RNA–Protein interactions for RNA: ENST00000566809.1

PKM-217, Transcript of pyruvate kinase M1/2, humanhuman

TSL 4

Gene PKM, Length 560 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKM-217ENST00000566809 NISCHQ9Y2I1 1504 aa47.73■■■■■ 5.23
PKM-217ENST00000566809 CCDC180Q9P1Z9 1646 aa42.24■■■■■ 4.35
PKM-217ENST00000566809 ABCC9O60706 1549 aa40.79■■■■■ 4.12
PKM-217ENST00000566809 ZCCHC6Q5VYS8 1495 aaKnown RBP39.84■■■■□ 3.97
PKM-217ENST00000566809 DCAF8L2P0C7V8 631 aa39.84■■■■□ 3.97
PKM-217ENST00000566809 NACADO15069 1562 aa39.65■■■■□ 3.94
PKM-217ENST00000566809 RB1CC1Q8TDY2 1594 aa39.58■■■■□ 3.93
PKM-217ENST00000566809 MYO15BQ96JP2 1530 aa39.57■■■■□ 3.93
PKM-217ENST00000566809 DCAF1Q9Y4B6 1507 aa39.57■■■■□ 3.93
PKM-217ENST00000566809 SCRIBQ14160 1630 aa38.52■■■■□ 3.76
PKM-217ENST00000566809 UNC13AQ9UPW8 1703 aa38.43■■■■□ 3.74
PKM-217ENST00000566809 PABPN1Q86U42 306 aaKnown RBP eCLIP38.21■■■■□ 3.71
PKM-217ENST00000566809 BICRAQ9NZM4 1560 aa38.13■■■■□ 3.69
PKM-217ENST00000566809 SHROOM4Q9ULL8 1493 aa38.05■■■■□ 3.68
PKM-217ENST00000566809 EIF4G1Q04637 1599 aaKnown RBP37.2■■■■□ 3.55
PKM-217ENST00000566809 BAZ1AQ9NRL2 1556 aaPredicted RBP37.04■■■■□ 3.52
PKM-217ENST00000566809 CECR2Q9BXF3 1484 aa37.01■■■■□ 3.52
PKM-217ENST00000566809 SMARCA4P51532 1647 aa36.9■■■■□ 3.5
PKM-217ENST00000566809 CC2D2AQ9P2K1 1620 aa36.9■■■■□ 3.5
PKM-217ENST00000566809 DNAJC5BQ9UF47 199 aa36.82■■■■□ 3.48
PKM-217ENST00000566809 MROH2BQ7Z745 1585 aa36.72■■■■□ 3.47
PKM-217ENST00000566809 SMARCA2P51531 1590 aa36.69■■■■□ 3.46
PKM-217ENST00000566809 ATAD2BQ9ULI0 1458 aa36.6■■■■□ 3.45
PKM-217ENST00000566809 PEG3Q9GZU2 1588 aa36.54■■■■□ 3.44
PKM-217ENST00000566809 RSF1Q96T23 1441 aaPredicted RBP36.54■■■■□ 3.44
PKM-217ENST00000566809 NCAPD3P42695 1498 aa36.54■■■■□ 3.44
PKM-217ENST00000566809 BAZ1BQ9UIG0 1483 aaKnown RBP36.41■■■■□ 3.42
PKM-217ENST00000566809 HMGXB3Q12766 1538 aa36.4■■■■□ 3.42
PKM-217ENST00000566809 WIZO95785 1651 aa36.34■■■■□ 3.41
PKM-217ENST00000566809 SUPT5HO00267 1087 aaKnown RBP36.13■■■■□ 3.37
PKM-217ENST00000566809 TOP2AP11388 1531 aaKnown RBP36.08■■■■□ 3.37
PKM-217ENST00000566809 CCDC88BA6NC98 1476 aa35.63■■■■□ 3.29
PKM-217ENST00000566809 CADPSQ9ULU8 1353 aa35.53■■■■□ 3.28
PKM-217ENST00000566809 LAMC3Q9Y6N6 1575 aa35.52■■■■□ 3.28
PKM-217ENST00000566809 CFTRP13569 1480 aa35.38■■■■□ 3.25
PKM-217ENST00000566809 NESP48681 1621 aa35.36■■■■□ 3.25
PKM-217ENST00000566809 PDS5BQ9NTI5 1447 aa35.36■■■■□ 3.25
PKM-217ENST00000566809 ERCC6Q03468 1493 aa35.28■■■■□ 3.24
PKM-217ENST00000566809 PRDM2Q13029 1718 aa35.13■■■■□ 3.21
PKM-217ENST00000566809 FANCD2Q9BXW9 1451 aa35.1■■■■□ 3.21
PKM-217ENST00000566809 CEP164Q9UPV0 1460 aa35.06■■■■□ 3.2
PKM-217ENST00000566809 KIF21AQ7Z4S6 1674 aa34.98■■■■□ 3.19
PKM-217ENST00000566809 MRC2Q9UBG0 1479 aa34.87■■■■□ 3.17
PKM-217ENST00000566809 ABCC8Q09428 1581 aa34.78■■■■□ 3.16
PKM-217ENST00000566809 THOC2Q8NI27 1593 aaKnown RBP34.73■■■■□ 3.15
PKM-217ENST00000566809 WDR62O43379 1518 aa34.67■■■■□ 3.14
PKM-217ENST00000566809 CUX2O14529 1486 aa34.67■■■■□ 3.14
PKM-217ENST00000566809 URB2Q14146 1524 aaKnown RBP34.61■■■■□ 3.13
PKM-217ENST00000566809 DNMBPQ6XZF7 1577 aa34.6■■■■□ 3.13
PKM-217ENST00000566809 TOPBP1Q92547 1522 aa34.56■■■■□ 3.12
PKM-217ENST00000566809 WRNQ14191 1432 aaPredicted RBP eCLIP34.53■■■■□ 3.12
PKM-217ENST00000566809 CUX1P39880 1505 aa34.44■■■■□ 3.1
PKM-217ENST00000566809 TOP2BQ02880 1626 aa34.33■■■■□ 3.09
PKM-217ENST00000566809 IFT140Q96RY7 1462 aa34.31■■■■□ 3.08
PKM-217ENST00000566809 BIVM-ERCC5R4GMW8 1640 aa34.3■■■■□ 3.08
PKM-217ENST00000566809 POLA1P09884 1462 aaPredicted RBP34.29■■■■□ 3.08
PKM-217ENST00000566809 FGD5Q6ZNL6 1462 aa34.29■■■■□ 3.08
PKM-217ENST00000566809 SOGA1O94964 1423 aa34.26■■■■□ 3.07
PKM-217ENST00000566809 SYNJ1O43426 1573 aa34.26■■■■□ 3.07
PKM-217ENST00000566809 TRIM41Q8WV44 630 aa34.19■■■■□ 3.06
PKM-217ENST00000566809 RAD54L2Q9Y4B4 1467 aa34.09■■■■□ 3.05
PKM-217ENST00000566809 TARBP1Q13395 1621 aaKnown RBP34.08■■■■□ 3.05
PKM-217ENST00000566809 WDR97A6NE52 1622 aa34.02■■■■□ 3.04
PKM-217ENST00000566809 ABCA10Q8WWZ4 1543 aa34.02■■■■□ 3.04
PKM-217ENST00000566809 CHIC1Q5VXU3 224 aa33.95■■■■□ 3.03
PKM-217ENST00000566809 ZNF608Q9ULD9 1512 aaPredicted RBP33.94■■■■□ 3.02
PKM-217ENST00000566809 TDRD9Q8NDG6 1382 aaKnown RBP33.93■■■■□ 3.02
PKM-217ENST00000566809 AQRO60306 1485 aaKnown RBP eCLIP33.88■■■■□ 3.017e-15■■■■■ 45.3
PKM-217ENST00000566809 EIF4G3O43432 1585 aaKnown RBP33.87■■■■□ 3.01
PKM-217ENST00000566809 GAPVD1Q14C86 1478 aa33.85■■■■□ 3.01
PKM-217ENST00000566809 KIF27Q86VH2 1401 aa33.85■■■■□ 3.01
PKM-217ENST00000566809 GRIN2BQ13224 1484 aa33.8■■■■□ 3
PKM-217ENST00000566809 ABCA5Q8WWZ7 1642 aa33.76■■■■□ 3
PKM-217ENST00000566809 ERICH3Q5RHP9 1530 aa33.66■■■□□ 2.98
PKM-217ENST00000566809 MAGI1Q96QZ7 1491 aaPredicted RBP33.66■■■□□ 2.98
PKM-217ENST00000566809 PBRM1Q86U86 1689 aa33.65■■■□□ 2.98
PKM-217ENST00000566809 SNAPC4Q5SXM2 1469 aa33.6■■■□□ 2.97
PKM-217ENST00000566809 EEA1Q15075 1411 aa33.6■■■□□ 2.97
PKM-217ENST00000566809 CHMP7Q8WUX9 453 aaPredicted RBP33.56■■■□□ 2.96
PKM-217ENST00000566809 FBLN2P98095 1184 aa33.55■■■□□ 2.96
PKM-217ENST00000566809 IGF1RP08069 1367 aa33.52■■■□□ 2.96
PKM-217ENST00000566809 FHAD1B1AJZ9 1412 aa33.51■■■□□ 2.95
PKM-217ENST00000566809 SYNJ2O15056 1496 aa33.5■■■□□ 2.95
PKM-217ENST00000566809 CUL7Q14999 1698 aa33.46■■■□□ 2.95
PKM-217ENST00000566809 RUSC2Q8N2Y8 1516 aa33.43■■■□□ 2.94
PKM-217ENST00000566809 ADAMTS12P58397 1594 aa33.43■■■□□ 2.94
PKM-217ENST00000566809 CSRNP3Q8WYN3 585 aa33.42■■■□□ 2.94
PKM-217ENST00000566809 OSCARQ8IYS5 282 aa33.41■■■□□ 2.94
PKM-217ENST00000566809 CARMIL1Q5VZK9 1371 aa33.41■■■□□ 2.94
PKM-217ENST00000566809 FAM9AQ8IZU1 332 aaPredicted RBP33.35■■■□□ 2.93
PKM-217ENST00000566809 CHD1O14646 1710 aa33.32■■■□□ 2.92
PKM-217ENST00000566809 GRIN2AQ12879 1464 aa33.31■■■□□ 2.92
PKM-217ENST00000566809 RAPGEF2Q9Y4G8 1499 aa33.27■■■□□ 2.92
PKM-217ENST00000566809 PRXQ9BXM0 1461 aa33.18■■■□□ 2.9
PKM-217ENST00000566809 NUP160Q12769 1436 aa33.11■■■□□ 2.89
PKM-217ENST00000566809 KIF21BO75037 1637 aa33.05■■■□□ 2.88
PKM-217ENST00000566809 CEP170Q5SW79 1584 aa33.02■■■□□ 2.88
PKM-217ENST00000566809 KIAA0586Q9BVV6 1533 aa33■■■□□ 2.87
PKM-217ENST00000566809 CLASP1Q7Z460 1538 aa32.97■■■□□ 2.87
PKM-217ENST00000566809 DNAJC5Q9H3Z4 198 aa32.97■■■□□ 2.87
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms