown RBP17.81■□□□□ 0.44
RERE-201ENST00000337907 CDK11AQ9UQ88 783 aaPredicted RBP17.77■□□□□ 0.44
RERE-201ENST00000337907 ANP32BQ92688 251 aaKnown RBP17.75■□□□□ 0.43
RERE-201ENST00000337907 TRIM52Q96A61 297 aa17.7■□□□□ 0.42
RERE-201ENST00000337907 FAM50AQ14320 339 aaKnown RBP17.67■□□□□ 0.42
RERE-201ENST00000337907 DIEXFQ68CQ4 756 aaKnown RBP17.65■□□□□ 0.42
RERE-201ENST00000337907 BCL11AQ9H165 835 aa17.64■□□□□ 0.41
RERE-201ENST00000337907 ANP32CO43423 234 aa17.63■□□□□ 0.41
RERE-201ENST00000337907 BCANQ96GW7 911 aa17.63■□□□□ 0.41
RERE-201ENST00000337907 ANP32AP39687 249 aaKnown RBP17.59■□□□□ 0.41
RERE-201ENST00000337907 GLIPR1L2Q4G1C9 344 aa17.54■□□□□ 0.4
RERE-201ENST00000337907 HSP90AA1P07900 732 aaKnown RBP17.53■□□□□ 0.4
RERE-201ENST00000337907 ZNF326Q5BKZ1 582 aaKnown RBP17.52■□□□□ 0.39
RERE-201ENST00000337907 NEUROD1Q13562 356 aa17.51■□□□□ 0.39
RERE-201ENST00000337907 CDK11BP21127 795 aaKnown RBP17.49■□□□□ 0.39
RERE-201ENST00000337907 UPF2Q9HAU5 1272 aaKnown RBP17.45■□□□□ 0.38
RERE-201ENST00000337907 EIF5BO60841 1220 aaKnown RBP17.37■□□□□ 0.37
RERE-201ENST00000337907 ESF1Q9H501 851 aaKnown RBP17.35■□□□□ 0.37
RERE-201ENST00000337907 NPM2Q86SE8 214 aaKnown RBP17.31■□□□□ 0.36
RERE-201ENST00000337907 LOC105371045A0A1W2PR82 267 aa17.27■□□□□ 0.35
RERE-201ENST00000337907 GTF3C3Q9Y5Q9 886 aa17.25■□□□□ 0.35
RERE-201ENST00000337907 FBLN2P98095 1184 aa17.22■□□□□ 0.35
RERE-201ENST00000337907 STAG3Q9UJ98 1225 aa17.21■□□□□ 0.35
RERE-201ENST00000337907 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.13■□□□□ 0.33
RERE-201ENST00000337907 MYH16Q9H6N6 1097 aa17.09■□□□□ 0.33
RERE-201ENST00000337907 NCLP19338 710 aaKnown RBP17.03■□□□□ 0.32
RERE-201ENST00000337907 TNNT2P45379 298 aaPredicted RBP17.03■□□□□ 0.32
RERE-201ENST00000337907 CHGAP10645 457 aaKnown RBP17.01■□□□□ 0.31
RERE-201ENST00000337907 ZNF777Q9ULD5 760 aaPredicted RBP17.01■□□□□ 0.31
RERE-201ENST00000337907 SCAF1Q9H7N4 1312 aaKnown RBP16.99■□□□□ 0.31
RERE-201ENST00000337907 ZRSR1Q15695 479 aaKnown RBP16.98■□□□□ 0.31
RERE-201ENST00000337907 PLPPR3Q6T4P5 718 aa16.96■□□□□ 0.31
RERE-201ENST00000337907 ANP32EQ9BTT0 268 aa16.96■□□□□ 0.31
RERE-201ENST00000337907 WDR43Q15061 677 aaKnown RBP eCLIP16.95■□□□□ 0.3
RERE-201ENST00000337907 TRIM44Q96DX7 344 aaPredicted RBP16.95■□□□□ 0.3
RERE-201ENST00000337907 A0A0G2JS52 829 aa16.95■□□□□ 0.3
RERE-201ENST00000337907 ARXQ96QS3 562 aa16.95■□□□□ 0.3
RERE-201ENST00000337907 TONSLQ96HA7 1378 aa16.94■□□□□ 0.3
RERE-201ENST00000337907 GOLGA6L22H0YM25 854 aa16.92■□□□□ 0.3
RERE-201ENST00000337907 NPM1P06748 294 aaKnown RBP eCLIP16.91■□□□□ 0.3
RERE-201ENST00000337907 BECN1Q14457 450 aa16.91■□□□□ 0.3
RERE-201ENST00000337907 FKBP8Q14318 412 aa16.91■□□□□ 0.3
RERE-201ENST00000337907 CCDC136Q96JN2 1154 aa16.9■□□□□ 0.3
RERE-201ENST00000337907 NBR1Q14596 966 aa16.88■□□□□ 0.29
RERE-201ENST00000337907 HNRNPUQ00839 825 aaKnown RBP eCLIP16.87■□□□□ 0.29
RERE-201ENST00000337907 TMC1Q8TDI8 760 aa16.87■□□□□ 0.29
RERE-201ENST00000337907 ARID3CA6NKF2 412 aa16.86■□□□□ 0.29
RERE-201ENST00000337907 DDRGK1Q96HY6 314 aa16.85■□□□□ 0.29
RERE-201ENST00000337907 CASC1Q6TDU7 716 aa16.85■□□□□ 0.29
RERE-201ENST00000337907 ACIN1Q9UKV3 1341 aaKnown RBP16.84■□□□□ 0.29
RERE-201ENST00000337907 FAM9BQ8IZU0 186 aa16.84■□□□□ 0.29
RERE-201ENST00000337907 PTMAP06454 111 aaKnown RBP16.8■□□□□ 0.28
RERE-201ENST00000337907 GOLGA6L6A8MZA4 724 aa16.8■□□□□ 0.28
RERE-201ENST00000337907 TULP1O00294 542 aaPredicted RBP16.8■□□□□ 0.28
RERE-201ENST00000337907 P3H3Q8IVL6 736 aa16.79■□□□□ 0.28
RERE-201ENST00000337907 SALL2Q9Y467 1007 aaPredicted RBP16.79■□□□□ 0.28
RERE-201ENST00000337907 DNTTIP2Q5QJE6 756 aaKnown RBP16.77■□□□□ 0.28
RERE-201ENST00000337907 ZBTB7CA1YPR0 619 aa16.73■□□□□ 0.27
RERE-201ENST00000337907 C14orf37Q86TY3 774 aa16.73■□□□□ 0.27
RERE-201ENST00000337907 PABPN1Q86U42 306 aaKnown RBP eCLIP16.72■□□□□ 0.27
RERE-201ENST00000337907 HAP1P54257 671 aaPredicted RBP16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms